RNA–Protein interactions for RNA: ENST00000506560.5

LIN54-206, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 2,757 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-206ENST00000506560 CENPFP49454 3210 aa13.43□□□□□ -0.26
LIN54-206ENST00000506560 CETN3O15182 167 aa13.43□□□□□ -0.26
LIN54-206ENST00000506560 YWHABP31946 246 aaKnown RBP13.43□□□□□ -0.26
LIN54-206ENST00000506560 BMT2Q1RMZ1 405 aa13.43□□□□□ -0.26
LIN54-206ENST00000506560 DCAF17Q5H9S7 520 aaPredicted RBP13.43□□□□□ -0.26
LIN54-206ENST00000506560 ZSWIM2Q8NEG5 633 aa13.43□□□□□ -0.26
LIN54-206ENST00000506560 CDCA5Q96FF9 252 aa13.43□□□□□ -0.26
LIN54-206ENST00000506560 PAGR1Q9BTK6 254 aa13.43□□□□□ -0.26
LIN54-206ENST00000506560 LACRTQ9GZZ8 138 aa13.43□□□□□ -0.26
LIN54-206ENST00000506560 TYW1Q9NV66 732 aaKnown RBP13.43□□□□□ -0.26
LIN54-206ENST00000506560 PDXKO00764 312 aa13.43□□□□□ -0.26
LIN54-206ENST00000506560 ZNF862O60290 1169 aa13.43□□□□□ -0.26
LIN54-206ENST00000506560 KCNA2P16389 499 aa13.43□□□□□ -0.26
LIN54-206ENST00000506560 TTLL12Q14166 644 aaPredicted RBP13.43□□□□□ -0.26
LIN54-206ENST00000506560 ZNF569Q5MCW4 686 aa13.43□□□□□ -0.26
LIN54-206ENST00000506560 FOXR2Q6PJQ5 311 aa13.43□□□□□ -0.26
LIN54-206ENST00000506560 INPP4AQ96PE3 977 aaPredicted RBP13.43□□□□□ -0.26
LIN54-206ENST00000506560 KIFC3Q9BVG8 833 aa13.43□□□□□ -0.26
LIN54-206ENST00000506560 MAP3K20Q9NYL2 800 aaKnown RBP13.43□□□□□ -0.26
LIN54-206ENST00000506560 CSADQ9Y600 493 aa13.43□□□□□ -0.26
LIN54-206ENST00000506560 PPP1R12BO60237 982 aaPredicted RBP13.42□□□□□ -0.26
LIN54-206ENST00000506560 SLC9A1P19634 815 aa13.42□□□□□ -0.26
LIN54-206ENST00000506560 CCND2P30279 289 aa13.42□□□□□ -0.26
LIN54-206ENST00000506560 MARSP56192 900 aaKnown RBP13.42□□□□□ -0.26
LIN54-206ENST00000506560 EAPPQ56P03 285 aaPredicted RBP13.42□□□□□ -0.26
LIN54-206ENST00000506560 SLC35F6Q8N357 371 aa13.42□□□□□ -0.26
LIN54-206ENST00000506560 NSUN6Q8TEA1 469 aaKnown RBP13.42□□□□□ -0.26
LIN54-206ENST00000506560 NUP58Q9BVL2 599 aa13.42□□□□□ -0.26
LIN54-206ENST00000506560 HOXC10Q9NYD6 342 aa13.42□□□□□ -0.26
LIN54-206ENST00000506560 GUCA1BQ9UMX6 200 aa13.42□□□□□ -0.26
LIN54-206ENST00000506560 TLR2O60603 784 aa13.42□□□□□ -0.26
LIN54-206ENST00000506560 FDX1P10109 184 aa13.42□□□□□ -0.26
LIN54-206ENST00000506560 CASQ1P31415 396 aa13.42□□□□□ -0.26
LIN54-206ENST00000506560 OAZ1P54368 228 aa13.42□□□□□ -0.26
LIN54-206ENST00000506560 POLR2FP61218 127 aaKnown RBP13.42□□□□□ -0.26
LIN54-206ENST00000506560 ELF2Q15723 593 aa13.42□□□□□ -0.26
LIN54-206ENST00000506560 ENOX2Q16206 610 aaKnown RBP13.42□□□□□ -0.26
LIN54-206ENST00000506560 ARHGAP29Q52LW3 1261 aa13.42□□□□□ -0.26
LIN54-206ENST00000506560 TCERG1LQ5VWI1 586 aa13.42□□□□□ -0.26
LIN54-206ENST00000506560 LBX2Q6XYB7 198 aa13.42□□□□□ -0.26
LIN54-206ENST00000506560 ANO5Q75V66 913 aa13.42□□□□□ -0.26
LIN54-206ENST00000506560 RDH13Q8NBN7 331 aa13.42□□□□□ -0.26
LIN54-206ENST00000506560 RETREG2Q8NC44 543 aa13.42□□□□□ -0.26
LIN54-206ENST00000506560 TXNRD2Q9NNW7 524 aa13.42□□□□□ -0.26
LIN54-206ENST00000506560 TBC1D22BQ9NU19 505 aa13.42□□□□□ -0.26
LIN54-206ENST00000506560 ATP2A1O14983 1001 aa13.41□□□□□ -0.26
LIN54-206ENST00000506560 GAP43P17677 238 aa13.41□□□□□ -0.26
LIN54-206ENST00000506560 GUCY2CP25092 1073 aa13.41□□□□□ -0.26
LIN54-206ENST00000506560 CYP2J2P51589 502 aa13.41□□□□□ -0.26
LIN54-206ENST00000506560 FIGNQ5HY92 759 aa13.41□□□□□ -0.26
LIN54-206ENST00000506560 EEPD1Q7L9B9 569 aa13.41□□□□□ -0.26
LIN54-206ENST00000506560 CARD6Q9BX69 1037 aa13.41□□□□□ -0.26
LIN54-206ENST00000506560 EPC1Q9H2F5 836 aa13.41□□□□□ -0.26
LIN54-206ENST00000506560 ARMCX3Q9UH62 379 aaPredicted RBP13.41□□□□□ -0.26
LIN54-206ENST00000506560 AJAP1Q9UKB5 411 aaPredicted RBP13.41□□□□□ -0.26
LIN54-206ENST00000506560 PLAGL2Q9UPG8 496 aa13.41□□□□□ -0.26
LIN54-206ENST00000506560 A0A1W2PQJ5 194 aa13.41□□□□□ -0.26
LIN54-206ENST00000506560 K7ENM7 598 aa13.41□□□□□ -0.26
LIN54-206ENST00000506560 KIF20AO95235 890 aa13.41□□□□□ -0.26
LIN54-206ENST00000506560 SLU7O95391 586 aaKnown RBP13.41□□□□□ -0.26
LIN54-206ENST00000506560 EPHX2P34913 555 aa13.41□□□□□ -0.26
LIN54-206ENST00000506560 ARID5AQ03989 594 aa13.41□□□□□ -0.26
LIN54-206ENST00000506560 ERCC6LQ2NKX8 1250 aa13.41□□□□□ -0.26
LIN54-206ENST00000506560 DPY19L2P1Q6NXN4 242 aa13.41□□□□□ -0.26
LIN54-206ENST00000506560 GJB7Q6PEY0 223 aa13.41□□□□□ -0.26
LIN54-206ENST00000506560 PPP4R3CPQ6ZMV5 832 aa13.41□□□□□ -0.26
LIN54-206ENST00000506560 CCDC60Q8IWA6 550 aaPredicted RBP13.41□□□□□ -0.26
LIN54-206ENST00000506560 NEK11Q8NG66 645 aa13.41□□□□□ -0.26
LIN54-206ENST00000506560 PKNOX2Q96KN3 472 aa13.41□□□□□ -0.26
LIN54-206ENST00000506560 GABBR1Q9UBS5 961 aa13.41□□□□□ -0.26
LIN54-206ENST00000506560 CALUO43852 315 aaPredicted RBP13.4□□□□□ -0.26
LIN54-206ENST00000506560 PPP1R37O75864 691 aa13.4□□□□□ -0.26
LIN54-206ENST00000506560 EIF4A3P38919 411 aaKnown RBP13.4□□□□□ -0.26
LIN54-206ENST00000506560 TSR1Q2NL82 804 aaKnown RBP13.4□□□□□ -0.26
LIN54-206ENST00000506560 XKR9Q5GH70 373 aa13.4□□□□□ -0.26
LIN54-206ENST00000506560 NLRX1Q86UT6 975 aa13.4□□□□□ -0.26
LIN54-206ENST00000506560 ANKRD35Q8N283 1001 aa13.4□□□□□ -0.26
LIN54-206ENST00000506560 SLC35C1Q96A29 364 aa13.4□□□□□ -0.26
LIN54-206ENST00000506560 PCIF1Q9H4Z3 704 aa13.4□□□□□ -0.26
LIN54-206ENST00000506560 GOLGA6L9A6NEM1 432 aa13.4□□□□□ -0.26
LIN54-206ENST00000506560 WDR64B1ANS9 1081 aa13.4□□□□□ -0.26
LIN54-206ENST00000506560 TRIM49P0CI25 452 aa13.4□□□□□ -0.26
LIN54-206ENST00000506560 TRIM49CP0CI26 452 aa13.4□□□□□ -0.26
LIN54-206ENST00000506560 PNMA6AP0CW24 399 aaPredicted RBP13.4□□□□□ -0.26
LIN54-206ENST00000506560 MUTP22033 750 aa13.4□□□□□ -0.26
LIN54-206ENST00000506560 Q3C1V9 767 aa13.4□□□□□ -0.26
LIN54-206ENST00000506560 SWSAP1Q6NVH7 229 aa13.4□□□□□ -0.26
LIN54-206ENST00000506560 PDXDC1Q6P996 788 aa13.4□□□□□ -0.26
LIN54-206ENST00000506560 SEPT14Q6ZU15 432 aa13.4□□□□□ -0.26
LIN54-206ENST00000506560 NCAPG2Q86XI2 1143 aa13.4□□□□□ -0.26
LIN54-206ENST00000506560 RBM46Q8TBY0 533 aaKnown RBP13.4□□□□□ -0.26
LIN54-206ENST00000506560 NEK9Q8TD19 979 aa13.4□□□□□ -0.26
LIN54-206ENST00000506560 STRA6Q9BX79 667 aa13.4□□□□□ -0.26
LIN54-206ENST00000506560 MOV10L1Q9BXT6 1211 aaKnown RBP13.4□□□□□ -0.26
LIN54-206ENST00000506560 ASCC2Q9H1I8 757 aaPredicted RBP13.4□□□□□ -0.26
LIN54-206ENST00000506560 AGPAT3Q9NRZ7 376 aa13.4□□□□□ -0.26
LIN54-206ENST00000506560 ODF2LQ9ULJ1 636 aa13.4□□□□□ -0.26
LIN54-206ENST00000506560 FAM170AA1A519 330 aa13.39□□□□□ -0.27
LIN54-206ENST00000506560 EIF3DO15371 548 aaKnown RBP eCLIP13.39□□□□□ -0.27
LIN54-206ENST00000506560 SLC16A4O15374 487 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms