RNA–Protein interactions for RNA: ENST00000508848.5

POLR2J3-213, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 1,030 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-213ENST00000508848 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.9□□□□□ -0.5
POLR2J3-213ENST00000508848 POLR3CQ9BUI4 534 aaPredicted RBP11.9□□□□□ -0.5
POLR2J3-213ENST00000508848 RAB34Q9BZG1 259 aa11.9□□□□□ -0.5
POLR2J3-213ENST00000508848 ZSCAN16Q9H4T2 348 aaPredicted RBP11.9□□□□□ -0.5
POLR2J3-213ENST00000508848 TUFT1Q9NNX1 390 aa11.9□□□□□ -0.5
POLR2J3-213ENST00000508848 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.9□□□□□ -0.5
POLR2J3-213ENST00000508848 ANKEF1Q9NU02 776 aa11.9□□□□□ -0.5
POLR2J3-213ENST00000508848 TRANK1O15050 2925 aa11.9□□□□□ -0.51
POLR2J3-213ENST00000508848 CHD9Q3L8U1 2897 aa11.89□□□□□ -0.51
POLR2J3-213ENST00000508848 TMEM265A0A087WTH1 108 aa11.89□□□□□ -0.51
POLR2J3-213ENST00000508848 WNT7AO00755 349 aa11.89□□□□□ -0.51
POLR2J3-213ENST00000508848 NBNO60934 754 aa11.89□□□□□ -0.51
POLR2J3-213ENST00000508848 C22orf31O95567 290 aa11.89□□□□□ -0.51
POLR2J3-213ENST00000508848 OR52Z1P0C646 297 aa11.89□□□□□ -0.51
POLR2J3-213ENST00000508848 SYT1P21579 422 aa11.89□□□□□ -0.51
POLR2J3-213ENST00000508848 MARK3P27448 753 aa11.89□□□□□ -0.51
POLR2J3-213ENST00000508848 RPA1P27694 616 aa11.89□□□□□ -0.51
POLR2J3-213ENST00000508848 TMOD1P28289 359 aa11.89□□□□□ -0.51
POLR2J3-213ENST00000508848 MCM7P33993 719 aa11.89□□□□□ -0.51
POLR2J3-213ENST00000508848 THPOP40225 353 aa11.89□□□□□ -0.51
POLR2J3-213ENST00000508848 MGAT3Q09327 533 aa11.89□□□□□ -0.51
POLR2J3-213ENST00000508848 ODR4Q5SWX8 454 aa11.89□□□□□ -0.51
POLR2J3-213ENST00000508848 CNKSR3Q6P9H4 555 aa11.89□□□□□ -0.51
POLR2J3-213ENST00000508848 HSCBQ8IWL3 235 aa11.89□□□□□ -0.51
POLR2J3-213ENST00000508848 CKAP2LQ8IYA6 745 aa11.89□□□□□ -0.51
POLR2J3-213ENST00000508848 KIAA0319LQ8IZA0 1049 aa11.89□□□□□ -0.51
POLR2J3-213ENST00000508848 LINC01465Q8N7H1 131 aa11.89□□□□□ -0.51
POLR2J3-213ENST00000508848 IGSF22Q8N9C0 903 aa11.89□□□□□ -0.51
POLR2J3-213ENST00000508848 WNT8BQ93098 351 aa11.89□□□□□ -0.51
POLR2J3-213ENST00000508848 TMEM60Q9H2L4 133 aa11.89□□□□□ -0.51
POLR2J3-213ENST00000508848 MYO9BQ13459 2157 aa11.89□□□□□ -0.51
POLR2J3-213ENST00000508848 TTC3P53804 2025 aa11.89□□□□□ -0.51
POLR2J3-213ENST00000508848 MICAL3Q7RTP6 2002 aa11.89□□□□□ -0.51
POLR2J3-213ENST00000508848 HAX1O00165 279 aa11.88□□□□□ -0.51
POLR2J3-213ENST00000508848 CHRNA1P02708 482 aa11.88□□□□□ -0.51
POLR2J3-213ENST00000508848 TXKP42681 527 aa11.88□□□□□ -0.51
POLR2J3-213ENST00000508848 FXR1P51114 621 aaKnown RBP eCLIP11.88□□□□□ -0.51
POLR2J3-213ENST00000508848 MRPS6P82932 125 aaKnown RBP11.88□□□□□ -0.51
POLR2J3-213ENST00000508848 PRKCEQ02156 737 aa11.88□□□□□ -0.51
POLR2J3-213ENST00000508848 PTGDRQ13258 359 aa11.88□□□□□ -0.51
POLR2J3-213ENST00000508848 MKRN4PQ13434 485 aaPredicted RBP11.88□□□□□ -0.51
POLR2J3-213ENST00000508848 IKBKEQ14164 716 aa11.88□□□□□ -0.51
POLR2J3-213ENST00000508848 MBTPS1Q14703 1052 aa11.88□□□□□ -0.51
POLR2J3-213ENST00000508848 ZNF174Q15697 407 aa11.88□□□□□ -0.51
POLR2J3-213ENST00000508848 C9orf50Q5SZB4 431 aa11.88□□□□□ -0.51
POLR2J3-213ENST00000508848 ANO5Q75V66 913 aa11.88□□□□□ -0.51
POLR2J3-213ENST00000508848 SCLYQ96I15 445 aa11.88□□□□□ -0.51
POLR2J3-213ENST00000508848 EIF2AK1Q9BQI3 630 aaKnown RBP11.88□□□□□ -0.51
POLR2J3-213ENST00000508848 CELF4Q9BZC1 486 aaKnown RBP11.88□□□□□ -0.51
POLR2J3-213ENST00000508848 ASAP2O43150 1006 aa11.87□□□□□ -0.51
POLR2J3-213ENST00000508848 CHMP2AO43633 222 aa11.87□□□□□ -0.51
POLR2J3-213ENST00000508848 MAFO75444 373 aaPredicted RBP11.87□□□□□ -0.51
POLR2J3-213ENST00000508848 RFC5P40937 340 aa11.87□□□□□ -0.51
POLR2J3-213ENST00000508848 DNM2P50570 870 aa11.87□□□□□ -0.51
POLR2J3-213ENST00000508848 CRYBB1P53674 252 aaPredicted RBP11.87□□□□□ -0.51
POLR2J3-213ENST00000508848 ATP2C1P98194 919 aaPredicted RBP11.87□□□□□ -0.51
POLR2J3-213ENST00000508848 POU5F1BQ06416 359 aa11.87□□□□□ -0.51
POLR2J3-213ENST00000508848 UGCGQ16739 394 aa11.87□□□□□ -0.51
POLR2J3-213ENST00000508848 TMEM266Q2M3C6 531 aa11.87□□□□□ -0.51
POLR2J3-213ENST00000508848 MCTP1Q6DN14 999 aa11.87□□□□□ -0.51
POLR2J3-213ENST00000508848 ERMNQ8TAM6 284 aa11.87□□□□□ -0.51
POLR2J3-213ENST00000508848 PPP1R13LQ8WUF5 828 aa11.87□□□□□ -0.51
POLR2J3-213ENST00000508848 DNAJB3Q8WWF6 145 aa11.87□□□□□ -0.51
POLR2J3-213ENST00000508848 SEPT8Q92599 483 aa11.87□□□□□ -0.51
POLR2J3-213ENST00000508848 GJA10Q969M2 543 aa11.87□□□□□ -0.51
POLR2J3-213ENST00000508848 RNPC3Q96LT9 517 aaKnown RBP11.87□□□□□ -0.51
POLR2J3-213ENST00000508848 NACC1Q96RE7 527 aa11.87□□□□□ -0.51
POLR2J3-213ENST00000508848 SLC9A7Q96T83 725 aa11.87□□□□□ -0.51
POLR2J3-213ENST00000508848 FTHL17Q9BXU8 183 aa11.87□□□□□ -0.51
POLR2J3-213ENST00000508848 DHX33Q9H6R0 707 aaKnown RBP11.87□□□□□ -0.51
POLR2J3-213ENST00000508848 CYP26B1Q9NR63 512 aa11.87□□□□□ -0.51
POLR2J3-213ENST00000508848 DBR1Q9UK59 544 aaKnown RBP11.87□□□□□ -0.51
POLR2J3-213ENST00000508848 PCDHB6Q9Y5E3 794 aa11.87□□□□□ -0.51
POLR2J3-213ENST00000508848 SIP14410 1827 aa11.87□□□□□ -0.51
POLR2J3-213ENST00000508848 SZT2Q5T011 3432 aa11.86□□□□□ -0.51
POLR2J3-213ENST00000508848 DDX11L8A8MPP1 907 aa11.86□□□□□ -0.51
POLR2J3-213ENST00000508848 M0QZ92 97 aa11.86□□□□□ -0.51
POLR2J3-213ENST00000508848 STX6O43752 255 aa11.86□□□□□ -0.51
POLR2J3-213ENST00000508848 SPATA31C1P0DKV0 1188 aa11.86□□□□□ -0.51
POLR2J3-213ENST00000508848 FOSBP53539 338 aa11.86□□□□□ -0.51
POLR2J3-213ENST00000508848 TBC1D8BQ0IIM8 1120 aa11.86□□□□□ -0.51
POLR2J3-213ENST00000508848 FBXO47Q5MNV8 452 aa11.86□□□□□ -0.51
POLR2J3-213ENST00000508848 ATL3Q6DD88 541 aa11.86□□□□□ -0.51
POLR2J3-213ENST00000508848 EFCAB12Q6NXP0 572 aa11.86□□□□□ -0.51
POLR2J3-213ENST00000508848 DTHD1Q6ZMT9 781 aa11.86□□□□□ -0.51
POLR2J3-213ENST00000508848 RUFY4Q6ZNE9 571 aa11.86□□□□□ -0.51
POLR2J3-213ENST00000508848 TSHZ1Q6ZSZ6 1077 aa11.86□□□□□ -0.51
POLR2J3-213ENST00000508848 AK8Q96MA6 479 aa11.86□□□□□ -0.51
POLR2J3-213ENST00000508848 UIMC1Q96RL1 719 aa11.86□□□□□ -0.51
POLR2J3-213ENST00000508848 LXNQ9BS40 222 aa11.86□□□□□ -0.51
POLR2J3-213ENST00000508848 FTOQ9C0B1 505 aaKnown RBP eCLIP11.86□□□□□ -0.51
POLR2J3-213ENST00000508848 TRPV2Q9Y5S1 764 aa11.86□□□□□ -0.51
POLR2J3-213ENST00000508848 SLC4A7Q9Y6M7 1214 aa11.86□□□□□ -0.51
POLR2J3-213ENST00000508848 ARID2Q68CP9 1835 aa11.86□□□□□ -0.51
POLR2J3-213ENST00000508848 GPR32O75388 356 aa11.85□□□□□ -0.51
POLR2J3-213ENST00000508848 ACRP10323 421 aa11.85□□□□□ -0.51
POLR2J3-213ENST00000508848 YWHABP31946 246 aaKnown RBP11.85□□□□□ -0.51
POLR2J3-213ENST00000508848 TECP42680 631 aa11.85□□□□□ -0.51
POLR2J3-213ENST00000508848 IGBP1P78318 339 aa11.85□□□□□ -0.51
POLR2J3-213ENST00000508848 PCBP1Q15365 356 aaKnown RBP eCLIP11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms