RNA–Protein interactions for RNA: ENST00000508238.5

UBE2D3-222, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-222ENST00000508238 ZNF215Q9UL58 517 aaPredicted RBP9.09□□□□□ -0.95
UBE2D3-222ENST00000508238 NFASCO94856 1347 aa9.08□□□□□ -0.96
UBE2D3-222ENST00000508238 NRCAMQ92823 1304 aa9.08□□□□□ -0.96
UBE2D3-222ENST00000508238 EYSQ5T1H1 3165 aa9.08□□□□□ -0.96
UBE2D3-222ENST00000508238 RSPH10B2B2RC85 870 aa9.08□□□□□ -0.96
UBE2D3-222ENST00000508238 RNF223E7ERA6 249 aa9.08□□□□□ -0.96
UBE2D3-222ENST00000508238 TREHO43280 583 aa9.08□□□□□ -0.96
UBE2D3-222ENST00000508238 TRAK2O60296 914 aa9.08□□□□□ -0.96
UBE2D3-222ENST00000508238 LGR5O75473 907 aa9.08□□□□□ -0.96
UBE2D3-222ENST00000508238 RSPH10BP0C881 870 aa9.08□□□□□ -0.96
UBE2D3-222ENST00000508238 SCG2P13521 617 aa9.08□□□□□ -0.96
UBE2D3-222ENST00000508238 CPA1P15085 419 aa9.08□□□□□ -0.96
UBE2D3-222ENST00000508238 POU3F3P20264 500 aaPredicted RBP9.08□□□□□ -0.96
UBE2D3-222ENST00000508238 SREBF1P36956 1147 aa9.08□□□□□ -0.96
UBE2D3-222ENST00000508238 RABGGTBP53611 331 aa9.08□□□□□ -0.96
UBE2D3-222ENST00000508238 APOBRQ0VD83 1088 aa9.08□□□□□ -0.96
UBE2D3-222ENST00000508238 NTRK3Q16288 839 aa9.08□□□□□ -0.96
UBE2D3-222ENST00000508238 PKN1Q16512 942 aa9.08□□□□□ -0.96
UBE2D3-222ENST00000508238 CEP55Q53EZ4 464 aa9.08□□□□□ -0.96
UBE2D3-222ENST00000508238 NIPA1Q7RTP0 329 aa9.08□□□□□ -0.96
UBE2D3-222ENST00000508238 HERC6Q8IVU3 1022 aa9.08□□□□□ -0.96
UBE2D3-222ENST00000508238 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.08□□□□□ -0.964e-11■□□□□ 10.1
UBE2D3-222ENST00000508238 ZMYND12Q9H0C1 365 aa9.08□□□□□ -0.96
UBE2D3-222ENST00000508238 NKX2-4Q9H2Z4 354 aa9.08□□□□□ -0.96
UBE2D3-222ENST00000508238 SMARCAD1Q9H4L7 1026 aa9.08□□□□□ -0.96
UBE2D3-222ENST00000508238 SETD4Q9NVD3 440 aa9.08□□□□□ -0.96
UBE2D3-222ENST00000508238 TELO2Q9Y4R8 837 aa9.08□□□□□ -0.96
UBE2D3-222ENST00000508238 MICAL3Q7RTP6 2002 aa9.08□□□□□ -0.96
UBE2D3-222ENST00000508238 MYH9P35579 1960 aaKnown RBP9.08□□□□□ -0.96
UBE2D3-222ENST00000508238 MBLAC1A4D2B0 266 aaPredicted RBP9.07□□□□□ -0.96
UBE2D3-222ENST00000508238 KIF28PB7ZC32 967 aa9.07□□□□□ -0.96
UBE2D3-222ENST00000508238 DLL1O00548 723 aa9.07□□□□□ -0.96
UBE2D3-222ENST00000508238 EIF5BO60841 1220 aaKnown RBP9.07□□□□□ -0.96
UBE2D3-222ENST00000508238 GPR37L1O60883 481 aa9.07□□□□□ -0.96
UBE2D3-222ENST00000508238 CYP3A4P08684 503 aa9.07□□□□□ -0.96
UBE2D3-222ENST00000508238 MYOGP15173 224 aa9.07□□□□□ -0.96
UBE2D3-222ENST00000508238 IFNAR1P17181 557 aa9.07□□□□□ -0.96
UBE2D3-222ENST00000508238 PDIA3P30101 505 aaKnown RBP9.07□□□□□ -0.96
UBE2D3-222ENST00000508238 TCF7P36402 384 aaPredicted RBP9.07□□□□□ -0.96
UBE2D3-222ENST00000508238 THPOP40225 353 aa9.07□□□□□ -0.96
UBE2D3-222ENST00000508238 KCNJ6P48051 423 aa9.07□□□□□ -0.96
UBE2D3-222ENST00000508238 WDR5P61964 334 aaKnown RBP9.07□□□□□ -0.96
UBE2D3-222ENST00000508238 IKBKEQ14164 716 aa9.07□□□□□ -0.96
UBE2D3-222ENST00000508238 ADGRE1Q14246 886 aa9.07□□□□□ -0.96
UBE2D3-222ENST00000508238 FAM26DQ5JW98 314 aa9.07□□□□□ -0.96
UBE2D3-222ENST00000508238 TAF2Q6P1X5 1199 aa9.07□□□□□ -0.96
UBE2D3-222ENST00000508238 RUFY3Q7L099 469 aa9.07□□□□□ -0.96
UBE2D3-222ENST00000508238 TRIM50Q86XT4 487 aa9.07□□□□□ -0.96
UBE2D3-222ENST00000508238 CYP2W1Q8TAV3 490 aa9.07□□□□□ -0.96
UBE2D3-222ENST00000508238 CCDC12Q8WUD4 166 aaPredicted RBP9.07□□□□□ -0.96
UBE2D3-222ENST00000508238 LMBR1Q8WVP7 490 aa9.07□□□□□ -0.96
UBE2D3-222ENST00000508238 GAS2L1Q99501 681 aaPredicted RBP9.07□□□□□ -0.96
UBE2D3-222ENST00000508238 RNF26Q9BY78 433 aaPredicted RBP9.07□□□□□ -0.96
UBE2D3-222ENST00000508238 ANO3Q9BYT9 981 aa9.07□□□□□ -0.96
UBE2D3-222ENST00000508238 PRDM12Q9H4Q4 367 aa9.07□□□□□ -0.96
UBE2D3-222ENST00000508238 JPH1Q9HDC5 661 aaPredicted RBP9.07□□□□□ -0.96
UBE2D3-222ENST00000508238 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.07□□□□□ -0.96
UBE2D3-222ENST00000508238 PPP4R2Q9NY27 417 aa9.07□□□□□ -0.96
UBE2D3-222ENST00000508238 ERAP1Q9NZ08 941 aa9.07□□□□□ -0.96
UBE2D3-222ENST00000508238 FKBPLQ9UIM3 349 aa9.07□□□□□ -0.96
UBE2D3-222ENST00000508238 TTC3P53804 2025 aa9.07□□□□□ -0.96
UBE2D3-222ENST00000508238 PTPRSQ13332 1948 aa9.06□□□□□ -0.96
UBE2D3-222ENST00000508238 EVPLQ92817 2033 aa9.06□□□□□ -0.96
UBE2D3-222ENST00000508238 RRN3P2A6NIE6 340 aa9.06□□□□□ -0.96
UBE2D3-222ENST00000508238 ATG7O95352 703 aa9.06□□□□□ -0.96
UBE2D3-222ENST00000508238 GJB5O95377 273 aa9.06□□□□□ -0.96
UBE2D3-222ENST00000508238 RPLP2P05387 115 aaKnown RBP9.06□□□□□ -0.96
UBE2D3-222ENST00000508238 CA3P07451 260 aa9.06□□□□□ -0.96
UBE2D3-222ENST00000508238 ARP10275 920 aa9.06□□□□□ -0.96
UBE2D3-222ENST00000508238 GNA11P29992 359 aa9.06□□□□□ -0.96
UBE2D3-222ENST00000508238 SLC26A2P50443 739 aa9.06□□□□□ -0.96
UBE2D3-222ENST00000508238 ARHGAP4P98171 946 aa9.06□□□□□ -0.96
UBE2D3-222ENST00000508238 SP4Q02446 784 aa9.06□□□□□ -0.96
UBE2D3-222ENST00000508238 TCTN1Q2MV58 587 aa9.06□□□□□ -0.96
UBE2D3-222ENST00000508238 PLEKHG4Q58EX7 1191 aa9.06□□□□□ -0.96
UBE2D3-222ENST00000508238 UTP14CQ5TAP6 766 aaKnown RBP9.06□□□□□ -0.96
UBE2D3-222ENST00000508238 PLPPR4Q7Z2D5 763 aa9.06□□□□□ -0.96
UBE2D3-222ENST00000508238 FAM177A1Q8N128 213 aaPredicted RBP9.06□□□□□ -0.96
UBE2D3-222ENST00000508238 TNPO1Q92973 898 aaKnown RBP9.06□□□□□ -0.96
UBE2D3-222ENST00000508238 ZNF274Q96GC6 653 aaPredicted RBP9.06□□□□□ -0.96
UBE2D3-222ENST00000508238 PCYT2Q99447 389 aa9.06□□□□□ -0.96
UBE2D3-222ENST00000508238 SDF4Q9BRK5 362 aa9.06□□□□□ -0.96
UBE2D3-222ENST00000508238 AGO4Q9HCK5 861 aaKnown RBP9.06□□□□□ -0.96
UBE2D3-222ENST00000508238 C6orf50Q9HD87 102 aa9.06□□□□□ -0.96
UBE2D3-222ENST00000508238 SH3GLB2Q9NR46 395 aa9.06□□□□□ -0.96
UBE2D3-222ENST00000508238 SLC9A2Q9UBY0 812 aa9.06□□□□□ -0.96
UBE2D3-222ENST00000508238 NAP1L2Q9ULW6 460 aaPredicted RBP9.06□□□□□ -0.96
UBE2D3-222ENST00000508238 CYP46A1Q9Y6A2 500 aa9.06□□□□□ -0.96
UBE2D3-222ENST00000508238 IGLV3-22A0A075B6J6 115 aa9.05□□□□□ -0.96
UBE2D3-222ENST00000508238 IGKV6D-21A0A0A0MT36 114 aa9.05□□□□□ -0.96
UBE2D3-222ENST00000508238 FAM86B1E9PN63 330 aa9.05□□□□□ -0.96
UBE2D3-222ENST00000508238 DHX15O43143 795 aaKnown RBP9.05□□□□□ -0.96
UBE2D3-222ENST00000508238 FAM86B2P0C5J1 330 aa9.05□□□□□ -0.96
UBE2D3-222ENST00000508238 CIITAP33076 1130 aa9.05□□□□□ -0.96
UBE2D3-222ENST00000508238 ACTR2P61160 394 aa9.05□□□□□ -0.96
UBE2D3-222ENST00000508238 TAP1Q03518 808 aa9.05□□□□□ -0.96
UBE2D3-222ENST00000508238 PPFIA1Q13136 1202 aa9.05□□□□□ -0.96
UBE2D3-222ENST00000508238 ITGB3BPQ13352 177 aaPredicted RBP9.05□□□□□ -0.96
UBE2D3-222ENST00000508238 TOB2Q14106 344 aaPredicted RBP9.05□□□□□ -0.96
UBE2D3-222ENST00000508238 MARCH8Q5T0T0 291 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms