RNA–Protein interactions for RNA: ENST00000507449.1

LSM6-205, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 371 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-205ENST00000507449 PTGS1P23219 599 aa4.7□□□□□ -1.66
LSM6-205ENST00000507449 IGFBP6P24592 240 aaPredicted RBP4.7□□□□□ -1.66
LSM6-205ENST00000507449 SCAND1P57086 179 aa4.7□□□□□ -1.66
LSM6-205ENST00000507449 PFKPQ01813 784 aa4.7□□□□□ -1.66
LSM6-205ENST00000507449 FAPQ12884 760 aa4.7□□□□□ -1.66
LSM6-205ENST00000507449 MYBPC3Q14896 1274 aa4.7□□□□□ -1.66
LSM6-205ENST00000507449 RTP5Q14D33 572 aa4.7□□□□□ -1.66
LSM6-205ENST00000507449 PRAMEF18Q5VWM3 479 aa4.7□□□□□ -1.66
LSM6-205ENST00000507449 LRSAM1Q6UWE0 723 aa4.7□□□□□ -1.66
LSM6-205ENST00000507449 TMC5Q6UXY8 1006 aa4.7□□□□□ -1.66
LSM6-205ENST00000507449 CD300LDQ6UXZ3 194 aa4.7□□□□□ -1.66
LSM6-205ENST00000507449 DBX2Q6ZNG2 339 aa4.7□□□□□ -1.66
LSM6-205ENST00000507449 FRMD7Q6ZUT3 714 aa4.7□□□□□ -1.66
LSM6-205ENST00000507449 CXorf67Q86X51 503 aaPredicted RBP4.7□□□□□ -1.66
LSM6-205ENST00000507449 IGDCC3Q8IVU1 814 aa4.7□□□□□ -1.66
LSM6-205ENST00000507449 DTX3Q8N9I9 347 aa4.7□□□□□ -1.66
LSM6-205ENST00000507449 C1orf162Q8NEQ5 155 aaPredicted RBP4.7□□□□□ -1.66
LSM6-205ENST00000507449 ORAI2Q96SN7 254 aa4.7□□□□□ -1.66
LSM6-205ENST00000507449 SGPP1Q9BX95 441 aa4.7□□□□□ -1.66
LSM6-205ENST00000507449 KRTAP9-3Q9BYQ3 159 aa4.7□□□□□ -1.66
LSM6-205ENST00000507449 RNF38Q9H0F5 515 aa4.7□□□□□ -1.66
LSM6-205ENST00000507449 EPB41L4BQ9H329 900 aa4.7□□□□□ -1.66
LSM6-205ENST00000507449 POFUT1Q9H488 388 aa4.7□□□□□ -1.66
LSM6-205ENST00000507449 PRDM12Q9H4Q4 367 aa4.7□□□□□ -1.66
LSM6-205ENST00000507449 UCKL1Q9NWZ5 548 aa4.7□□□□□ -1.66
LSM6-205ENST00000507449 JAG2Q9Y219 1238 aa4.7□□□□□ -1.66
LSM6-205ENST00000507449 PPP2R3BQ9Y5P8 575 aa4.7□□□□□ -1.66
LSM6-205ENST00000507449 UBA6A0AVT1 1052 aaPredicted RBP4.69□□□□□ -1.66
LSM6-205ENST00000507449 PCDHGA12O60330 932 aa4.69□□□□□ -1.66
LSM6-205ENST00000507449 CLEC2LP0C7M8 214 aa4.69□□□□□ -1.66
LSM6-205ENST00000507449 MYBL2P10244 700 aa4.69□□□□□ -1.66
LSM6-205ENST00000507449 NCAM1P13591 858 aa4.69□□□□□ -1.66
LSM6-205ENST00000507449 RGS3P49796 1198 aa4.69□□□□□ -1.66
LSM6-205ENST00000507449 RAB27AP51159 221 aa4.69□□□□□ -1.66
LSM6-205ENST00000507449 EPHB1P54762 984 aa4.69□□□□□ -1.66
LSM6-205ENST00000507449 MANFP55145 182 aaKnown RBP4.69□□□□□ -1.66
LSM6-205ENST00000507449 NKX3-2P78367 333 aa4.69□□□□□ -1.66
LSM6-205ENST00000507449 ALDH6A1Q02252 535 aaKnown RBP4.69□□□□□ -1.66
LSM6-205ENST00000507449 LRRC41Q15345 812 aa4.69□□□□□ -1.66
LSM6-205ENST00000507449 PCBP2Q15366 365 aaKnown RBP eCLIP4.69□□□□□ -1.66
LSM6-205ENST00000507449 NFE2Q16621 373 aaPredicted RBP4.69□□□□□ -1.66
LSM6-205ENST00000507449 PHF19Q5T6S3 580 aa4.69□□□□□ -1.66
LSM6-205ENST00000507449 OLFML2BQ68BL8 750 aa4.69□□□□□ -1.66
LSM6-205ENST00000507449 UNQ6494/PRO21346Q6UXR6 183 aa4.69□□□□□ -1.66
LSM6-205ENST00000507449 SIAH1Q8IUQ4 282 aa4.69□□□□□ -1.66
LSM6-205ENST00000507449 HIPK4Q8NE63 616 aa4.69□□□□□ -1.66
LSM6-205ENST00000507449 SMARCC2Q8TAQ2 1214 aa4.69□□□□□ -1.66
LSM6-205ENST00000507449 MZB1Q8WU39 189 aa4.69□□□□□ -1.66
LSM6-205ENST00000507449 TGFBRAP1Q8WUH2 860 aa4.69□□□□□ -1.66
LSM6-205ENST00000507449 HOOK2Q96ED9 719 aa4.69□□□□□ -1.66
LSM6-205ENST00000507449 DDX11Q96FC9 970 aa4.69□□□□□ -1.66
LSM6-205ENST00000507449 FUBP3Q96I24 572 aaKnown RBP eCLIP4.69□□□□□ -1.66
LSM6-205ENST00000507449 MYL10Q9BUA6 226 aa4.69□□□□□ -1.66
LSM6-205ENST00000507449 RTFDC1Q9BY42 306 aaPredicted RBP4.69□□□□□ -1.66
LSM6-205ENST00000507449 DCP1AQ9NPI6 582 aaPredicted RBP4.69□□□□□ -1.66
LSM6-205ENST00000507449 ARHGAP28Q9P2N2 729 aa4.69□□□□□ -1.66
LSM6-205ENST00000507449 TMPRSS11EQ9UL52 423 aa4.69□□□□□ -1.66
LSM6-205ENST00000507449 PCDHGA9Q9Y5G4 932 aaKnown RBP4.69□□□□□ -1.66
LSM6-205ENST00000507449 PCDHGA8Q9Y5G5 932 aa4.69□□□□□ -1.66
LSM6-205ENST00000507449 PCDHGA7Q9Y5G6 932 aa4.69□□□□□ -1.66
LSM6-205ENST00000507449 PCDHGA6Q9Y5G7 932 aa4.69□□□□□ -1.66
LSM6-205ENST00000507449 PCDHGA3Q9Y5H0 932 aa4.69□□□□□ -1.66
LSM6-205ENST00000507449 PCDHGA2Q9Y5H1 932 aa4.69□□□□□ -1.66
LSM6-205ENST00000507449 TEX51A0A1B0GUA7 166 aa4.68□□□□□ -1.66
LSM6-205ENST00000507449 SHTN1A0MZ66 631 aa4.68□□□□□ -1.66
LSM6-205ENST00000507449 PRSS38A1L453 326 aa4.68□□□□□ -1.66
LSM6-205ENST00000507449 TRIM75PA6NK02 468 aa4.68□□□□□ -1.66
LSM6-205ENST00000507449 AKAP10O43572 662 aa4.68□□□□□ -1.66
LSM6-205ENST00000507449 IL18BPO95998 194 aa4.68□□□□□ -1.66
LSM6-205ENST00000507449 ENO2P09104 434 aaPredicted RBP4.68□□□□□ -1.66
LSM6-205ENST00000507449 RBP3P10745 1247 aa4.68□□□□□ -1.66
LSM6-205ENST00000507449 ITGA1P56199 1179 aa4.68□□□□□ -1.66
LSM6-205ENST00000507449 SLC6A3Q01959 620 aa4.68□□□□□ -1.66
LSM6-205ENST00000507449 ADCY1Q08828 1119 aa4.68□□□□□ -1.66
LSM6-205ENST00000507449 ADAM9Q13443 819 aa4.68□□□□□ -1.66
LSM6-205ENST00000507449 ODF1Q14990 250 aa4.68□□□□□ -1.66
LSM6-205ENST00000507449 MLANAQ16655 118 aa4.68□□□□□ -1.66
LSM6-205ENST00000507449 PTPN21Q16825 1174 aa4.68□□□□□ -1.66
LSM6-205ENST00000507449 SKIDA1Q1XH10 827 aa4.68□□□□□ -1.66
LSM6-205ENST00000507449 TTC38Q5R3I4 469 aa4.68□□□□□ -1.66
LSM6-205ENST00000507449 VASNQ6EMK4 673 aa4.68□□□□□ -1.66
LSM6-205ENST00000507449 KANSL1Q7Z3B3 1105 aa4.68□□□□□ -1.66
LSM6-205ENST00000507449 B3GNT8Q7Z7M8 397 aa4.68□□□□□ -1.66
LSM6-205ENST00000507449 STK32CQ86UX6 486 aa4.68□□□□□ -1.66
LSM6-205ENST00000507449 NME9Q86XW9 330 aa4.68□□□□□ -1.66
LSM6-205ENST00000507449 PHYKPLQ8IUZ5 450 aa4.68□□□□□ -1.66
LSM6-205ENST00000507449 LYSMD2Q8IV50 215 aa4.68□□□□□ -1.66
LSM6-205ENST00000507449 IGDCC4Q8TDY8 1250 aa4.68□□□□□ -1.66
LSM6-205ENST00000507449 TSR2Q969E8 191 aaKnown RBP4.68□□□□□ -1.66
LSM6-205ENST00000507449 CHMP4CQ96CF2 233 aa4.68□□□□□ -1.66
LSM6-205ENST00000507449 MAML3Q96JK9 1138 aa4.68□□□□□ -1.66
LSM6-205ENST00000507449 NOX5Q96PH1 765 aa4.68□□□□□ -1.66
LSM6-205ENST00000507449 TUBGCP5Q96RT8 1024 aa4.68□□□□□ -1.66
LSM6-205ENST00000507449 FOXB1Q99853 325 aa4.68□□□□□ -1.66
LSM6-205ENST00000507449 GORASP1Q9BQQ3 440 aa4.68□□□□□ -1.66
LSM6-205ENST00000507449 ANO3Q9BYT9 981 aa4.68□□□□□ -1.66
LSM6-205ENST00000507449 INCENPQ9NQS7 918 aa4.68□□□□□ -1.66
LSM6-205ENST00000507449 CCM2LQ9NUG4 571 aaPredicted RBP4.68□□□□□ -1.66
LSM6-205ENST00000507449 SIRT5Q9NXA8 310 aa4.68□□□□□ -1.66
LSM6-205ENST00000507449 USP36Q9P275 1121 aaKnown RBP4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms