RNA–Protein interactions for RNA: ENST00000507320.5

TRIM6-209, Transcript of tripartite motif containing 6, humanhuman

TSL 2 BASIC

Gene TRIM6, Length 1,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-209ENST00000507320 SMIM10L2AP0DMW4 78 aa11.9□□□□□ -0.5
TRIM6-209ENST00000507320 SMIM10L2BP0DMW5 78 aa11.9□□□□□ -0.5
TRIM6-209ENST00000507320 INSRRP14616 1297 aa11.9□□□□□ -0.5
TRIM6-209ENST00000507320 STAT6P42226 847 aa11.9□□□□□ -0.5
TRIM6-209ENST00000507320 SYKP43405 635 aa11.9□□□□□ -0.5
TRIM6-209ENST00000507320 RARRES1P49788 294 aa11.9□□□□□ -0.5
TRIM6-209ENST00000507320 LONRF3Q496Y0 759 aa11.9□□□□□ -0.5
TRIM6-209ENST00000507320 CCDC73Q6ZRK6 1079 aa11.9□□□□□ -0.5
TRIM6-209ENST00000507320 FMR1NBQ8N0W7 255 aaPredicted RBP11.9□□□□□ -0.5
TRIM6-209ENST00000507320 VTI1AQ96AJ9 217 aa11.9□□□□□ -0.5
TRIM6-209ENST00000507320 CEP89Q96ST8 783 aa11.9□□□□□ -0.5
TRIM6-209ENST00000507320 KATNAL1Q9BW62 490 aa11.9□□□□□ -0.5
TRIM6-209ENST00000507320 STARD7Q9NQZ5 370 aa11.9□□□□□ -0.5
TRIM6-209ENST00000507320 SETD4Q9NVD3 440 aa11.9□□□□□ -0.5
TRIM6-209ENST00000507320 HDAC6Q9UBN7 1215 aa11.9□□□□□ -0.5
TRIM6-209ENST00000507320 DNM3Q9UQ16 869 aa11.9□□□□□ -0.5
TRIM6-209ENST00000507320 LOXHD1Q8IVV2 1947 aa11.9□□□□□ -0.5
TRIM6-209ENST00000507320 SLC26A4O43511 780 aa11.9□□□□□ -0.51
TRIM6-209ENST00000507320 ACTN4O43707 911 aaKnown RBP11.9□□□□□ -0.51
TRIM6-209ENST00000507320 HBP1O60381 514 aa11.9□□□□□ -0.51
TRIM6-209ENST00000507320 CABYRO75952 493 aa11.9□□□□□ -0.51
TRIM6-209ENST00000507320 ZNF202O95125 648 aa11.9□□□□□ -0.51
TRIM6-209ENST00000507320 EYA4O95677 639 aa11.9□□□□□ -0.51
TRIM6-209ENST00000507320 COL6A1P12109 1028 aa11.9□□□□□ -0.51
TRIM6-209ENST00000507320 BRD2P25440 801 aaKnown RBP11.9□□□□□ -0.51
TRIM6-209ENST00000507320 SLC12A3P55017 1021 aa11.9□□□□□ -0.51
TRIM6-209ENST00000507320 IGBP1P78318 339 aa11.9□□□□□ -0.51
TRIM6-209ENST00000507320 ZNF200P98182 395 aaPredicted RBP11.9□□□□□ -0.51
TRIM6-209ENST00000507320 PPFIA1Q13136 1202 aa11.9□□□□□ -0.51
TRIM6-209ENST00000507320 ITGA7Q13683 1181 aa11.9□□□□□ -0.51
TRIM6-209ENST00000507320 DHX8Q14562 1220 aaKnown RBP11.9□□□□□ -0.51
TRIM6-209ENST00000507320 MCM6Q14566 821 aa11.9□□□□□ -0.51
TRIM6-209ENST00000507320 TARBP2Q15633 366 aaKnown RBP11.9□□□□□ -0.51
TRIM6-209ENST00000507320 MTERF2Q49AM1 385 aa11.9□□□□□ -0.51
TRIM6-209ENST00000507320 XKR9Q5GH70 373 aa11.9□□□□□ -0.51
TRIM6-209ENST00000507320 GPT2Q8TD30 523 aa11.9□□□□□ -0.51
TRIM6-209ENST00000507320 LMBR1Q8WVP7 490 aa11.9□□□□□ -0.51
TRIM6-209ENST00000507320 LARP4BQ92615 738 aaKnown RBP11.9□□□□□ -0.51
TRIM6-209ENST00000507320 RAD54LQ92698 747 aa11.9□□□□□ -0.51
TRIM6-209ENST00000507320 STAMQ92783 540 aa11.9□□□□□ -0.51
TRIM6-209ENST00000507320 PAWRQ96IZ0 340 aaKnown RBP11.9□□□□□ -0.51
TRIM6-209ENST00000507320 FAM167AQ96KS9 214 aa11.9□□□□□ -0.51
TRIM6-209ENST00000507320 MTRQ99707 1265 aa11.9□□□□□ -0.51
TRIM6-209ENST00000507320 NIFKQ9BYG3 293 aaKnown RBP11.9□□□□□ -0.51
TRIM6-209ENST00000507320 SENP6Q9GZR1 1112 aaPredicted RBP11.9□□□□□ -0.51
TRIM6-209ENST00000507320 CYP26B1Q9NR63 512 aa11.9□□□□□ -0.51
TRIM6-209ENST00000507320 NRBP2Q9NSY0 501 aa11.9□□□□□ -0.51
TRIM6-209ENST00000507320 BMP2KQ9NSY1 1161 aaPredicted RBP11.9□□□□□ -0.51
TRIM6-209ENST00000507320 SERTAD1Q9UHV2 236 aa11.9□□□□□ -0.51
TRIM6-209ENST00000507320 SSBP05455 408 aaKnown RBP eCLIP11.89□□□□□ -0.51
TRIM6-209ENST00000507320 PLA2G4BP0C869 781 aa11.89□□□□□ -0.51
TRIM6-209ENST00000507320 XRCC6P12956 609 aaKnown RBP eCLIP11.89□□□□□ -0.51
TRIM6-209ENST00000507320 FAM160A1Q05DH4 1040 aa11.89□□□□□ -0.51
TRIM6-209ENST00000507320 GRIK4Q16099 956 aa11.89□□□□□ -0.51
TRIM6-209ENST00000507320 FAM47CQ5HY64 1035 aa11.89□□□□□ -0.51
TRIM6-209ENST00000507320 MARCH8Q5T0T0 291 aa11.89□□□□□ -0.51
TRIM6-209ENST00000507320 C7orf31Q8N865 590 aa11.89□□□□□ -0.51
TRIM6-209ENST00000507320 IQUBQ8NA54 791 aa11.89□□□□□ -0.51
TRIM6-209ENST00000507320 ANKLE1Q8NAG6 615 aa11.89□□□□□ -0.51
TRIM6-209ENST00000507320 CEP170P1Q96L14 293 aa11.89□□□□□ -0.51
TRIM6-209ENST00000507320 ANKEF1Q9NU02 776 aa11.89□□□□□ -0.51
TRIM6-209ENST00000507320 DACT1Q9NYF0 836 aa11.89□□□□□ -0.51
TRIM6-209ENST00000507320 STK17AQ9UEE5 414 aa11.89□□□□□ -0.51
TRIM6-209ENST00000507320 GTF2IRD1Q9UHL9 959 aa11.89□□□□□ -0.51
TRIM6-209ENST00000507320 DBR1Q9UK59 544 aaKnown RBP11.89□□□□□ -0.51
TRIM6-209ENST00000507320 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.88□□□□□ -0.51
TRIM6-209ENST00000507320 HOXC8P31273 242 aa11.88□□□□□ -0.51
TRIM6-209ENST00000507320 ATN1P54259 1190 aaPredicted RBP11.88□□□□□ -0.51
TRIM6-209ENST00000507320 SOX10P56693 466 aa11.88□□□□□ -0.51
TRIM6-209ENST00000507320 ADAM17P78536 824 aa11.88□□□□□ -0.51
TRIM6-209ENST00000507320 GDF6Q6KF10 455 aaPredicted RBP11.88□□□□□ -0.51
TRIM6-209ENST00000507320 OTUD6AQ7L8S5 288 aa11.88□□□□□ -0.51
TRIM6-209ENST00000507320 GRAMD1CQ8IYS0 662 aa11.88□□□□□ -0.51
TRIM6-209ENST00000507320 SYT2Q8N9I0 419 aaPredicted RBP11.88□□□□□ -0.51
TRIM6-209ENST00000507320 SLC43A3Q8NBI5 491 aa11.88□□□□□ -0.51
TRIM6-209ENST00000507320 RUSC1Q9BVN2 902 aa11.88□□□□□ -0.51
TRIM6-209ENST00000507320 POLD4Q9HCU8 107 aa11.88□□□□□ -0.51
TRIM6-209ENST00000507320 NRCAMQ92823 1304 aa11.87□□□□□ -0.51
TRIM6-209ENST00000507320 A0A0U1RQG5 324 aaPredicted RBP11.87□□□□□ -0.51
TRIM6-209ENST00000507320 RBAK-RBAKDNI3L0D1 243 aa11.87□□□□□ -0.51
TRIM6-209ENST00000507320 TREHO43280 583 aa11.87□□□□□ -0.51
TRIM6-209ENST00000507320 USO1O60763 962 aaKnown RBP11.87□□□□□ -0.51
TRIM6-209ENST00000507320 CASP1P29466 404 aa11.87□□□□□ -0.51
TRIM6-209ENST00000507320 RAD51AP2Q09MP3 1159 aa11.87□□□□□ -0.51
TRIM6-209ENST00000507320 ARSHQ5FYA8 562 aa11.87□□□□□ -0.51
TRIM6-209ENST00000507320 RINT1Q6NUQ1 792 aa11.87□□□□□ -0.51
TRIM6-209ENST00000507320 NFRKBQ6P4R8 1299 aa11.87□□□□□ -0.51
TRIM6-209ENST00000507320 PADI6Q6TGC4 694 aa11.87□□□□□ -0.51
TRIM6-209ENST00000507320 KRBA2Q6ZNG9 492 aa11.87□□□□□ -0.51
TRIM6-209ENST00000507320 UBE2Q1Q7Z7E8 422 aa11.87□□□□□ -0.51
TRIM6-209ENST00000507320 TNS4Q8IZW8 715 aa11.87□□□□□ -0.51
TRIM6-209ENST00000507320 KCTD17Q8N5Z5 321 aa11.87□□□□□ -0.51
TRIM6-209ENST00000507320 CTAGE1Q96RT6 745 aa11.87□□□□□ -0.51
TRIM6-209ENST00000507320 XPNPEP1Q9NQW7 623 aa11.87□□□□□ -0.51
TRIM6-209ENST00000507320 KBTBD4Q9NVX7 518 aa11.87□□□□□ -0.51
TRIM6-209ENST00000507320 COL1A2P08123 1366 aa11.87□□□□□ -0.51
TRIM6-209ENST00000507320 NPHP3-ACAD11A0A0J9YXS1 232 aa11.87□□□□□ -0.51
TRIM6-209ENST00000507320 ARHGEF35A5YM69 484 aa11.87□□□□□ -0.51
TRIM6-209ENST00000507320 MYMKA6NI61 221 aa11.87□□□□□ -0.51
TRIM6-209ENST00000507320 ARVCFO00192 962 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms