RNA–Protein interactions for RNA: ENST00000505982.1

CHD1-204, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 758 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-204ENST00000505982 FBLN5Q9UBX5 448 aa7.88□□□□□ -1.15
CHD1-204ENST00000505982 NOC2LQ9Y3T9 749 aaKnown RBP7.88□□□□□ -1.15
CHD1-204ENST00000505982 SLC27A2O14975 620 aa7.87□□□□□ -1.15
CHD1-204ENST00000505982 SRGAP3O43295 1099 aa7.87□□□□□ -1.15
CHD1-204ENST00000505982 CT47B1P0C2W7 299 aaPredicted RBP7.87□□□□□ -1.15
CHD1-204ENST00000505982 KLF1Q13351 362 aaPredicted RBP7.87□□□□□ -1.15
CHD1-204ENST00000505982 TMEM132BQ14DG7 1078 aa7.87□□□□□ -1.15
CHD1-204ENST00000505982 VWA3BQ502W6 1294 aa7.87□□□□□ -1.15
CHD1-204ENST00000505982 NT5DC1Q5TFE4 455 aa7.87□□□□□ -1.15
CHD1-204ENST00000505982 FSTL4Q6MZW2 842 aa7.87□□□□□ -1.15
CHD1-204ENST00000505982 UHMK1Q8TAS1 419 aaKnown RBP7.87□□□□□ -1.15
CHD1-204ENST00000505982 FNIP1Q8TF40 1166 aa7.87□□□□□ -1.15
CHD1-204ENST00000505982 AP5M1Q9H0R1 490 aa7.87□□□□□ -1.15
CHD1-204ENST00000505982 ACSS2Q9NR19 701 aa7.87□□□□□ -1.15
CHD1-204ENST00000505982 ZNF180Q9UJW8 692 aa7.87□□□□□ -1.15
CHD1-204ENST00000505982 ZNF652Q9Y2D9 606 aa7.87□□□□□ -1.15
CHD1-204ENST00000505982 PMF1-BGLAPU3KQ54 211 aa7.87□□□□□ -1.15
CHD1-204ENST00000505982 HGSO14964 777 aaPredicted RBP7.86□□□□□ -1.15
CHD1-204ENST00000505982 CLASP2O75122 1294 aaKnown RBP7.86□□□□□ -1.15
CHD1-204ENST00000505982 DBHP09172 617 aa7.86□□□□□ -1.15
CHD1-204ENST00000505982 SCAND1P57086 179 aa7.86□□□□□ -1.15
CHD1-204ENST00000505982 ERVK-21P61565 698 aa7.86□□□□□ -1.15
CHD1-204ENST00000505982 TERF2Q15554 542 aa7.86□□□□□ -1.15
CHD1-204ENST00000505982 ZNF827Q17R98 1081 aa7.86□□□□□ -1.15
CHD1-204ENST00000505982 PGM2L1Q6PCE3 622 aa7.86□□□□□ -1.15
CHD1-204ENST00000505982 LIPIQ6XZB0 460 aa7.86□□□□□ -1.15
CHD1-204ENST00000505982 KCTD1Q719H9 257 aa7.86□□□□□ -1.15
CHD1-204ENST00000505982 PNMA8AQ86V59 439 aaPredicted RBP7.86□□□□□ -1.15
CHD1-204ENST00000505982 DCP2Q8IU60 420 aaKnown RBP7.86□□□□□ -1.15
CHD1-204ENST00000505982 C8orf48Q96LL4 319 aa7.86□□□□□ -1.15
CHD1-204ENST00000505982 RIC8BQ9NVN3 520 aa7.86□□□□□ -1.15
CHD1-204ENST00000505982 GABBR1Q9UBS5 961 aa7.86□□□□□ -1.15
CHD1-204ENST00000505982 LUC7L2Q9Y383 392 aaKnown RBP7.86□□□□□ -1.15
CHD1-204ENST00000505982 K7ESF4 209 aa7.85□□□□□ -1.15
CHD1-204ENST00000505982 DVL2O14641 736 aa7.85□□□□□ -1.15
CHD1-204ENST00000505982 PRC1O43663 620 aa7.85□□□□□ -1.15
CHD1-204ENST00000505982 SNUPNO95149 360 aaKnown RBP7.85□□□□□ -1.15
CHD1-204ENST00000505982 ATF3P18847 181 aa7.85□□□□□ -1.15
CHD1-204ENST00000505982 RASSF3Q86WH2 238 aa7.85□□□□□ -1.15
CHD1-204ENST00000505982 RBM12BQ8IXT5 1001 aaKnown RBP7.85□□□□□ -1.15
CHD1-204ENST00000505982 MYO1HQ8N1T3 1032 aa7.85□□□□□ -1.15
CHD1-204ENST00000505982 FUBP3Q96I24 572 aaKnown RBP eCLIP7.85□□□□□ -1.15
CHD1-204ENST00000505982 SPATA25Q9BR10 227 aa7.85□□□□□ -1.15
CHD1-204ENST00000505982 RNF38Q9H0F5 515 aa7.85□□□□□ -1.15
CHD1-204ENST00000505982 CDH19Q9H159 772 aa7.85□□□□□ -1.15
CHD1-204ENST00000505982 SMOC1Q9H4F8 434 aa7.85□□□□□ -1.15
CHD1-204ENST00000505982 KCNH7Q9NS40 1196 aa7.85□□□□□ -1.15
CHD1-204ENST00000505982 GEMIN8Q9NWZ8 242 aaKnown RBP7.85□□□□□ -1.15
CHD1-204ENST00000505982 MYOTQ9UBF9 498 aa7.85□□□□□ -1.15
CHD1-204ENST00000505982 IP6K2Q9UHH9 426 aa7.85□□□□□ -1.15
CHD1-204ENST00000505982 NOB1Q9ULX3 412 aaKnown RBP7.85□□□□□ -1.15
CHD1-204ENST00000505982 PCDHB4Q9Y5E5 795 aa7.85□□□□□ -1.15
CHD1-204ENST00000505982 PRAMEF25A6NGN4 478 aa7.84□□□□□ -1.15
CHD1-204ENST00000505982 GOLGA8AA7E2F4 631 aa7.84□□□□□ -1.15
CHD1-204ENST00000505982 GOLGA8BA8MQT2 603 aa7.84□□□□□ -1.15
CHD1-204ENST00000505982 CFBP00751 764 aa7.84□□□□□ -1.15
CHD1-204ENST00000505982 PLA2G1BP04054 148 aaKnown RBP7.84□□□□□ -1.15
CHD1-204ENST00000505982 CYP17A1P05093 508 aa7.84□□□□□ -1.15
CHD1-204ENST00000505982 FBLN1P23142 703 aa7.84□□□□□ -1.15
CHD1-204ENST00000505982 SLC6A11P48066 632 aa7.84□□□□□ -1.15
CHD1-204ENST00000505982 TBX4P57082 545 aa7.84□□□□□ -1.15
CHD1-204ENST00000505982 PHC1P78364 1004 aa7.84□□□□□ -1.15
CHD1-204ENST00000505982 SMAD3P84022 425 aaKnown RBP7.84□□□□□ -1.15
CHD1-204ENST00000505982 SMAD2Q15796 467 aaKnown RBP7.84□□□□□ -1.15
CHD1-204ENST00000505982 EMC4Q5J8M3 183 aa7.84□□□□□ -1.15
CHD1-204ENST00000505982 BTBD8Q5XKL5 378 aa7.84□□□□□ -1.15
CHD1-204ENST00000505982 CYP4F22Q6NT55 531 aa7.84□□□□□ -1.15
CHD1-204ENST00000505982 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.84□□□□□ -1.15
CHD1-204ENST00000505982 SAPCD2Q86UD0 394 aa7.84□□□□□ -1.15
CHD1-204ENST00000505982 AMOTL1Q8IY63 956 aa7.84□□□□□ -1.15
CHD1-204ENST00000505982 ZZZ3Q8IYH5 903 aa7.84□□□□□ -1.15
CHD1-204ENST00000505982 ADGRG2Q8IZP9 1017 aa7.84□□□□□ -1.15
CHD1-204ENST00000505982 CBARPQ8N350 705 aaPredicted RBP7.84□□□□□ -1.15
CHD1-204ENST00000505982 ZNF610Q8N9Z0 462 aa7.84□□□□□ -1.15
CHD1-204ENST00000505982 SEC14L1Q92503 715 aa7.84□□□□□ -1.15
CHD1-204ENST00000505982 MKS1Q9NXB0 559 aa7.84□□□□□ -1.15
CHD1-204ENST00000505982 DBR1Q9UK59 544 aaKnown RBP7.84□□□□□ -1.15
CHD1-204ENST00000505982 NUDT5Q9UKK9 219 aa7.84□□□□□ -1.15
CHD1-204ENST00000505982 B3GALT1Q9Y5Z6 326 aa7.84□□□□□ -1.15
CHD1-204ENST00000505982 A0A1B0GTL3 188 aa7.83□□□□□ -1.16
CHD1-204ENST00000505982 SH3D21A4FU49 640 aa7.83□□□□□ -1.16
CHD1-204ENST00000505982 F8W031 263 aaPredicted RBP7.83□□□□□ -1.16
CHD1-204ENST00000505982 KDM1AO60341 852 aa7.83□□□□□ -1.16
CHD1-204ENST00000505982 LTFP02788 710 aa7.83□□□□□ -1.16
CHD1-204ENST00000505982 NCAM1P13591 858 aa7.83□□□□□ -1.16
CHD1-204ENST00000505982 ATF2P15336 505 aa7.83□□□□□ -1.16
CHD1-204ENST00000505982 ZSCAN20P17040 1043 aaPredicted RBP7.83□□□□□ -1.16
CHD1-204ENST00000505982 CD40P25942 277 aa7.83□□□□□ -1.16
CHD1-204ENST00000505982 PTX3P26022 381 aaPredicted RBP7.83□□□□□ -1.16
CHD1-204ENST00000505982 GJA4P35212 333 aa7.83□□□□□ -1.16
CHD1-204ENST00000505982 TUSC3Q13454 348 aa7.83□□□□□ -1.16
CHD1-204ENST00000505982 CLUL1Q15846 466 aa7.83□□□□□ -1.16
CHD1-204ENST00000505982 CC2D1AQ6P1N0 951 aaPredicted RBP7.83□□□□□ -1.16
CHD1-204ENST00000505982 CCDC146Q8IYE0 955 aa7.83□□□□□ -1.16
CHD1-204ENST00000505982 NETO2Q8NC67 525 aa7.83□□□□□ -1.16
CHD1-204ENST00000505982 PHOSPHO1Q8TCT1 267 aa7.83□□□□□ -1.16
CHD1-204ENST00000505982 RTFDC1Q9BY42 306 aaPredicted RBP7.83□□□□□ -1.16
CHD1-204ENST00000505982 MS4A5Q9H3V2 200 aa7.83□□□□□ -1.16
CHD1-204ENST00000505982 RXFP1Q9HBX9 757 aa7.83□□□□□ -1.16
CHD1-204ENST00000505982 TOPORSQ9NS56 1045 aaPredicted RBP7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms