RNA–Protein interactions for RNA: ENST00000513988.1

CLDND1-229, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-229ENST00000513988 DNERQ8NFT8 737 aa9.01□□□□□ -0.97
CLDND1-229ENST00000513988 STAG1Q8WVM7 1258 aa9.01□□□□□ -0.97
CLDND1-229ENST00000513988 EMID1Q96A84 441 aaPredicted RBP9.01□□□□□ -0.97
CLDND1-229ENST00000513988 LRIG1Q96JA1 1093 aa9.01□□□□□ -0.97
CLDND1-229ENST00000513988 ZNF512BQ96KM6 892 aaPredicted RBP9.01□□□□□ -0.97
CLDND1-229ENST00000513988 MTF2Q9Y483 593 aaPredicted RBP9.01□□□□□ -0.97
CLDND1-229ENST00000513988 TICRRQ7Z2Z1 1910 aa9.01□□□□□ -0.97
CLDND1-229ENST00000513988 GREB1LQ9C091 1923 aaPredicted RBP9.01□□□□□ -0.97
CLDND1-229ENST00000513988 BAZ2AQ9UIF9 1905 aaKnown RBP9.01□□□□□ -0.97
CLDND1-229ENST00000513988 PTPRCP08575 1304 aa9.01□□□□□ -0.97
CLDND1-229ENST00000513988 GREB1Q4ZG55 1949 aa9□□□□□ -0.97
CLDND1-229ENST00000513988 C2orf71A6NGG8 1288 aa9□□□□□ -0.97
CLDND1-229ENST00000513988 TBKBP1A7MCY6 615 aa9□□□□□ -0.97
CLDND1-229ENST00000513988 SRGAP3O43295 1099 aa9□□□□□ -0.97
CLDND1-229ENST00000513988 ICAM1P05362 532 aa9□□□□□ -0.97
CLDND1-229ENST00000513988 GNAT1P11488 350 aa9□□□□□ -0.97
CLDND1-229ENST00000513988 EPCAMP16422 314 aa9□□□□□ -0.97
CLDND1-229ENST00000513988 LAG3P18627 525 aa9□□□□□ -0.97
CLDND1-229ENST00000513988 HOXC8P31273 242 aa9□□□□□ -0.97
CLDND1-229ENST00000513988 KRT17Q04695 432 aa9□□□□□ -0.97
CLDND1-229ENST00000513988 SNW1Q13573 536 aaKnown RBP9□□□□□ -0.97
CLDND1-229ENST00000513988 PPP2R5DQ14738 602 aa9□□□□□ -0.97
CLDND1-229ENST00000513988 ZBTB41Q5SVQ8 909 aa9□□□□□ -0.97
CLDND1-229ENST00000513988 KIAA1211LQ6NV74 962 aa9□□□□□ -0.97
CLDND1-229ENST00000513988 RNF207Q6ZRF8 634 aa9□□□□□ -0.97
CLDND1-229ENST00000513988 GMCL1P1Q8NEA9 526 aa9□□□□□ -0.97
CLDND1-229ENST00000513988 FEZF2Q8TBJ5 459 aa9□□□□□ -0.97
CLDND1-229ENST00000513988 MKNK1Q9BUB5 465 aa9□□□□□ -0.97
CLDND1-229ENST00000513988 SFXN1Q9H9B4 322 aa9□□□□□ -0.97
CLDND1-229ENST00000513988 VPS9D1Q9Y2B5 631 aa9□□□□□ -0.97
CLDND1-229ENST00000513988 MSRB2Q9Y3D2 182 aa9□□□□□ -0.97
CLDND1-229ENST00000513988 ACACAQ13085 2346 aa9□□□□□ -0.97
CLDND1-229ENST00000513988 LAMA1P25391 3075 aa9□□□□□ -0.97
CLDND1-229ENST00000513988 SDK1Q7Z5N4 2213 aa8.99□□□□□ -0.97
CLDND1-229ENST00000513988 NCAM2O15394 837 aa8.99□□□□□ -0.97
CLDND1-229ENST00000513988 N4BP1O75113 896 aaKnown RBP8.99□□□□□ -0.97
CLDND1-229ENST00000513988 PPFIA4O75335 1185 aa8.99□□□□□ -0.97
CLDND1-229ENST00000513988 C1QL1O75973 258 aa8.99□□□□□ -0.97
CLDND1-229ENST00000513988 NTRK1P04629 796 aa8.99□□□□□ -0.97
CLDND1-229ENST00000513988 PRKCQQ04759 706 aa8.99□□□□□ -0.97
CLDND1-229ENST00000513988 BMS1Q14692 1282 aaKnown RBP8.99□□□□□ -0.97
CLDND1-229ENST00000513988 RNF43Q68DV7 783 aa8.99□□□□□ -0.97
CLDND1-229ENST00000513988 TSHZ1Q6ZSZ6 1077 aa8.99□□□□□ -0.97
CLDND1-229ENST00000513988 RTN4RL1Q86UN2 441 aaPredicted RBP8.99□□□□□ -0.97
CLDND1-229ENST00000513988 LCORLQ8N3X6 602 aa8.99□□□□□ -0.97
CLDND1-229ENST00000513988 HNRNPLLQ8WVV9 542 aaKnown RBP8.99□□□□□ -0.97
CLDND1-229ENST00000513988 STAMQ92783 540 aa8.99□□□□□ -0.97
CLDND1-229ENST00000513988 GLG1Q92896 1179 aa8.99□□□□□ -0.97
CLDND1-229ENST00000513988 CHMP4CQ96CF2 233 aa8.99□□□□□ -0.97
CLDND1-229ENST00000513988 KCTD12Q96CX2 325 aaKnown RBP8.99□□□□□ -0.97
CLDND1-229ENST00000513988 DDX23Q9BUQ8 820 aaKnown RBP8.99□□□□□ -0.97
CLDND1-229ENST00000513988 FTHL17Q9BXU8 183 aa8.99□□□□□ -0.97
CLDND1-229ENST00000513988 CCDC8Q9H0W5 538 aaPredicted RBP8.99□□□□□ -0.97
CLDND1-229ENST00000513988 RNPEPQ9H4A4 650 aa8.99□□□□□ -0.97
CLDND1-229ENST00000513988 BCAS3Q9H6U6 928 aa8.99□□□□□ -0.97
CLDND1-229ENST00000513988 LTB4R2Q9NPC1 389 aa8.99□□□□□ -0.97
CLDND1-229ENST00000513988 ATP8A2Q9NTI2 1148 aa8.99□□□□□ -0.97
CLDND1-229ENST00000513988 TYW1Q9NV66 732 aaKnown RBP8.99□□□□□ -0.97
CLDND1-229ENST00000513988 EPS15L1Q9UBC2 864 aa8.99□□□□□ -0.97
CLDND1-229ENST00000513988 HCSTQ9UBK5 93 aa8.99□□□□□ -0.97
CLDND1-229ENST00000513988 SYNPO2Q9UMS6 1093 aa8.99□□□□□ -0.97
CLDND1-229ENST00000513988 NRCAMQ92823 1304 aa8.99□□□□□ -0.97
CLDND1-229ENST00000513988 HYAL3O43820 417 aaPredicted RBP8.98□□□□□ -0.97
CLDND1-229ENST00000513988 ZNF806P0C7X5 589 aa8.98□□□□□ -0.97
CLDND1-229ENST00000513988 TDGF1P13385 188 aa8.98□□□□□ -0.97
CLDND1-229ENST00000513988 PPM1AP35813 382 aa8.98□□□□□ -0.97
CLDND1-229ENST00000513988 RPS9P46781 194 aaKnown RBP8.98□□□□□ -0.97
CLDND1-229ENST00000513988 RARSP54136 660 aaKnown RBP8.98□□□□□ -0.97
CLDND1-229ENST00000513988 RPS6P62753 249 aaKnown RBP8.98□□□□□ -0.97
CLDND1-229ENST00000513988 ATP8B2P98198 1209 aa8.98□□□□□ -0.97
CLDND1-229ENST00000513988 G3BP1Q13283 466 aaKnown RBP eCLIP8.98□□□□□ -0.97
CLDND1-229ENST00000513988 MLF2Q15773 248 aaPredicted RBP8.98□□□□□ -0.97
CLDND1-229ENST00000513988 FBXO47Q5MNV8 452 aa8.98□□□□□ -0.97
CLDND1-229ENST00000513988 SH3PXD2AQ5TCZ1 1133 aa8.98□□□□□ -0.97
CLDND1-229ENST00000513988 MKL1Q969V6 931 aa8.98□□□□□ -0.97
CLDND1-229ENST00000513988 ZDHHC16Q969W1 377 aa8.98□□□□□ -0.97
CLDND1-229ENST00000513988 CLDN23Q96B33 292 aa8.98□□□□□ -0.97
CLDND1-229ENST00000513988 DDRGK1Q96HY6 314 aa8.98□□□□□ -0.97
CLDND1-229ENST00000513988 USP26Q9BXU7 913 aa8.98□□□□□ -0.97
CLDND1-229ENST00000513988 CLMPQ9H6B4 373 aa8.98□□□□□ -0.97
CLDND1-229ENST00000513988 ANTXR1Q9H6X2 564 aa8.98□□□□□ -0.97
CLDND1-229ENST00000513988 SETD4Q9NVD3 440 aa8.98□□□□□ -0.97
CLDND1-229ENST00000513988 DDX41Q9UJV9 622 aaKnown RBP8.98□□□□□ -0.97
CLDND1-229ENST00000513988 PRR12Q9ULL5 1215 aa8.98□□□□□ -0.97
CLDND1-229ENST00000513988 PCDHB7Q9Y5E2 793 aa8.98□□□□□ -0.97
CLDND1-229ENST00000513988 FNDC1Q4ZHG4 1894 aaPredicted RBP8.98□□□□□ -0.97
CLDND1-229ENST00000513988 C2orf16Q68DN1 1984 aa8.97□□□□□ -0.97
CLDND1-229ENST00000513988 H3BRB1 525 aa8.97□□□□□ -0.97
CLDND1-229ENST00000513988 DPYSL4O14531 572 aa8.97□□□□□ -0.97
CLDND1-229ENST00000513988 PRKAB2O43741 272 aa8.97□□□□□ -0.97
CLDND1-229ENST00000513988 PLA2G6O60733 806 aa8.97□□□□□ -0.97
CLDND1-229ENST00000513988 CXCL14O95715 111 aa8.97□□□□□ -0.97
CLDND1-229ENST00000513988 RASA1P20936 1047 aa8.97□□□□□ -0.97
CLDND1-229ENST00000513988 CD72P21854 359 aa8.97□□□□□ -0.97
CLDND1-229ENST00000513988 CD52P31358 61 aa8.97□□□□□ -0.97
CLDND1-229ENST00000513988 SLC1A4P43007 532 aa8.97□□□□□ -0.97
CLDND1-229ENST00000513988 SRSF1Q07955 248 aaKnown RBP eCLIP8.97□□□□□ -0.97
CLDND1-229ENST00000513988 MTAPQ13126 283 aa8.97□□□□□ -0.97
CLDND1-229ENST00000513988 TNNI3KQ59H18 835 aa8.97□□□□□ -0.97
CLDND1-229ENST00000513988 SLC9C2Q5TAH2 1124 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms