RNA–Protein interactions for RNA: ENST00000509388.5

RNF4-213, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-213ENST00000509388 MRPS27Q92552 414 aaKnown RBP16.55■□□□□ 0.24
RNF4-213ENST00000509388 PNMA5Q96PV4 448 aa16.55■□□□□ 0.24
RNF4-213ENST00000509388 SH2D3AQ9BRG2 576 aa16.55■□□□□ 0.24
RNF4-213ENST00000509388 HTATIP2Q9BUP3 242 aa16.55■□□□□ 0.24
RNF4-213ENST00000509388 CYP26B1Q9NR63 512 aa16.55■□□□□ 0.24
RNF4-213ENST00000509388 DBR1Q9UK59 544 aaKnown RBP16.55■□□□□ 0.24
RNF4-213ENST00000509388 PPME1Q9Y570 386 aa16.55■□□□□ 0.24
RNF4-213ENST00000509388 TMEM150BA6NC51 233 aa16.54■□□□□ 0.24
RNF4-213ENST00000509388 ZBTB39O15060 712 aa16.54■□□□□ 0.24
RNF4-213ENST00000509388 MAGEB2O15479 319 aa16.54■□□□□ 0.24
RNF4-213ENST00000509388 PRPF40AO75400 957 aaKnown RBP16.54■□□□□ 0.24
RNF4-213ENST00000509388 STBD1O95210 358 aa16.54■□□□□ 0.24
RNF4-213ENST00000509388 EYA4O95677 639 aa16.54■□□□□ 0.24
RNF4-213ENST00000509388 PLCG1P19174 1290 aa16.54■□□□□ 0.24
RNF4-213ENST00000509388 KLRC1P26715 233 aa16.54■□□□□ 0.24
RNF4-213ENST00000509388 CDK7P50613 346 aa16.54■□□□□ 0.24
RNF4-213ENST00000509388 NPEPPSP55786 919 aa16.54■□□□□ 0.24
RNF4-213ENST00000509388 RTP1P59025 263 aa16.54■□□□□ 0.24
RNF4-213ENST00000509388 TRIM60Q495X7 471 aa16.54■□□□□ 0.24
RNF4-213ENST00000509388 GDF6Q6KF10 455 aaPredicted RBP16.54■□□□□ 0.24
RNF4-213ENST00000509388 CLEC17AQ6ZS10 378 aa16.54■□□□□ 0.24
RNF4-213ENST00000509388 FSIP1Q8NA03 581 aa16.54■□□□□ 0.24
RNF4-213ENST00000509388 IQUBQ8NA54 791 aa16.54■□□□□ 0.24
RNF4-213ENST00000509388 RETREG2Q8NC44 543 aa16.54■□□□□ 0.24
RNF4-213ENST00000509388 LMBR1Q8WVP7 490 aa16.54■□□□□ 0.24
RNF4-213ENST00000509388 TRAPPC12Q8WVT3 735 aa16.54■□□□□ 0.24
RNF4-213ENST00000509388 SLC7A3Q8WY07 619 aa16.54■□□□□ 0.24
RNF4-213ENST00000509388 JPH2Q9BR39 696 aaPredicted RBP16.54■□□□□ 0.24
RNF4-213ENST00000509388 BHMT2Q9H2M3 363 aa16.54■□□□□ 0.24
RNF4-213ENST00000509388 TUBE1Q9UJT0 475 aa16.54■□□□□ 0.24
RNF4-213ENST00000509388 KCNH3Q9ULD8 1083 aa16.54■□□□□ 0.24
RNF4-213ENST00000509388 KIAA0100Q14667 2235 aaKnown RBP16.54■□□□□ 0.24
RNF4-213ENST00000509388 A0A1B0GVL5 298 aa16.53■□□□□ 0.24
RNF4-213ENST00000509388 CYP2C9P11712 490 aa16.53■□□□□ 0.24
RNF4-213ENST00000509388 TMOD1P28289 359 aa16.53■□□□□ 0.24
RNF4-213ENST00000509388 RFC5P40937 340 aa16.53■□□□□ 0.24
RNF4-213ENST00000509388 RARRES1P49788 294 aa16.53■□□□□ 0.24
RNF4-213ENST00000509388 POLGP54098 1239 aaPredicted RBP16.53■□□□□ 0.24
RNF4-213ENST00000509388 ZNF200P98182 395 aaPredicted RBP16.53■□□□□ 0.24
RNF4-213ENST00000509388 TLE2Q04725 743 aa16.53■□□□□ 0.24
RNF4-213ENST00000509388 SNX17Q15036 470 aa16.53■□□□□ 0.24
RNF4-213ENST00000509388 LRRC26Q2I0M4 334 aa16.53■□□□□ 0.24
RNF4-213ENST00000509388 TMEM119Q4V9L6 283 aa16.53■□□□□ 0.24
RNF4-213ENST00000509388 MTHFD1LQ6UB35 978 aa16.53■□□□□ 0.24
RNF4-213ENST00000509388 UBE2Q1Q7Z7E8 422 aa16.53■□□□□ 0.24
RNF4-213ENST00000509388 METTL13Q8N6R0 699 aa16.53■□□□□ 0.24
RNF4-213ENST00000509388 TMEM87AQ8NBN3 555 aa16.53■□□□□ 0.24
RNF4-213ENST00000509388 TOX2Q96NM4 488 aa16.53■□□□□ 0.24
RNF4-213ENST00000509388 TRPV6Q9H1D0 765 aa16.53■□□□□ 0.24
RNF4-213ENST00000509388 SUGCTQ9HAC7 445 aa16.53■□□□□ 0.24
RNF4-213ENST00000509388 TRMT13Q9NUP7 481 aaKnown RBP16.53■□□□□ 0.24
RNF4-213ENST00000509388 STK17AQ9UEE5 414 aa16.53■□□□□ 0.24
RNF4-213ENST00000509388 FRMPD3Q5JV73 1810 aa16.53■□□□□ 0.24
RNF4-213ENST00000509388 MYH15Q9Y2K3 1946 aa16.53■□□□□ 0.24
RNF4-213ENST00000509388 POLR2DO15514 142 aaKnown RBP16.52■□□□□ 0.24
RNF4-213ENST00000509388 TREHO43280 583 aa16.52■□□□□ 0.24
RNF4-213ENST00000509388 B4GALT4O60513 344 aa16.52■□□□□ 0.24
RNF4-213ENST00000509388 DGAT1O75907 488 aa16.52■□□□□ 0.24
RNF4-213ENST00000509388 PLA2G4BP0C869 781 aa16.52■□□□□ 0.24
RNF4-213ENST00000509388 PFKFB1P16118 471 aa16.52■□□□□ 0.24
RNF4-213ENST00000509388 SYKP43405 635 aa16.52■□□□□ 0.24
RNF4-213ENST00000509388 DNM2P50570 870 aa16.52■□□□□ 0.24
RNF4-213ENST00000509388 DHX8Q14562 1220 aaKnown RBP16.52■□□□□ 0.24
RNF4-213ENST00000509388 TARBP2Q15633 366 aaKnown RBP16.52■□□□□ 0.24
RNF4-213ENST00000509388 TAF2Q6P1X5 1199 aa16.52■□□□□ 0.24
RNF4-213ENST00000509388 PADI6Q6TGC4 694 aa16.52■□□□□ 0.24
RNF4-213ENST00000509388 ANKRD33Q7Z3H0 272 aa16.52■□□□□ 0.24
RNF4-213ENST00000509388 RSPH3Q86UC2 560 aa16.52■□□□□ 0.24
RNF4-213ENST00000509388 FAM126BQ8IXS8 530 aa16.52■□□□□ 0.24
RNF4-213ENST00000509388 DHX58Q96C10 678 aa16.52■□□□□ 0.24
RNF4-213ENST00000509388 CENPFP49454 3210 aa16.51■□□□□ 0.23
RNF4-213ENST00000509388 CAPN15O75808 1086 aa16.51■□□□□ 0.23
RNF4-213ENST00000509388 KRT18P05783 430 aaKnown RBP16.51■□□□□ 0.23
RNF4-213ENST00000509388 UBE2HP62256 183 aa16.51■□□□□ 0.23
RNF4-213ENST00000509388 PTK7Q13308 1070 aa16.51■□□□□ 0.23
RNF4-213ENST00000509388 EFCAB12Q6NXP0 572 aa16.51■□□□□ 0.23
RNF4-213ENST00000509388 SV2BQ7L1I2 683 aa16.51■□□□□ 0.23
RNF4-213ENST00000509388 KCNK18Q7Z418 384 aa16.51■□□□□ 0.23
RNF4-213ENST00000509388 CEP57L1Q8IYX8 460 aa16.51■□□□□ 0.23
RNF4-213ENST00000509388 CCDC155Q8N6L0 562 aa16.51■□□□□ 0.23
RNF4-213ENST00000509388 LARP4BQ92615 738 aaKnown RBP16.51■□□□□ 0.23
RNF4-213ENST00000509388 RAD54LQ92698 747 aa16.51■□□□□ 0.23
RNF4-213ENST00000509388 DPF3Q92784 378 aa16.51■□□□□ 0.23
RNF4-213ENST00000509388 CCDC34Q96HJ3 373 aa16.51■□□□□ 0.23
RNF4-213ENST00000509388 MTRQ99707 1265 aa16.51■□□□□ 0.23
RNF4-213ENST00000509388 FAM49AQ9H0Q0 323 aaPredicted RBP16.51■□□□□ 0.23
RNF4-213ENST00000509388 CUEDC2Q9H467 287 aa16.51■□□□□ 0.23
RNF4-213ENST00000509388 ATP6V0A4Q9HBG4 840 aa16.51■□□□□ 0.23
RNF4-213ENST00000509388 BMP2KQ9NSY1 1161 aaPredicted RBP16.51■□□□□ 0.23
RNF4-213ENST00000509388 PCDHA2Q9Y5H9 948 aa16.51■□□□□ 0.23
RNF4-213ENST00000509388 MBLAC1A4D2B0 266 aaPredicted RBP16.5■□□□□ 0.23
RNF4-213ENST00000509388 ZBTB42B2RXF5 422 aa16.5■□□□□ 0.23
RNF4-213ENST00000509388 USO1O60763 962 aaKnown RBP16.5■□□□□ 0.23
RNF4-213ENST00000509388 MAFO75444 373 aaPredicted RBP16.5■□□□□ 0.23
RNF4-213ENST00000509388 C22orf31O95567 290 aa16.5■□□□□ 0.23
RNF4-213ENST00000509388 RPLP2P05387 115 aaKnown RBP16.5■□□□□ 0.23
RNF4-213ENST00000509388 HOXC8P31273 242 aa16.5■□□□□ 0.23
RNF4-213ENST00000509388 NDUFA8P51970 172 aa16.5■□□□□ 0.23
RNF4-213ENST00000509388 HIC1Q14526 733 aa16.5■□□□□ 0.23
RNF4-213ENST00000509388 MCM6Q14566 821 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms