RNA–Protein interactions for RNA: ENST00000513318.1

HMGXB3-204, Transcript of HMG-box containing 3, humanhuman

TSL 3

Gene HMGXB3, Length 749 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-204ENST00000513318 KRTAP3-2Q9BYR7 98 aa8.5□□□□□ -1.05
HMGXB3-204ENST00000513318 NT5C3AQ9H0P0 336 aa8.5□□□□□ -1.05
HMGXB3-204ENST00000513318 C11orf49Q9H6J7 331 aa8.5□□□□□ -1.05
HMGXB3-204ENST00000513318 ZSWIM4Q9H7M6 989 aa8.5□□□□□ -1.05
HMGXB3-204ENST00000513318 CDHR5Q9HBB8 845 aa8.5□□□□□ -1.05
HMGXB3-204ENST00000513318 TUFT1Q9NNX1 390 aa8.5□□□□□ -1.05
HMGXB3-204ENST00000513318 GABBR1Q9UBS5 961 aa8.5□□□□□ -1.05
HMGXB3-204ENST00000513318 MAFBQ9Y5Q3 323 aaPredicted RBP8.5□□□□□ -1.05
HMGXB3-204ENST00000513318 COL1A2P08123 1366 aa8.49□□□□□ -1.05
HMGXB3-204ENST00000513318 MICAL3Q7RTP6 2002 aa8.49□□□□□ -1.05
HMGXB3-204ENST00000513318 CCDC85CA6NKD9 419 aa8.49□□□□□ -1.05
HMGXB3-204ENST00000513318 HBP1O60381 514 aa8.49□□□□□ -1.05
HMGXB3-204ENST00000513318 LYPLA2O95372 231 aa8.49□□□□□ -1.05
HMGXB3-204ENST00000513318 OATP04181 439 aa8.49□□□□□ -1.05
HMGXB3-204ENST00000513318 COL6A1P12109 1028 aa8.49□□□□□ -1.05
HMGXB3-204ENST00000513318 EN2P19622 333 aaPredicted RBP8.49□□□□□ -1.05
HMGXB3-204ENST00000513318 COL9A1P20849 921 aa8.49□□□□□ -1.05
HMGXB3-204ENST00000513318 MARK3P27448 753 aa8.49□□□□□ -1.05
HMGXB3-204ENST00000513318 RPA1P27694 616 aa8.49□□□□□ -1.05
HMGXB3-204ENST00000513318 CCT6AP40227 531 aaKnown RBP8.49□□□□□ -1.05
HMGXB3-204ENST00000513318 PBX2P40425 430 aa8.49□□□□□ -1.05
HMGXB3-204ENST00000513318 UBA7P41226 1012 aa8.49□□□□□ -1.05
HMGXB3-204ENST00000513318 ME1P48163 572 aa8.49□□□□□ -1.05
HMGXB3-204ENST00000513318 SOX10P56693 466 aa8.49□□□□□ -1.05
HMGXB3-204ENST00000513318 PRKCEQ02156 737 aa8.49□□□□□ -1.05
HMGXB3-204ENST00000513318 PTPN11Q06124 597 aaPredicted RBP8.49□□□□□ -1.05
HMGXB3-204ENST00000513318 ITGA7Q13683 1181 aa8.49□□□□□ -1.05
HMGXB3-204ENST00000513318 KIAA0753Q2KHM9 967 aa8.49□□□□□ -1.05
HMGXB3-204ENST00000513318 HYIQ5T013 277 aa8.49□□□□□ -1.05
HMGXB3-204ENST00000513318 DMRTA1Q5VZB9 504 aa8.49□□□□□ -1.05
HMGXB3-204ENST00000513318 NFRKBQ6P4R8 1299 aa8.49□□□□□ -1.05
HMGXB3-204ENST00000513318 SESTD1Q86VW0 696 aa8.49□□□□□ -1.05
HMGXB3-204ENST00000513318 CATSPER3Q86XQ3 398 aa8.49□□□□□ -1.05
HMGXB3-204ENST00000513318 C4orf19Q8IY42 314 aa8.49□□□□□ -1.05
HMGXB3-204ENST00000513318 CKAP2LQ8IYA6 745 aa8.49□□□□□ -1.05
HMGXB3-204ENST00000513318 KCTD17Q8N5Z5 321 aa8.49□□□□□ -1.05
HMGXB3-204ENST00000513318 TET1Q8NFU7 2136 aa8.49□□□□□ -1.05
HMGXB3-204ENST00000513318 DIS3LQ8TF46 1054 aaKnown RBP8.49□□□□□ -1.05
HMGXB3-204ENST00000513318 ATP8B4Q8TF62 1192 aa8.49□□□□□ -1.05
HMGXB3-204ENST00000513318 DYDC2Q96IM9 177 aa8.49□□□□□ -1.05
HMGXB3-204ENST00000513318 PAWRQ96IZ0 340 aaKnown RBP8.49□□□□□ -1.05
HMGXB3-204ENST00000513318 CLIC6Q96NY7 704 aa8.49□□□□□ -1.05
HMGXB3-204ENST00000513318 HSD17B14Q9BPX1 270 aa8.49□□□□□ -1.05
HMGXB3-204ENST00000513318 CCSER1Q9C0I3 900 aa8.49□□□□□ -1.05
HMGXB3-204ENST00000513318 SENP6Q9GZR1 1112 aaPredicted RBP8.49□□□□□ -1.05
HMGXB3-204ENST00000513318 CSRNP2Q9H175 543 aa8.49□□□□□ -1.05
HMGXB3-204ENST00000513318 RGL1Q9NZL6 768 aa8.49□□□□□ -1.05
HMGXB3-204ENST00000513318 GTF2IRD1Q9UHL9 959 aa8.49□□□□□ -1.05
HMGXB3-204ENST00000513318 PCDHA7Q9UN72 937 aa8.49□□□□□ -1.05
HMGXB3-204ENST00000513318 MROH7Q68CQ1 1323 aa8.49□□□□□ -1.05
HMGXB3-204ENST00000513318 MKI67P46013 3256 aaKnown RBP8.49□□□□□ -1.05
HMGXB3-204ENST00000513318 PDE4DIPQ5VU43 2346 aa8.48□□□□□ -1.05
HMGXB3-204ENST00000513318 PP2D1A8MPX8 630 aa8.48□□□□□ -1.05
HMGXB3-204ENST00000513318 ZNF862O60290 1169 aa8.48□□□□□ -1.05
HMGXB3-204ENST00000513318 MED24O75448 989 aa8.48□□□□□ -1.05
HMGXB3-204ENST00000513318 SLITRK3O94933 977 aa8.48□□□□□ -1.05
HMGXB3-204ENST00000513318 SPATA31C1P0DKV0 1188 aa8.48□□□□□ -1.05
HMGXB3-204ENST00000513318 ATP4AP20648 1035 aa8.48□□□□□ -1.05
HMGXB3-204ENST00000513318 PSMC6P62333 389 aa8.48□□□□□ -1.05
HMGXB3-204ENST00000513318 CTTNQ14247 550 aaKnown RBP8.48□□□□□ -1.05
HMGXB3-204ENST00000513318 SNX17Q15036 470 aa8.48□□□□□ -1.05
HMGXB3-204ENST00000513318 PLCB4Q15147 1175 aa8.48□□□□□ -1.05
HMGXB3-204ENST00000513318 NBPF20Q3BBV1 942 aa8.48□□□□□ -1.05
HMGXB3-204ENST00000513318 XKR3Q5GH77 459 aa8.48□□□□□ -1.05
HMGXB3-204ENST00000513318 AXDND1Q5T1B0 1012 aaPredicted RBP8.48□□□□□ -1.05
HMGXB3-204ENST00000513318 C1orf53Q5VUE5 145 aa8.48□□□□□ -1.05
HMGXB3-204ENST00000513318 ADALQ6DHV7 355 aa8.48□□□□□ -1.05
HMGXB3-204ENST00000513318 CLEC17AQ6ZS10 378 aa8.48□□□□□ -1.05
HMGXB3-204ENST00000513318 UBE2Q1Q7Z7E8 422 aa8.48□□□□□ -1.05
HMGXB3-204ENST00000513318 CABP7Q86V35 215 aa8.48□□□□□ -1.05
HMGXB3-204ENST00000513318 TPH2Q8IWU9 490 aa8.48□□□□□ -1.05
HMGXB3-204ENST00000513318 C7orf31Q8N865 590 aa8.48□□□□□ -1.05
HMGXB3-204ENST00000513318 TMEM87AQ8NBN3 555 aa8.48□□□□□ -1.05
HMGXB3-204ENST00000513318 SYMPKQ92797 1274 aaKnown RBP8.48□□□□□ -1.05
HMGXB3-204ENST00000513318 VTI1AQ96AJ9 217 aa8.48□□□□□ -1.05
HMGXB3-204ENST00000513318 CALML4Q96GE6 196 aa8.48□□□□□ -1.05
HMGXB3-204ENST00000513318 CDK5RAP3Q96JB5 506 aa8.48□□□□□ -1.05
HMGXB3-204ENST00000513318 CCDC43Q96MW1 224 aaKnown RBP8.48□□□□□ -1.05
HMGXB3-204ENST00000513318 GBP4Q96PP9 640 aa8.48□□□□□ -1.05
HMGXB3-204ENST00000513318 MMTAG2Q9BU76 263 aaKnown RBP8.48□□□□□ -1.05
HMGXB3-204ENST00000513318 RNPEPQ9H4A4 650 aa8.48□□□□□ -1.05
HMGXB3-204ENST00000513318 GDPD2Q9HCC8 539 aa8.48□□□□□ -1.05
HMGXB3-204ENST00000513318 WRAP73Q9P2S5 460 aaPredicted RBP8.48□□□□□ -1.05
HMGXB3-204ENST00000513318 CCDC39Q9UFE4 941 aa8.48□□□□□ -1.05
HMGXB3-204ENST00000513318 SEPT9Q9UHD8 586 aaPredicted RBP8.48□□□□□ -1.05
HMGXB3-204ENST00000513318 PPME1Q9Y570 386 aa8.48□□□□□ -1.05
HMGXB3-204ENST00000513318 GRIN2DO15399 1336 aa8.48□□□□□ -1.05
HMGXB3-204ENST00000513318 NRCAMQ92823 1304 aa8.48□□□□□ -1.05
HMGXB3-204ENST00000513318 RRN3P2A6NIE6 340 aa8.47□□□□□ -1.05
HMGXB3-204ENST00000513318 ARVCFO00192 962 aa8.47□□□□□ -1.05
HMGXB3-204ENST00000513318 SMIM10L2AP0DMW4 78 aa8.47□□□□□ -1.05
HMGXB3-204ENST00000513318 SMIM10L2BP0DMW5 78 aa8.47□□□□□ -1.05
HMGXB3-204ENST00000513318 GNAT1P11488 350 aa8.47□□□□□ -1.05
HMGXB3-204ENST00000513318 XRCC6P12956 609 aaKnown RBP eCLIP8.47□□□□□ -1.05
HMGXB3-204ENST00000513318 CDC25AP30304 524 aa8.47□□□□□ -1.05
HMGXB3-204ENST00000513318 HOXC8P31273 242 aa8.47□□□□□ -1.05
HMGXB3-204ENST00000513318 YWHABP31946 246 aaKnown RBP8.47□□□□□ -1.05
HMGXB3-204ENST00000513318 CHMP4BP1P59074 171 aa8.47□□□□□ -1.05
HMGXB3-204ENST00000513318 PPFIA1Q13136 1202 aa8.47□□□□□ -1.05
HMGXB3-204ENST00000513318 TMEM119Q4V9L6 283 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms