RNA–Protein interactions for RNA: ENST00000508635.5

UBE2D3-226, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 587 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-226ENST00000508635 USP33Q8TEY7 942 aa4.62□□□□□ -1.67
UBE2D3-226ENST00000508635 DIO2Q92813 273 aa4.62□□□□□ -1.67
UBE2D3-226ENST00000508635 OSBP2Q969R2 916 aa4.62□□□□□ -1.67
UBE2D3-226ENST00000508635 MKL1Q969V6 931 aa4.62□□□□□ -1.67
UBE2D3-226ENST00000508635 C1orf159Q96HA4 380 aa4.62□□□□□ -1.67
UBE2D3-226ENST00000508635 MMP19Q99542 508 aa4.62□□□□□ -1.67
UBE2D3-226ENST00000508635 CDC6Q99741 560 aa4.62□□□□□ -1.67
UBE2D3-226ENST00000508635 SLC52A2Q9HAB3 445 aa4.62□□□□□ -1.67
UBE2D3-226ENST00000508635 RXFP1Q9HBX9 757 aa4.62□□□□□ -1.67
UBE2D3-226ENST00000508635 DCP1AQ9NPI6 582 aaPredicted RBP4.62□□□□□ -1.67
UBE2D3-226ENST00000508635 PDLIM7Q9NR12 457 aa4.62□□□□□ -1.67
UBE2D3-226ENST00000508635 MARCH2Q9P0N8 246 aa4.62□□□□□ -1.67
UBE2D3-226ENST00000508635 FBLN5Q9UBX5 448 aa4.62□□□□□ -1.67
UBE2D3-226ENST00000508635 UBR3Q6ZT12 1888 aa4.61□□□□□ -1.67
UBE2D3-226ENST00000508635 OR14I1A6ND48 311 aa4.61□□□□□ -1.67
UBE2D3-226ENST00000508635 RPS6KA4O75676 772 aa4.61□□□□□ -1.67
UBE2D3-226ENST00000508635 FUCA1P04066 466 aa4.61□□□□□ -1.67
UBE2D3-226ENST00000508635 PPP2R1AP30153 589 aa4.61□□□□□ -1.67
UBE2D3-226ENST00000508635 MAP4K2Q12851 820 aa4.61□□□□□ -1.67
UBE2D3-226ENST00000508635 RAB3GAP1Q15042 981 aa4.61□□□□□ -1.67
UBE2D3-226ENST00000508635 SLC35F1Q5T1Q4 408 aa4.61□□□□□ -1.67
UBE2D3-226ENST00000508635 TEX2Q8IWB9 1127 aa4.61□□□□□ -1.67
UBE2D3-226ENST00000508635 LZTR1Q8N653 840 aa4.61□□□□□ -1.67
UBE2D3-226ENST00000508635 ZBTB38Q8NAP3 1195 aaPredicted RBP4.61□□□□□ -1.67
UBE2D3-226ENST00000508635 RCBTB1Q8NDN9 531 aa4.61□□□□□ -1.67
UBE2D3-226ENST00000508635 DPF3Q92784 378 aa4.61□□□□□ -1.67
UBE2D3-226ENST00000508635 ZNF669Q96BR6 464 aaPredicted RBP4.61□□□□□ -1.67
UBE2D3-226ENST00000508635 MRFAP1L1Q96HT8 127 aa4.61□□□□□ -1.67
UBE2D3-226ENST00000508635 CHAMP1Q96JM3 812 aa4.61□□□□□ -1.67
UBE2D3-226ENST00000508635 EPB41L4BQ9H329 900 aa4.61□□□□□ -1.67
UBE2D3-226ENST00000508635 PIF1Q9H611 641 aa4.61□□□□□ -1.67
UBE2D3-226ENST00000508635 PCDHA2Q9Y5H9 948 aa4.61□□□□□ -1.67
UBE2D3-226ENST00000508635 MRC1P22897 1456 aa4.61□□□□□ -1.67
UBE2D3-226ENST00000508635 UTRNP46939 3433 aa4.6□□□□□ -1.67
UBE2D3-226ENST00000508635 MPOP05164 745 aa4.6□□□□□ -1.67
UBE2D3-226ENST00000508635 MMP10P09238 476 aa4.6□□□□□ -1.67
UBE2D3-226ENST00000508635 FGFR1P11362 822 aa4.6□□□□□ -1.67
UBE2D3-226ENST00000508635 GYS1P13807 737 aa4.6□□□□□ -1.67
UBE2D3-226ENST00000508635 FPR2P25090 351 aa4.6□□□□□ -1.67
UBE2D3-226ENST00000508635 RFC4P35249 363 aa4.6□□□□□ -1.67
UBE2D3-226ENST00000508635 LTBRP36941 435 aa4.6□□□□□ -1.67
UBE2D3-226ENST00000508635 BCL6P41182 706 aa4.6□□□□□ -1.67
UBE2D3-226ENST00000508635 CRKLP46109 303 aaKnown RBP4.6□□□□□ -1.67
UBE2D3-226ENST00000508635 KCNAB2Q13303 367 aa4.6□□□□□ -1.67
UBE2D3-226ENST00000508635 SLC39A6Q13433 755 aa4.6□□□□□ -1.67
UBE2D3-226ENST00000508635 NFE2L2Q16236 605 aa4.6□□□□□ -1.67
UBE2D3-226ENST00000508635 E4F1Q66K89 784 aaPredicted RBP4.6□□□□□ -1.67
UBE2D3-226ENST00000508635 IQCEQ6IPM2 695 aa4.6□□□□□ -1.67
UBE2D3-226ENST00000508635 KCNT2Q6UVM3 1135 aa4.6□□□□□ -1.67
UBE2D3-226ENST00000508635 IRF2BP1Q8IU81 584 aa4.6□□□□□ -1.67
UBE2D3-226ENST00000508635 DNAJC10Q8IXB1 793 aa4.6□□□□□ -1.67
UBE2D3-226ENST00000508635 NLGN1Q8N2Q7 840 aa4.6□□□□□ -1.67
UBE2D3-226ENST00000508635 LILRB2Q8N423 598 aa4.6□□□□□ -1.67
UBE2D3-226ENST00000508635 IL17REQ8NFR9 667 aa4.6□□□□□ -1.67
UBE2D3-226ENST00000508635 EXOC2Q96KP1 924 aa4.6□□□□□ -1.67
UBE2D3-226ENST00000508635 PHACTR3Q96KR7 559 aa4.6□□□□□ -1.67
UBE2D3-226ENST00000508635 CFAP53Q96M91 514 aa4.6□□□□□ -1.67
UBE2D3-226ENST00000508635 IPO9Q96P70 1041 aaKnown RBP4.6□□□□□ -1.67
UBE2D3-226ENST00000508635 TNFRSF12AQ9NP84 129 aa4.6□□□□□ -1.67
UBE2D3-226ENST00000508635 FBXL7Q9UJT9 491 aa4.6□□□□□ -1.67
UBE2D3-226ENST00000508635 TIMM13Q9Y5L4 95 aaPredicted RBP4.6□□□□□ -1.67
UBE2D3-226ENST00000508635 HCFC2Q9Y5Z7 792 aa4.6□□□□□ -1.67
UBE2D3-226ENST00000508635 CICQ96RK0 1608 aaPredicted RBP4.6□□□□□ -1.67
UBE2D3-226ENST00000508635 ADAMTS7Q9UKP4 1686 aa4.6□□□□□ -1.67
UBE2D3-226ENST00000508635 COL5A3P25940 1745 aaPredicted RBP4.6□□□□□ -1.67
UBE2D3-226ENST00000508635 SCN11AQ9UI33 1791 aa4.6□□□□□ -1.67
UBE2D3-226ENST00000508635 TRBV23-1A0A0A0MS06 115 aa4.59□□□□□ -1.67
UBE2D3-226ENST00000508635 ZC3H12DA2A288 527 aaKnown RBP4.59□□□□□ -1.67
UBE2D3-226ENST00000508635 F8W031 263 aaPredicted RBP4.59□□□□□ -1.67
UBE2D3-226ENST00000508635 MYO1BO43795 1136 aa4.59□□□□□ -1.67
UBE2D3-226ENST00000508635 MSCO60682 206 aa4.59□□□□□ -1.67
UBE2D3-226ENST00000508635 INHBBP09529 407 aa4.59□□□□□ -1.67
UBE2D3-226ENST00000508635 U2AF1L5P0DN76 240 aaPredicted RBP4.59□□□□□ -1.67
UBE2D3-226ENST00000508635 CYP19A1P11511 503 aaPredicted RBP4.59□□□□□ -1.67
UBE2D3-226ENST00000508635 PRKAR2BP31323 418 aa4.59□□□□□ -1.67
UBE2D3-226ENST00000508635 CORO7P57737 925 aa4.59□□□□□ -1.67
UBE2D3-226ENST00000508635 ERVFRD-1P60508 538 aa4.59□□□□□ -1.67
UBE2D3-226ENST00000508635 RPL11P62913 178 aaKnown RBP4.59□□□□□ -1.67
UBE2D3-226ENST00000508635 U2AF1Q01081 240 aaKnown RBP eCLIP4.59□□□□□ -1.67
UBE2D3-226ENST00000508635 TJP1Q07157 1748 aa4.59□□□□□ -1.67
UBE2D3-226ENST00000508635 DDX10Q13206 875 aaKnown RBP4.59□□□□□ -1.67
UBE2D3-226ENST00000508635 NTRK3Q16288 839 aa4.59□□□□□ -1.67
UBE2D3-226ENST00000508635 ACBD5Q5T8D3 534 aaPredicted RBP4.59□□□□□ -1.67
UBE2D3-226ENST00000508635 KCPQ6ZWJ8 1503 aa4.59□□□□□ -1.67
UBE2D3-226ENST00000508635 CEP68Q76N32 757 aa4.59□□□□□ -1.67
UBE2D3-226ENST00000508635 CEMIPQ8WUJ3 1361 aa4.59□□□□□ -1.67
UBE2D3-226ENST00000508635 BORCS6Q96GS4 357 aa4.59□□□□□ -1.67
UBE2D3-226ENST00000508635 MTA3Q9BTC8 594 aa4.59□□□□□ -1.67
UBE2D3-226ENST00000508635 PHF20Q9BVI0 1012 aa4.59□□□□□ -1.67
UBE2D3-226ENST00000508635 SGPP1Q9BX95 441 aa4.59□□□□□ -1.67
UBE2D3-226ENST00000508635 ZNF552Q9H707 407 aaPredicted RBP4.59□□□□□ -1.67
UBE2D3-226ENST00000508635 USP42Q9H9J4 1324 aaKnown RBP4.59□□□□□ -1.67
UBE2D3-226ENST00000508635 KANSL2Q9H9L4 492 aa4.59□□□□□ -1.67
UBE2D3-226ENST00000508635 KLHL14Q9P2G3 628 aa4.59□□□□□ -1.67
UBE2D3-226ENST00000508635 DBR1Q9UK59 544 aaKnown RBP4.59□□□□□ -1.67
UBE2D3-226ENST00000508635 NUDCQ9Y266 331 aa4.59□□□□□ -1.67
UBE2D3-226ENST00000508635 SOS1Q07889 1333 aaPredicted RBP4.58□□□□□ -1.68
UBE2D3-226ENST00000508635 MYOCOSA0A1B0GUC4 107 aa4.58□□□□□ -1.68
UBE2D3-226ENST00000508635 C22orf46C9J442 243 aa4.58□□□□□ -1.68
UBE2D3-226ENST00000508635 NTRK1P04629 796 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms