RNA–Protein interactions for RNA: ENST00000512881.5

RFC1-215, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-215ENST00000512881 HMX2A2RU54 273 aa8.14□□□□□ -1.11
RFC1-215ENST00000512881 MEGF11A6BM72 1044 aa8.14□□□□□ -1.11
RFC1-215ENST00000512881 DNM1LO00429 736 aa8.14□□□□□ -1.11
RFC1-215ENST00000512881 GPR182O15218 404 aa8.14□□□□□ -1.11
RFC1-215ENST00000512881 FOXP2O15409 715 aa8.14□□□□□ -1.11
RFC1-215ENST00000512881 SEPT4O43236 478 aa8.14□□□□□ -1.11
RFC1-215ENST00000512881 NDUFB5O43674 189 aa8.14□□□□□ -1.11
RFC1-215ENST00000512881 ZBED4O75132 1171 aa8.14□□□□□ -1.11
RFC1-215ENST00000512881 DLGAP3O95886 979 aa8.14□□□□□ -1.11
RFC1-215ENST00000512881 TTLL1O95922 423 aa8.14□□□□□ -1.11
RFC1-215ENST00000512881 TSPY3P0CV98 308 aa8.14□□□□□ -1.11
RFC1-215ENST00000512881 TSPY8P0CW00 308 aa8.14□□□□□ -1.11
RFC1-215ENST00000512881 MAGEA10P43363 369 aaPredicted RBP8.14□□□□□ -1.11
RFC1-215ENST00000512881 GRIA4P48058 902 aa8.14□□□□□ -1.11
RFC1-215ENST00000512881 CD97P48960 835 aa8.14□□□□□ -1.11
RFC1-215ENST00000512881 PDE1AP54750 535 aa8.14□□□□□ -1.11
RFC1-215ENST00000512881 PPARAQ07869 468 aa8.14□□□□□ -1.11
RFC1-215ENST00000512881 ORC1Q13415 861 aa8.14□□□□□ -1.11
RFC1-215ENST00000512881 ZNF792Q3KQV3 632 aa8.14□□□□□ -1.11
RFC1-215ENST00000512881 GJC2Q5T442 439 aaPredicted RBP8.14□□□□□ -1.11
RFC1-215ENST00000512881 ANO1Q5XXA6 986 aa8.14□□□□□ -1.11
RFC1-215ENST00000512881 FDX2Q6P4F2 183 aa8.14□□□□□ -1.11
RFC1-215ENST00000512881 CCDC129Q6ZRS4 1044 aa8.14□□□□□ -1.11
RFC1-215ENST00000512881 ZDHHC13Q8IUH4 622 aa8.14□□□□□ -1.11
RFC1-215ENST00000512881 EVI5LQ96CN4 794 aa8.14□□□□□ -1.11
RFC1-215ENST00000512881 TINF2Q9BSI4 451 aa8.14□□□□□ -1.11
RFC1-215ENST00000512881 TEX13BQ9BXU2 312 aa8.14□□□□□ -1.11
RFC1-215ENST00000512881 TMPRSS13Q9BYE2 586 aa8.14□□□□□ -1.11
RFC1-215ENST00000512881 INCENPQ9NQS7 918 aa8.14□□□□□ -1.11
RFC1-215ENST00000512881 FEM1BQ9UK73 627 aa8.14□□□□□ -1.11
RFC1-215ENST00000512881 SYNPO2Q9UMS6 1093 aa8.14□□□□□ -1.11
RFC1-215ENST00000512881 DIS3Q9Y2L1 958 aaKnown RBP8.14□□□□□ -1.11
RFC1-215ENST00000512881 RIPK3Q9Y572 518 aa8.14□□□□□ -1.11
RFC1-215ENST00000512881 DDX60LQ5H9U9 1706 aaKnown RBP8.14□□□□□ -1.11
RFC1-215ENST00000512881 LAMA2P24043 3122 aaKnown RBP8.14□□□□□ -1.11
RFC1-215ENST00000512881 PLXNB2O15031 1838 aa8.13□□□□□ -1.11
RFC1-215ENST00000512881 ATP2A1O14983 1001 aa8.13□□□□□ -1.11
RFC1-215ENST00000512881 TIAF1O95411 115 aa8.13□□□□□ -1.11
RFC1-215ENST00000512881 TGFB1P01137 390 aa8.13□□□□□ -1.11
RFC1-215ENST00000512881 BMP3P12645 472 aa8.13□□□□□ -1.11
RFC1-215ENST00000512881 TAL1P17542 331 aaPredicted RBP8.13□□□□□ -1.11
RFC1-215ENST00000512881 ALX1Q15699 326 aa8.13□□□□□ -1.11
RFC1-215ENST00000512881 VPS53Q5VIR6 699 aa8.13□□□□□ -1.11
RFC1-215ENST00000512881 SLFN13Q68D06 897 aa8.13□□□□□ -1.11
RFC1-215ENST00000512881 SNRNP48Q6IEG0 339 aaKnown RBP8.13□□□□□ -1.11
RFC1-215ENST00000512881 CPXCR1Q8N123 301 aa8.13□□□□□ -1.11
RFC1-215ENST00000512881 LRRC47Q8N1G4 583 aaKnown RBP8.13□□□□□ -1.11
RFC1-215ENST00000512881 GMCL1P1Q8NEA9 526 aa8.13□□□□□ -1.11
RFC1-215ENST00000512881 RWDD1Q9H446 243 aaPredicted RBP8.13□□□□□ -1.11
RFC1-215ENST00000512881 LIN7BQ9HAP6 207 aa8.13□□□□□ -1.11
RFC1-215ENST00000512881 SLC38A10Q9HBR0 1119 aa8.13□□□□□ -1.11
RFC1-215ENST00000512881 HELLSQ9NRZ9 838 aa8.13□□□□□ -1.11
RFC1-215ENST00000512881 NRBP1Q9UHY1 535 aa8.13□□□□□ -1.11
RFC1-215ENST00000512881 HIF3AQ9Y2N7 669 aa8.13□□□□□ -1.11
RFC1-215ENST00000512881 CTDP1Q9Y5B0 961 aaPredicted RBP8.13□□□□□ -1.11
RFC1-215ENST00000512881 TMEM232C9JQI7 657 aa8.12□□□□□ -1.11
RFC1-215ENST00000512881 KBTBD13C9JR72 458 aa8.12□□□□□ -1.11
RFC1-215ENST00000512881 SART1O43290 800 aaKnown RBP8.12□□□□□ -1.11
RFC1-215ENST00000512881 MCCP23508 829 aa8.12□□□□□ -1.11
RFC1-215ENST00000512881 ADCYAP1R1P41586 468 aa8.12□□□□□ -1.11
RFC1-215ENST00000512881 LRRC41Q15345 812 aa8.12□□□□□ -1.11
RFC1-215ENST00000512881 MCMDC2Q4G0Z9 681 aa8.12□□□□□ -1.11
RFC1-215ENST00000512881 RNF43Q68DV7 783 aa8.12□□□□□ -1.11
RFC1-215ENST00000512881 SLC39A5Q6ZMH5 540 aa8.12□□□□□ -1.11
RFC1-215ENST00000512881 TICAM2Q86XR7 235 aa8.12□□□□□ -1.11
RFC1-215ENST00000512881 CHMP4CQ96CF2 233 aa8.12□□□□□ -1.11
RFC1-215ENST00000512881 DDX11Q96FC9 970 aa8.12□□□□□ -1.11
RFC1-215ENST00000512881 FAM227BQ96M60 508 aa8.12□□□□□ -1.11
RFC1-215ENST00000512881 LNPKQ9C0E8 428 aa8.12□□□□□ -1.11
RFC1-215ENST00000512881 SUGCTQ9HAC7 445 aa8.12□□□□□ -1.11
RFC1-215ENST00000512881 RAVER2Q9HCJ3 691 aaKnown RBP8.12□□□□□ -1.11
RFC1-215ENST00000512881 NPHS2Q9NP85 383 aa8.12□□□□□ -1.11
RFC1-215ENST00000512881 ANAPC4Q9UJX5 808 aa8.12□□□□□ -1.11
RFC1-215ENST00000512881 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.12□□□□□ -1.11
RFC1-215ENST00000512881 TACC3Q9Y6A5 838 aa8.12□□□□□ -1.11
RFC1-215ENST00000512881 NAV1Q8NEY1 1877 aa8.12□□□□□ -1.11
RFC1-215ENST00000512881 DNAJC25-GNG10A0A024R161 153 aa8.11□□□□□ -1.11
RFC1-215ENST00000512881 A0A096LPE4 126 aa8.11□□□□□ -1.11
RFC1-215ENST00000512881 A0A1W2PPZ6 126 aa8.11□□□□□ -1.11
RFC1-215ENST00000512881 TSPY2A6NKD2 308 aa8.11□□□□□ -1.11
RFC1-215ENST00000512881 RANBP6O60518 1105 aaKnown RBP8.11□□□□□ -1.11
RFC1-215ENST00000512881 NMT2O60551 498 aa8.11□□□□□ -1.11
RFC1-215ENST00000512881 SNAI1O95863 264 aaPredicted RBP8.11□□□□□ -1.11
RFC1-215ENST00000512881 IGHDP01880 384 aa8.11□□□□□ -1.11
RFC1-215ENST00000512881 FGAP02671 866 aa8.11□□□□□ -1.11
RFC1-215ENST00000512881 ZNF865P0CJ78 1059 aaPredicted RBP8.11□□□□□ -1.11
RFC1-215ENST00000512881 RARBP10826 455 aa8.11□□□□□ -1.11
RFC1-215ENST00000512881 SSTR4P31391 388 aa8.11□□□□□ -1.11
RFC1-215ENST00000512881 SLC1A4P43007 532 aa8.11□□□□□ -1.11
RFC1-215ENST00000512881 OAZ1P54368 228 aa8.11□□□□□ -1.11
RFC1-215ENST00000512881 RTP1P59025 263 aa8.11□□□□□ -1.11
RFC1-215ENST00000512881 PCDH1Q08174 1060 aa8.11□□□□□ -1.11
RFC1-215ENST00000512881 SPRED3Q2MJR0 410 aa8.11□□□□□ -1.11
RFC1-215ENST00000512881 BEND4Q6ZU67 534 aa8.11□□□□□ -1.11
RFC1-215ENST00000512881 SMC5Q8IY18 1101 aa8.11□□□□□ -1.11
RFC1-215ENST00000512881 ANKRD35Q8N283 1001 aa8.11□□□□□ -1.11
RFC1-215ENST00000512881 MSL3Q8N5Y2 521 aaKnown RBP8.11□□□□□ -1.11
RFC1-215ENST00000512881 SMG8Q8ND04 991 aaKnown RBP8.11□□□□□ -1.11
RFC1-215ENST00000512881 CHST13Q8NET6 341 aa8.11□□□□□ -1.11
RFC1-215ENST00000512881 CHURC1Q8WUH1 139 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms