RNA–Protein interactions for RNA: ENST00000508524.1

TOPBP1-206, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 618 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-206ENST00000508524 C8orf49Q96NF6 230 aa7.83□□□□□ -1.16
TOPBP1-206ENST00000508524 JADE2Q9NQC1 790 aa7.83□□□□□ -1.16
TOPBP1-206ENST00000508524 FANCLQ9NW38 375 aa7.83□□□□□ -1.16
TOPBP1-206ENST00000508524 MAGEC2Q9UBF1 373 aaPredicted RBP7.83□□□□□ -1.16
TOPBP1-206ENST00000508524 PTPDC1A2A3K4 754 aa7.82□□□□□ -1.16
TOPBP1-206ENST00000508524 CBX4O00257 560 aa7.82□□□□□ -1.16
TOPBP1-206ENST00000508524 ICAM4Q14773 271 aa7.82□□□□□ -1.16
TOPBP1-206ENST00000508524 EIF4HQ15056 248 aaKnown RBP7.82□□□□□ -1.16
TOPBP1-206ENST00000508524 CDCA2Q69YH5 1023 aaPredicted RBP7.82□□□□□ -1.16
TOPBP1-206ENST00000508524 TMEM200BQ69YZ2 307 aa7.82□□□□□ -1.16
TOPBP1-206ENST00000508524 CIR1Q86X95 450 aaPredicted RBP7.82□□□□□ -1.16
TOPBP1-206ENST00000508524 DNERQ8NFT8 737 aa7.82□□□□□ -1.16
TOPBP1-206ENST00000508524 SEC61A2Q9H9S3 476 aa7.82□□□□□ -1.16
TOPBP1-206ENST00000508524 CABP5Q9NP86 173 aa7.82□□□□□ -1.16
TOPBP1-206ENST00000508524 INTS7Q9NVH2 962 aaKnown RBP7.82□□□□□ -1.16
TOPBP1-206ENST00000508524 MRPL42Q9Y6G3 142 aaKnown RBP7.82□□□□□ -1.16
TOPBP1-206ENST00000508524 FAM83GA6ND36 823 aa7.81□□□□□ -1.16
TOPBP1-206ENST00000508524 HMGCRP04035 888 aa7.81□□□□□ -1.16
TOPBP1-206ENST00000508524 FNTBP49356 437 aa7.81□□□□□ -1.16
TOPBP1-206ENST00000508524 KCNQ1P51787 676 aa7.81□□□□□ -1.16
TOPBP1-206ENST00000508524 KIF11P52732 1056 aa7.81□□□□□ -1.16
TOPBP1-206ENST00000508524 MOGSQ13724 837 aa7.81□□□□□ -1.16
TOPBP1-206ENST00000508524 C21orf62-AS1Q17RA5 79 aa7.81□□□□□ -1.16
TOPBP1-206ENST00000508524 C16orf86Q6ZW13 317 aa7.81□□□□□ -1.16
TOPBP1-206ENST00000508524 LARP4Q71RC2 724 aaKnown RBP eCLIP7.81□□□□□ -1.16
TOPBP1-206ENST00000508524 APPBP2Q92624 585 aa7.81□□□□□ -1.16
TOPBP1-206ENST00000508524 ERCC4Q92889 916 aaPredicted RBP7.81□□□□□ -1.16
TOPBP1-206ENST00000508524 CD248Q9HCU0 757 aa7.81□□□□□ -1.16
TOPBP1-206ENST00000508524 B4GALT6Q9UBX8 382 aa7.81□□□□□ -1.16
TOPBP1-206ENST00000508524 ST6GALNAC2Q9UJ37 374 aa7.81□□□□□ -1.16
TOPBP1-206ENST00000508524 CDC42EP3Q9UKI2 254 aa7.81□□□□□ -1.16
TOPBP1-206ENST00000508524 FLT3P36888 993 aa7.8□□□□□ -1.16
TOPBP1-206ENST00000508524 RRADP55042 308 aa7.8□□□□□ -1.16
TOPBP1-206ENST00000508524 ALDH6A1Q02252 535 aaKnown RBP7.8□□□□□ -1.16
TOPBP1-206ENST00000508524 RNF151Q2KHN1 245 aa7.8□□□□□ -1.16
TOPBP1-206ENST00000508524 CREB3L3Q68CJ9 461 aa7.8□□□□□ -1.16
TOPBP1-206ENST00000508524 OTOP2Q7RTS6 562 aa7.8□□□□□ -1.16
TOPBP1-206ENST00000508524 ORAI3Q9BRQ5 295 aa7.8□□□□□ -1.16
TOPBP1-206ENST00000508524 C1QTNF3Q9BXJ4 246 aa7.8□□□□□ -1.16
TOPBP1-206ENST00000508524 A0A0G2JNJ9 132 aa7.79□□□□□ -1.16
TOPBP1-206ENST00000508524 PATE3B3GLJ2 98 aa7.79□□□□□ -1.16
TOPBP1-206ENST00000508524 MAFO75444 373 aaPredicted RBP7.79□□□□□ -1.16
TOPBP1-206ENST00000508524 CFAP100Q494V2 611 aa7.79□□□□□ -1.16
TOPBP1-206ENST00000508524 ZMAT1Q5H9K5 638 aa7.79□□□□□ -1.16
TOPBP1-206ENST00000508524 TRIM68Q6AZZ1 485 aa7.79□□□□□ -1.16
TOPBP1-206ENST00000508524 GRAMD4Q6IC98 578 aa7.79□□□□□ -1.16
TOPBP1-206ENST00000508524 UBE2R2Q712K3 238 aaPredicted RBP7.79□□□□□ -1.16
TOPBP1-206ENST00000508524 WDR48Q8TAF3 677 aa7.79□□□□□ -1.16
TOPBP1-206ENST00000508524 CALML6Q8TD86 181 aa7.79□□□□□ -1.16
TOPBP1-206ENST00000508524 SCYL1Q96KG9 808 aa7.79□□□□□ -1.16
TOPBP1-206ENST00000508524 LRRC37BQ96QE4 947 aa7.79□□□□□ -1.16
TOPBP1-206ENST00000508524 LMF1Q96S06 567 aa7.79□□□□□ -1.16
TOPBP1-206ENST00000508524 FOXB1Q99853 325 aa7.79□□□□□ -1.16
TOPBP1-206ENST00000508524 KIAA1683Q9H0B3 1180 aa7.79□□□□□ -1.16
TOPBP1-206ENST00000508524 ACSS2Q9NR19 701 aa7.79□□□□□ -1.16
TOPBP1-206ENST00000508524 Q9UFV3 132 aa7.79□□□□□ -1.16
TOPBP1-206ENST00000508524 H7C1D1 291 aa7.78□□□□□ -1.16
TOPBP1-206ENST00000508524 PRLP01236 227 aa7.78□□□□□ -1.16
TOPBP1-206ENST00000508524 ZNF20P17024 532 aa7.78□□□□□ -1.16
TOPBP1-206ENST00000508524 APEX1P27695 318 aaKnown RBP7.78□□□□□ -1.16
TOPBP1-206ENST00000508524 TBR1Q16650 682 aa7.78□□□□□ -1.16
TOPBP1-206ENST00000508524 ZNF568Q3ZCX4 644 aa7.78□□□□□ -1.16
TOPBP1-206ENST00000508524 BCL6BQ8N143 479 aaPredicted RBP7.78□□□□□ -1.16
TOPBP1-206ENST00000508524 KIAA1958Q8N8K9 716 aa7.78□□□□□ -1.16
TOPBP1-206ENST00000508524 NINJ1Q92982 152 aa7.78□□□□□ -1.16
TOPBP1-206ENST00000508524 NEIL1Q96FI4 390 aaPredicted RBP7.78□□□□□ -1.16
TOPBP1-206ENST00000508524 WWC2-AS2Q96NR7 200 aa7.78□□□□□ -1.16
TOPBP1-206ENST00000508524 GNRHR2Q96P88 292 aa7.78□□□□□ -1.16
TOPBP1-206ENST00000508524 KRTAP4-11Q9BYQ6 195 aa7.78□□□□□ -1.16
TOPBP1-206ENST00000508524 CDC45O75419 566 aa7.77□□□□□ -1.17
TOPBP1-206ENST00000508524 POU3F2P20265 443 aaPredicted RBP7.77□□□□□ -1.17
TOPBP1-206ENST00000508524 RANGAP1P46060 587 aaPredicted RBP7.77□□□□□ -1.17
TOPBP1-206ENST00000508524 RAC3P60763 192 aa7.77□□□□□ -1.17
TOPBP1-206ENST00000508524 NOLC1Q14978 699 aaKnown RBP eCLIP7.77□□□□□ -1.17
TOPBP1-206ENST00000508524 GGNQ86UU5 652 aa7.77□□□□□ -1.17
TOPBP1-206ENST00000508524 LRRTM3Q86VH5 581 aa7.77□□□□□ -1.17
TOPBP1-206ENST00000508524 CHST13Q8NET6 341 aa7.77□□□□□ -1.17
TOPBP1-206ENST00000508524 C16orf92Q96LL3 132 aa7.77□□□□□ -1.17
TOPBP1-206ENST00000508524 KRTAP4-2Q9BYR5 136 aa7.77□□□□□ -1.17
TOPBP1-206ENST00000508524 PCIF1Q9H4Z3 704 aa7.77□□□□□ -1.17
TOPBP1-206ENST00000508524 MATN2O00339 956 aa7.76□□□□□ -1.17
TOPBP1-206ENST00000508524 PTX3P26022 381 aaPredicted RBP7.76□□□□□ -1.17
TOPBP1-206ENST00000508524 NFYCQ13952 458 aa7.76□□□□□ -1.17
TOPBP1-206ENST00000508524 PCOLCEQ15113 449 aa7.76□□□□□ -1.17
TOPBP1-206ENST00000508524 AGBL4Q5VU57 503 aa7.76□□□□□ -1.17
TOPBP1-206ENST00000508524 TCTN3Q6NUS6 607 aa7.76□□□□□ -1.17
TOPBP1-206ENST00000508524 CFHR4Q92496 578 aa7.76□□□□□ -1.17
TOPBP1-206ENST00000508524 DVL3Q92997 716 aaPredicted RBP7.76□□□□□ -1.17
TOPBP1-206ENST00000508524 MTFR1LQ9H019 292 aa7.76□□□□□ -1.17
TOPBP1-206ENST00000508524 ARHGAP6O43182 974 aa7.75□□□□□ -1.17
TOPBP1-206ENST00000508524 FOXS1O43638 330 aa7.75□□□□□ -1.17
TOPBP1-206ENST00000508524 KPNA6O60684 536 aa7.75□□□□□ -1.17
TOPBP1-206ENST00000508524 CYP17A1P05093 508 aa7.75□□□□□ -1.17
TOPBP1-206ENST00000508524 ATP2A2P16615 1042 aaKnown RBP7.75□□□□□ -1.17
TOPBP1-206ENST00000508524 SLC9A1P19634 815 aa7.75□□□□□ -1.17
TOPBP1-206ENST00000508524 RGS3P49796 1198 aa7.75□□□□□ -1.17
TOPBP1-206ENST00000508524 MRE11P49959 708 aa7.75□□□□□ -1.17
TOPBP1-206ENST00000508524 STAT5BP51692 787 aa7.75□□□□□ -1.17
TOPBP1-206ENST00000508524 SLC6A3Q01959 620 aa7.75□□□□□ -1.17
TOPBP1-206ENST00000508524 CDSNQ15517 529 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms