RNA–Protein interactions for RNA: ENST00000505553.5

TRAPPC13-208, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,410 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-208ENST00000505553 RNF111Q6ZNA4 994 aa4.92□□□□□ -1.62
TRAPPC13-208ENST00000505553 APBB1IPQ7Z5R6 666 aaPredicted RBP4.92□□□□□ -1.62
TRAPPC13-208ENST00000505553 ZZZ3Q8IYH5 903 aa4.92□□□□□ -1.62
TRAPPC13-208ENST00000505553 USHBP1Q8N6Y0 703 aa4.92□□□□□ -1.62
TRAPPC13-208ENST00000505553 ZNF610Q8N9Z0 462 aa4.92□□□□□ -1.62
TRAPPC13-208ENST00000505553 SSH1Q8WYL5 1049 aa4.92□□□□□ -1.62
TRAPPC13-208ENST00000505553 TIFAQ96CG3 184 aa4.92□□□□□ -1.62
TRAPPC13-208ENST00000505553 PCIF1Q9H4Z3 704 aa4.92□□□□□ -1.62
TRAPPC13-208ENST00000505553 CLDND1Q9NY35 253 aa4.92□□□□□ -1.62
TRAPPC13-208ENST00000505553 MBD1Q9UIS9 605 aaPredicted RBP4.92□□□□□ -1.62
TRAPPC13-208ENST00000505553 TCFL5Q9UL49 500 aa4.92□□□□□ -1.62
TRAPPC13-208ENST00000505553 ZNF561-AS1K7EIQ3 104 aa4.91□□□□□ -1.62
TRAPPC13-208ENST00000505553 N4BP3O15049 544 aa4.91□□□□□ -1.62
TRAPPC13-208ENST00000505553 HIP1RO75146 1068 aa4.91□□□□□ -1.62
TRAPPC13-208ENST00000505553 GNAT1P11488 350 aa4.91□□□□□ -1.62
TRAPPC13-208ENST00000505553 TNFRSF1AP19438 455 aa4.91□□□□□ -1.62
TRAPPC13-208ENST00000505553 RPL10P27635 214 aaKnown RBP4.91□□□□□ -1.62
TRAPPC13-208ENST00000505553 HTR3AP46098 478 aa4.91□□□□□ -1.62
TRAPPC13-208ENST00000505553 SMAD3P84022 425 aaKnown RBP4.91□□□□□ -1.62
TRAPPC13-208ENST00000505553 IRF9Q00978 393 aa4.91□□□□□ -1.62
TRAPPC13-208ENST00000505553 LAPTM5Q13571 262 aa4.91□□□□□ -1.62
TRAPPC13-208ENST00000505553 ODF1Q14990 250 aa4.91□□□□□ -1.62
TRAPPC13-208ENST00000505553 RALBP1Q15311 655 aa4.91□□□□□ -1.62
TRAPPC13-208ENST00000505553 SMAD2Q15796 467 aaKnown RBP4.91□□□□□ -1.62
TRAPPC13-208ENST00000505553 CLUL1Q15846 466 aa4.91□□□□□ -1.62
TRAPPC13-208ENST00000505553 SLC14A2Q15849 920 aa4.91□□□□□ -1.62
TRAPPC13-208ENST00000505553 VMACQ2NL98 169 aa4.91□□□□□ -1.62
TRAPPC13-208ENST00000505553 C10orf62Q5T681 223 aaPredicted RBP4.91□□□□□ -1.62
TRAPPC13-208ENST00000505553 IL31Q6EBC2 164 aa4.91□□□□□ -1.62
TRAPPC13-208ENST00000505553 FRMD7Q6ZUT3 714 aa4.91□□□□□ -1.62
TRAPPC13-208ENST00000505553 OSTM1Q86WC4 334 aa4.91□□□□□ -1.62
TRAPPC13-208ENST00000505553 CPNE8Q86YQ8 564 aa4.91□□□□□ -1.62
TRAPPC13-208ENST00000505553 KIAA1958Q8N8K9 716 aa4.91□□□□□ -1.62
TRAPPC13-208ENST00000505553 NAT16Q8N8M0 369 aa4.91□□□□□ -1.62
TRAPPC13-208ENST00000505553 SLC16A11Q8NCK7 471 aa4.91□□□□□ -1.62
TRAPPC13-208ENST00000505553 LMBR1Q8WVP7 490 aa4.91□□□□□ -1.62
TRAPPC13-208ENST00000505553 TMEM169Q96HH4 297 aa4.91□□□□□ -1.62
TRAPPC13-208ENST00000505553 LRGUKQ96M69 825 aa4.91□□□□□ -1.62
TRAPPC13-208ENST00000505553 ACAP3Q96P50 834 aa4.91□□□□□ -1.62
TRAPPC13-208ENST00000505553 SORCS2Q96PQ0 1159 aa4.91□□□□□ -1.62
TRAPPC13-208ENST00000505553 KCNJ15Q99712 375 aa4.91□□□□□ -1.62
TRAPPC13-208ENST00000505553 CDADC1Q9BWV3 514 aa4.91□□□□□ -1.62
TRAPPC13-208ENST00000505553 PRDM16Q9HAZ2 1276 aa4.91□□□□□ -1.62
TRAPPC13-208ENST00000505553 ACSS2Q9NR19 701 aa4.91□□□□□ -1.62
TRAPPC13-208ENST00000505553 TOMM22Q9NS69 142 aa4.91□□□□□ -1.62
TRAPPC13-208ENST00000505553 AP5S1Q9NUS5 200 aa4.91□□□□□ -1.62
TRAPPC13-208ENST00000505553 SAP30BPQ9UHR5 308 aaKnown RBP4.91□□□□□ -1.62
TRAPPC13-208ENST00000505553 SH3BP5O60239 455 aa4.9□□□□□ -1.62
TRAPPC13-208ENST00000505553 PCDHGA12O60330 932 aa4.9□□□□□ -1.62
TRAPPC13-208ENST00000505553 CYP17A1P05093 508 aa4.9□□□□□ -1.62
TRAPPC13-208ENST00000505553 ASGR2P07307 311 aa4.9□□□□□ -1.62
TRAPPC13-208ENST00000505553 ZBTB48P10074 688 aaPredicted RBP4.9□□□□□ -1.62
TRAPPC13-208ENST00000505553 SLC9A1P19634 815 aa4.9□□□□□ -1.62
TRAPPC13-208ENST00000505553 BCL6P41182 706 aa4.9□□□□□ -1.62
TRAPPC13-208ENST00000505553 NEK3P51956 506 aa4.9□□□□□ -1.62
TRAPPC13-208ENST00000505553 HMGA2P52926 109 aa4.9□□□□□ -1.62
TRAPPC13-208ENST00000505553 GRM3Q14832 879 aa4.9□□□□□ -1.62
TRAPPC13-208ENST00000505553 RTP5Q14D33 572 aa4.9□□□□□ -1.62
TRAPPC13-208ENST00000505553 ACAP2Q15057 778 aa4.9□□□□□ -1.62
TRAPPC13-208ENST00000505553 RRP12Q5JTH9 1297 aaKnown RBP4.9□□□□□ -1.62
TRAPPC13-208ENST00000505553 IFIT1BQ5T764 474 aaKnown RBP4.9□□□□□ -1.62
TRAPPC13-208ENST00000505553 OLFML2BQ68BL8 750 aa4.9□□□□□ -1.62
TRAPPC13-208ENST00000505553 CNKSR3Q6P9H4 555 aa4.9□□□□□ -1.62
TRAPPC13-208ENST00000505553 TMED8Q6PL24 325 aaPredicted RBP4.9□□□□□ -1.62
TRAPPC13-208ENST00000505553 TTLL7Q6ZT98 887 aa4.9□□□□□ -1.62
TRAPPC13-208ENST00000505553 SPICE1Q8N0Z3 855 aa4.9□□□□□ -1.62
TRAPPC13-208ENST00000505553 LINC01356Q8N9X3 169 aa4.9□□□□□ -1.62
TRAPPC13-208ENST00000505553 LINC01599Q8WXQ3 324 aa4.9□□□□□ -1.62
TRAPPC13-208ENST00000505553 E2F7Q96AV8 911 aa4.9□□□□□ -1.62
TRAPPC13-208ENST00000505553 STRBPQ96SI9 672 aaKnown RBP4.9□□□□□ -1.62
TRAPPC13-208ENST00000505553 ELF4Q99607 663 aaPredicted RBP4.9□□□□□ -1.62
TRAPPC13-208ENST00000505553 FOXP3Q9BZS1 431 aa4.9□□□□□ -1.62
TRAPPC13-208ENST00000505553 ZDHHC5Q9C0B5 715 aa4.9□□□□□ -1.62
TRAPPC13-208ENST00000505553 CSRNP2Q9H175 543 aa4.9□□□□□ -1.62
TRAPPC13-208ENST00000505553 ANLNQ9NQW6 1124 aa4.9□□□□□ -1.62
TRAPPC13-208ENST00000505553 TOPORSQ9NS56 1045 aaPredicted RBP4.9□□□□□ -1.62
TRAPPC13-208ENST00000505553 PPARGC1AQ9UBK2 798 aaKnown RBP4.9□□□□□ -1.62
TRAPPC13-208ENST00000505553 KCNG1Q9UIX4 513 aa4.9□□□□□ -1.62
TRAPPC13-208ENST00000505553 INTUQ9ULD6 942 aa4.9□□□□□ -1.62
TRAPPC13-208ENST00000505553 PCDHGA9Q9Y5G4 932 aaKnown RBP4.9□□□□□ -1.62
TRAPPC13-208ENST00000505553 PCDHGA8Q9Y5G5 932 aa4.9□□□□□ -1.62
TRAPPC13-208ENST00000505553 PCDHGA7Q9Y5G6 932 aa4.9□□□□□ -1.62
TRAPPC13-208ENST00000505553 PCDHGA6Q9Y5G7 932 aa4.9□□□□□ -1.62
TRAPPC13-208ENST00000505553 PCDHGA3Q9Y5H0 932 aa4.9□□□□□ -1.62
TRAPPC13-208ENST00000505553 PCDHGA2Q9Y5H1 932 aa4.9□□□□□ -1.62
TRAPPC13-208ENST00000505553 C7orf72A4D263 438 aa4.89□□□□□ -1.63
TRAPPC13-208ENST00000505553 CTNND1O60716 968 aaKnown RBP4.89□□□□□ -1.63
TRAPPC13-208ENST00000505553 OFD1O75665 1012 aa4.89□□□□□ -1.63
TRAPPC13-208ENST00000505553 FSHBP01225 129 aa4.89□□□□□ -1.63
TRAPPC13-208ENST00000505553 KRT15P19012 456 aa4.89□□□□□ -1.63
TRAPPC13-208ENST00000505553 PAX3P23760 479 aa4.89□□□□□ -1.63
TRAPPC13-208ENST00000505553 CD40P25942 277 aa4.89□□□□□ -1.63
TRAPPC13-208ENST00000505553 GPR3P46089 330 aa4.89□□□□□ -1.63
TRAPPC13-208ENST00000505553 KIF11P52732 1056 aa4.89□□□□□ -1.63
TRAPPC13-208ENST00000505553 JAM2P57087 298 aa4.89□□□□□ -1.63
TRAPPC13-208ENST00000505553 GRAMD1BQ3KR37 738 aa4.89□□□□□ -1.63
TRAPPC13-208ENST00000505553 ARHGAP36Q6ZRI8 547 aa4.89□□□□□ -1.63
TRAPPC13-208ENST00000505553 WAPLQ7Z5K2 1190 aa4.89□□□□□ -1.63
TRAPPC13-208ENST00000505553 SIRT2Q8IXJ6 389 aa4.89□□□□□ -1.63
TRAPPC13-208ENST00000505553 NLGN4XQ8N0W4 816 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms