RNA–Protein interactions for RNA: ENST00000510099.5

PDLIM5-214, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-214ENST00000510099 AMPD2Q01433 879 aa5.25□□□□□ -1.57
PDLIM5-214ENST00000510099 KCNC4Q03721 635 aa5.25□□□□□ -1.57
PDLIM5-214ENST00000510099 MAPK7Q13164 816 aa5.25□□□□□ -1.57
PDLIM5-214ENST00000510099 ITGB3BPQ13352 177 aaPredicted RBP5.25□□□□□ -1.57
PDLIM5-214ENST00000510099 DGKZQ13574 1117 aa5.25□□□□□ -1.57
PDLIM5-214ENST00000510099 TUBB2AQ13885 445 aa5.25□□□□□ -1.57
PDLIM5-214ENST00000510099 TKFCQ3LXA3 575 aa5.25□□□□□ -1.57
PDLIM5-214ENST00000510099 MUM1L1Q5H9M0 696 aa5.25□□□□□ -1.57
PDLIM5-214ENST00000510099 NBPF12Q5TAG4 269 aaPredicted RBP5.25□□□□□ -1.57
PDLIM5-214ENST00000510099 ANGEL2Q5VTE6 544 aaKnown RBP5.25□□□□□ -1.57
PDLIM5-214ENST00000510099 XRRA1Q6P2D8 792 aa5.25□□□□□ -1.57
PDLIM5-214ENST00000510099 FBXO38Q6PIJ6 1188 aa5.25□□□□□ -1.57
PDLIM5-214ENST00000510099 FRMD5Q7Z6J6 570 aa5.25□□□□□ -1.57
PDLIM5-214ENST00000510099 TPH2Q8IWU9 490 aa5.25□□□□□ -1.57
PDLIM5-214ENST00000510099 SLC35F6Q8N357 371 aa5.25□□□□□ -1.57
PDLIM5-214ENST00000510099 ZNF280CQ8ND82 737 aa5.25□□□□□ -1.57
PDLIM5-214ENST00000510099 EHBP1Q8NDI1 1231 aa5.25□□□□□ -1.57
PDLIM5-214ENST00000510099 MNS1Q8NEH6 495 aa5.25□□□□□ -1.57
PDLIM5-214ENST00000510099 NLGN2Q8NFZ4 835 aa5.25□□□□□ -1.57
PDLIM5-214ENST00000510099 NEK11Q8NG66 645 aa5.25□□□□□ -1.57
PDLIM5-214ENST00000510099 PIGOQ8TEQ8 1089 aa5.25□□□□□ -1.57
PDLIM5-214ENST00000510099 SMCR8Q8TEV9 937 aaPredicted RBP5.25□□□□□ -1.57
PDLIM5-214ENST00000510099 SYN2Q92777 582 aaPredicted RBP5.25□□□□□ -1.57
PDLIM5-214ENST00000510099 ATG4CQ96DT6 458 aa5.25□□□□□ -1.57
PDLIM5-214ENST00000510099 PCMTD1Q96MG8 357 aaPredicted RBP5.25□□□□□ -1.57
PDLIM5-214ENST00000510099 NACC1Q96RE7 527 aa5.25□□□□□ -1.57
PDLIM5-214ENST00000510099 WRNIP1Q96S55 665 aa5.25□□□□□ -1.57
PDLIM5-214ENST00000510099 NAPGQ99747 312 aaPredicted RBP5.25□□□□□ -1.57
PDLIM5-214ENST00000510099 TUBB2BQ9BVA1 445 aa5.25□□□□□ -1.57
PDLIM5-214ENST00000510099 LSM14BQ9BX40 385 aaKnown RBP5.25□□□□□ -1.57
PDLIM5-214ENST00000510099 CARD6Q9BX69 1037 aa5.25□□□□□ -1.57
PDLIM5-214ENST00000510099 MAF1Q9H063 256 aa5.25□□□□□ -1.57
PDLIM5-214ENST00000510099 GANQ9H2C0 597 aa5.25□□□□□ -1.57
PDLIM5-214ENST00000510099 ZHX3Q9H4I2 956 aa5.25□□□□□ -1.57
PDLIM5-214ENST00000510099 NHEJ1Q9H9Q4 299 aaPredicted RBP5.25□□□□□ -1.57
PDLIM5-214ENST00000510099 PARVGQ9HBI0 331 aa5.25□□□□□ -1.57
PDLIM5-214ENST00000510099 AS3MTQ9HBK9 375 aa5.25□□□□□ -1.57
PDLIM5-214ENST00000510099 RAVER2Q9HCJ3 691 aaKnown RBP5.25□□□□□ -1.57
PDLIM5-214ENST00000510099 AGO4Q9HCK5 861 aaKnown RBP5.25□□□□□ -1.57
PDLIM5-214ENST00000510099 JADE2Q9NQC1 790 aa5.25□□□□□ -1.57
PDLIM5-214ENST00000510099 KCNH7Q9NS40 1196 aa5.25□□□□□ -1.57
PDLIM5-214ENST00000510099 FAM207AQ9NSI2 230 aaPredicted RBP5.25□□□□□ -1.57
PDLIM5-214ENST00000510099 GGA3Q9NZ52 723 aa5.25□□□□□ -1.57
PDLIM5-214ENST00000510099 GPRC5DQ9NZD1 345 aa5.25□□□□□ -1.57
PDLIM5-214ENST00000510099 CEP72Q9P209 647 aa5.25□□□□□ -1.57
PDLIM5-214ENST00000510099 PPP1R1BQ9UD71 204 aaPredicted RBP5.25□□□□□ -1.57
PDLIM5-214ENST00000510099 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.25□□□□□ -1.57
PDLIM5-214ENST00000510099 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.25□□□□□ -1.57
PDLIM5-214ENST00000510099 GJA3Q9Y6H8 435 aa5.25□□□□□ -1.57
PDLIM5-214ENST00000510099 V9GYY5 206 aaPredicted RBP5.25□□□□□ -1.57
PDLIM5-214ENST00000510099 MYPNQ86TC9 1320 aa5.24□□□□□ -1.57
PDLIM5-214ENST00000510099 PAPPA2Q9BXP8 1791 aa5.24□□□□□ -1.57
PDLIM5-214ENST00000510099 SSU72P8A0A1W2PR75 194 aa5.24□□□□□ -1.57
PDLIM5-214ENST00000510099 CTAGE9A4FU28 777 aa5.24□□□□□ -1.57
PDLIM5-214ENST00000510099 ARHGEF35A5YM69 484 aa5.24□□□□□ -1.57
PDLIM5-214ENST00000510099 RBAK-RBAKDNI3L0D1 243 aa5.24□□□□□ -1.57
PDLIM5-214ENST00000510099 ZNF263O14978 683 aa5.24□□□□□ -1.57
PDLIM5-214ENST00000510099 ATP2A1O14983 1001 aa5.24□□□□□ -1.57
PDLIM5-214ENST00000510099 TGFB1I1O43294 461 aa5.24□□□□□ -1.57
PDLIM5-214ENST00000510099 HIP1RO75146 1068 aa5.24□□□□□ -1.57
PDLIM5-214ENST00000510099 AKAP3O75969 853 aa5.24□□□□□ -1.57
PDLIM5-214ENST00000510099 NOL4O94818 638 aa5.24□□□□□ -1.57
PDLIM5-214ENST00000510099 PRPF6O94906 941 aaKnown RBP5.24□□□□□ -1.57
PDLIM5-214ENST00000510099 IPO7O95373 1038 aaKnown RBP5.24□□□□□ -1.57
PDLIM5-214ENST00000510099 GCNT3O95395 438 aa5.24□□□□□ -1.57
PDLIM5-214ENST00000510099 EPB41P11171 864 aaKnown RBP5.24□□□□□ -1.57
PDLIM5-214ENST00000510099 EIF2AK2P19525 551 aaKnown RBP5.24□□□□□ -1.57
PDLIM5-214ENST00000510099 JAK3P52333 1124 aa5.24□□□□□ -1.57
PDLIM5-214ENST00000510099 KIF11P52732 1056 aa5.24□□□□□ -1.57
PDLIM5-214ENST00000510099 RPS6P62753 249 aaKnown RBP5.24□□□□□ -1.57
PDLIM5-214ENST00000510099 MRPS9P82933 396 aaKnown RBP5.24□□□□□ -1.57
PDLIM5-214ENST00000510099 KCNMA1Q12791 1236 aa5.24□□□□□ -1.57
PDLIM5-214ENST00000510099 SPP2Q13103 211 aa5.24□□□□□ -1.57
PDLIM5-214ENST00000510099 ADAM9Q13443 819 aa5.24□□□□□ -1.57
PDLIM5-214ENST00000510099 MTMR1Q13613 665 aa5.24□□□□□ -1.57
PDLIM5-214ENST00000510099 PGM5Q15124 567 aa5.24□□□□□ -1.57
PDLIM5-214ENST00000510099 WHAMMP3Q1A5X7 153 aa5.24□□□□□ -1.57
PDLIM5-214ENST00000510099 ERCC6LQ2NKX8 1250 aa5.24□□□□□ -1.57
PDLIM5-214ENST00000510099 ASTE1Q2TB18 679 aaPredicted RBP5.24□□□□□ -1.57
PDLIM5-214ENST00000510099 ZNF569Q5MCW4 686 aa5.24□□□□□ -1.57
PDLIM5-214ENST00000510099 HGSNATQ68CP4 663 aa5.24□□□□□ -1.57
PDLIM5-214ENST00000510099 DPY19L2P1Q6NXN4 242 aa5.24□□□□□ -1.57
PDLIM5-214ENST00000510099 RSRC2Q7L4I2 434 aaKnown RBP5.24□□□□□ -1.57
PDLIM5-214ENST00000510099 TRAPPC11Q7Z392 1133 aa5.24□□□□□ -1.57
PDLIM5-214ENST00000510099 MIER3Q7Z3K6 550 aa5.24□□□□□ -1.57
PDLIM5-214ENST00000510099 DAW1Q8N136 415 aa5.24□□□□□ -1.57
PDLIM5-214ENST00000510099 GPC2Q8N158 579 aa5.24□□□□□ -1.57
PDLIM5-214ENST00000510099 CCDC155Q8N6L0 562 aa5.24□□□□□ -1.57
PDLIM5-214ENST00000510099 BANK1Q8NDB2 785 aa5.24□□□□□ -1.57
PDLIM5-214ENST00000510099 JAKMIP2Q96AA8 810 aa5.24□□□□□ -1.57
PDLIM5-214ENST00000510099 GPRASP2Q96D09 838 aa5.24□□□□□ -1.57
PDLIM5-214ENST00000510099 KLRG1Q96E93 195 aa5.24□□□□□ -1.57
PDLIM5-214ENST00000510099 WNK4Q96J92 1243 aa5.24□□□□□ -1.57
PDLIM5-214ENST00000510099 TRERF1Q96PN7 1200 aa5.24□□□□□ -1.57
PDLIM5-214ENST00000510099 PDCD2LQ9BRP1 358 aa5.24□□□□□ -1.57
PDLIM5-214ENST00000510099 MKNK1Q9BUB5 465 aa5.24□□□□□ -1.57
PDLIM5-214ENST00000510099 CCDC94Q9BW85 323 aaPredicted RBP5.24□□□□□ -1.57
PDLIM5-214ENST00000510099 STRA6Q9BX79 667 aa5.24□□□□□ -1.57
PDLIM5-214ENST00000510099 TSGA10Q9BZW7 698 aa5.24□□□□□ -1.57
PDLIM5-214ENST00000510099 NUCKS1Q9H1E3 243 aaKnown RBP5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms