RNA–Protein interactions for RNA: ENST00000508531.1

PDLIM5-211, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-211ENST00000508531 AMY2BP19961 511 aa5.94□□□□□ -1.46
PDLIM5-211ENST00000508531 POLD1P28340 1107 aa5.94□□□□□ -1.46
PDLIM5-211ENST00000508531 TOP3AQ13472 1001 aaPredicted RBP5.94□□□□□ -1.46
PDLIM5-211ENST00000508531 FAM209AQ5JX71 171 aa5.94□□□□□ -1.46
PDLIM5-211ENST00000508531 FOXB2Q5VYV0 432 aa5.94□□□□□ -1.46
PDLIM5-211ENST00000508531 PTRH1Q86Y79 214 aaKnown RBP5.94□□□□□ -1.46
PDLIM5-211ENST00000508531 PTPRN2Q92932 1015 aa5.94□□□□□ -1.46
PDLIM5-211ENST00000508531 FBXW5Q969U6 566 aa5.94□□□□□ -1.46
PDLIM5-211ENST00000508531 CBLCQ9ULV8 474 aa5.94□□□□□ -1.46
PDLIM5-211ENST00000508531 TESMINQ9Y4I5 508 aa5.94□□□□□ -1.46
PDLIM5-211ENST00000508531 ARAP3Q8WWN8 1544 aa5.94□□□□□ -1.46
PDLIM5-211ENST00000508531 MAN2B1O00754 1011 aa5.93□□□□□ -1.46
PDLIM5-211ENST00000508531 KCNK3O14649 394 aa5.93□□□□□ -1.46
PDLIM5-211ENST00000508531 FZD7O75084 574 aa5.93□□□□□ -1.46
PDLIM5-211ENST00000508531 SLPIP03973 132 aa5.93□□□□□ -1.46
PDLIM5-211ENST00000508531 C6orf222P0C671 652 aaPredicted RBP5.93□□□□□ -1.46
PDLIM5-211ENST00000508531 SRGAP2CP0DJJ0 459 aa5.93□□□□□ -1.46
PDLIM5-211ENST00000508531 PDE6AP16499 860 aa5.93□□□□□ -1.46
PDLIM5-211ENST00000508531 ACVRL1P37023 503 aa5.93□□□□□ -1.46
PDLIM5-211ENST00000508531 HMGA2P52926 109 aa5.93□□□□□ -1.46
PDLIM5-211ENST00000508531 SUMO1P63165 101 aaKnown RBP5.93□□□□□ -1.46
PDLIM5-211ENST00000508531 GUCY1A3Q02108 690 aa5.93□□□□□ -1.46
PDLIM5-211ENST00000508531 SSRP1Q08945 709 aaKnown RBP5.93□□□□□ -1.46
PDLIM5-211ENST00000508531 RASGRF1Q13972 1273 aa5.93□□□□□ -1.46
PDLIM5-211ENST00000508531 NOLC1Q14978 699 aaKnown RBP eCLIP5.93□□□□□ -1.46
PDLIM5-211ENST00000508531 RNF151Q2KHN1 245 aa5.93□□□□□ -1.46
PDLIM5-211ENST00000508531 HS1BP3Q53T59 392 aa5.93□□□□□ -1.46
PDLIM5-211ENST00000508531 DPP8Q6V1X1 898 aaPredicted RBP5.93□□□□□ -1.46
PDLIM5-211ENST00000508531 EP400NLQ6ZTU2 488 aa5.93□□□□□ -1.46
PDLIM5-211ENST00000508531 OSTM1Q86WC4 334 aa5.93□□□□□ -1.46
PDLIM5-211ENST00000508531 FAM43AQ8N2R8 423 aa5.93□□□□□ -1.46
PDLIM5-211ENST00000508531 PCDH19Q8TAB3 1148 aa5.93□□□□□ -1.46
PDLIM5-211ENST00000508531 IPO9Q96P70 1041 aaKnown RBP5.93□□□□□ -1.46
PDLIM5-211ENST00000508531 PPP1R1BQ9UD71 204 aaPredicted RBP5.93□□□□□ -1.46
PDLIM5-211ENST00000508531 ATP23Q9Y6H3 246 aa5.93□□□□□ -1.46
PDLIM5-211ENST00000508531 WASHC2AQ641Q2 1341 aa5.93□□□□□ -1.46
PDLIM5-211ENST00000508531 WASHC2CQ9Y4E1 1318 aa5.93□□□□□ -1.46
PDLIM5-211ENST00000508531 STRCQ7RTU9 1775 aa5.93□□□□□ -1.46
PDLIM5-211ENST00000508531 MED1Q15648 1581 aaPredicted RBP5.93□□□□□ -1.46
PDLIM5-211ENST00000508531 CEP162Q5TB80 1403 aa5.92□□□□□ -1.46
PDLIM5-211ENST00000508531 ARVCFO00192 962 aa5.92□□□□□ -1.46
PDLIM5-211ENST00000508531 CYR61O00622 381 aa5.92□□□□□ -1.46
PDLIM5-211ENST00000508531 WNT9AO14904 365 aa5.92□□□□□ -1.46
PDLIM5-211ENST00000508531 DIAPH1O60610 1272 aaKnown RBP5.92□□□□□ -1.46
PDLIM5-211ENST00000508531 CUTAO60888 179 aa5.92□□□□□ -1.46
PDLIM5-211ENST00000508531 JAM2P57087 298 aa5.92□□□□□ -1.46
PDLIM5-211ENST00000508531 RAC3P60763 192 aa5.92□□□□□ -1.46
PDLIM5-211ENST00000508531 ST5P78524 1137 aa5.92□□□□□ -1.46
PDLIM5-211ENST00000508531 WDR72Q3MJ13 1102 aa5.92□□□□□ -1.46
PDLIM5-211ENST00000508531 FIGNQ5HY92 759 aa5.92□□□□□ -1.46
PDLIM5-211ENST00000508531 FUKQ8N0W3 1084 aa5.92□□□□□ -1.46
PDLIM5-211ENST00000508531 ZBTB38Q8NAP3 1195 aaPredicted RBP5.92□□□□□ -1.46
PDLIM5-211ENST00000508531 ADOQ96SZ5 270 aa5.92□□□□□ -1.46
PDLIM5-211ENST00000508531 IGSF5Q9NSI5 407 aa5.92□□□□□ -1.46
PDLIM5-211ENST00000508531 PCDHA9Q9Y5H5 950 aa5.92□□□□□ -1.46
PDLIM5-211ENST00000508531 ZNF335Q9H4Z2 1342 aaPredicted RBP5.92□□□□□ -1.46
PDLIM5-211ENST00000508531 DISP1Q96F81 1524 aa5.91□□□□□ -1.46
PDLIM5-211ENST00000508531 PRAMEF25A6NGN4 478 aa5.91□□□□□ -1.46
PDLIM5-211ENST00000508531 RRP9O43818 475 aaKnown RBP5.91□□□□□ -1.46
PDLIM5-211ENST00000508531 PTGS1P23219 599 aa5.91□□□□□ -1.46
PDLIM5-211ENST00000508531 MC4RP32245 332 aa5.91□□□□□ -1.46
PDLIM5-211ENST00000508531 GJA4P35212 333 aa5.91□□□□□ -1.46
PDLIM5-211ENST00000508531 ADCY8P40145 1251 aa5.91□□□□□ -1.46
PDLIM5-211ENST00000508531 DNM2P50570 870 aa5.91□□□□□ -1.46
PDLIM5-211ENST00000508531 IL13RA1P78552 427 aa5.91□□□□□ -1.46
PDLIM5-211ENST00000508531 PRKD1Q15139 912 aaPredicted RBP5.91□□□□□ -1.46
PDLIM5-211ENST00000508531 CRY1Q16526 586 aa5.91□□□□□ -1.46
PDLIM5-211ENST00000508531 USP51Q70EK9 711 aa5.91□□□□□ -1.46
PDLIM5-211ENST00000508531 C16orf59Q7L2K0 433 aa5.91□□□□□ -1.46
PDLIM5-211ENST00000508531 EXOC2Q96KP1 924 aa5.91□□□□□ -1.46
PDLIM5-211ENST00000508531 MRIQ9BWK5 157 aa5.91□□□□□ -1.46
PDLIM5-211ENST00000508531 HS3ST3A1Q9Y663 406 aa5.91□□□□□ -1.46
PDLIM5-211ENST00000508531 LTBP4Q8N2S1 1624 aa5.91□□□□□ -1.46
PDLIM5-211ENST00000508531 CCDC66A2RUB6 948 aa5.9□□□□□ -1.46
PDLIM5-211ENST00000508531 SUV39H1O43463 412 aa5.9□□□□□ -1.46
PDLIM5-211ENST00000508531 C4BPAP04003 597 aaKnown RBP5.9□□□□□ -1.46
PDLIM5-211ENST00000508531 FAM153BP0C7A2 387 aa5.9□□□□□ -1.46
PDLIM5-211ENST00000508531 AOAHP28039 575 aa5.9□□□□□ -1.46
PDLIM5-211ENST00000508531 ETV4P43268 484 aa5.9□□□□□ -1.46
PDLIM5-211ENST00000508531 NAALADL2Q58DX5 795 aa5.9□□□□□ -1.46
PDLIM5-211ENST00000508531 ZMAT1Q5H9K5 638 aa5.9□□□□□ -1.46
PDLIM5-211ENST00000508531 DPYSL5Q9BPU6 564 aa5.9□□□□□ -1.46
PDLIM5-211ENST00000508531 ZNF341Q9BYN7 854 aa5.9□□□□□ -1.46
PDLIM5-211ENST00000508531 CCDC113Q9H0I3 377 aa5.9□□□□□ -1.46
PDLIM5-211ENST00000508531 INCENPQ9NQS7 918 aa5.9□□□□□ -1.46
PDLIM5-211ENST00000508531 RGS17Q9UGC6 210 aaPredicted RBP5.9□□□□□ -1.46
PDLIM5-211ENST00000508531 OAZ3Q9UMX2 235 aa5.9□□□□□ -1.46
PDLIM5-211ENST00000508531 NR2E1Q9Y466 385 aa5.9□□□□□ -1.46
PDLIM5-211ENST00000508531 CARMIL1Q5VZK9 1371 aa5.9□□□□□ -1.47
PDLIM5-211ENST00000508531 CFAP43Q8NDM7 1665 aa5.89□□□□□ -1.47
PDLIM5-211ENST00000508531 ZNF561-AS1K7EIQ3 104 aa5.89□□□□□ -1.47
PDLIM5-211ENST00000508531 ANP32CO43423 234 aa5.89□□□□□ -1.47
PDLIM5-211ENST00000508531 CRTAMO95727 393 aa5.89□□□□□ -1.47
PDLIM5-211ENST00000508531 NCLP19338 710 aaKnown RBP5.89□□□□□ -1.47
PDLIM5-211ENST00000508531 CR2P20023 1033 aa5.89□□□□□ -1.47
PDLIM5-211ENST00000508531 COMTP21964 271 aa5.89□□□□□ -1.47
PDLIM5-211ENST00000508531 KCNQ1P51787 676 aa5.89□□□□□ -1.47
PDLIM5-211ENST00000508531 ZC3H6P61129 1189 aaKnown RBP5.89□□□□□ -1.47
PDLIM5-211ENST00000508531 GABREP78334 506 aa5.89□□□□□ -1.47
PDLIM5-211ENST00000508531 TBR1Q16650 682 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms