RNA–Protein interactions for RNA: ENST00000504430.5

NIPBL-204, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 3,455 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-204ENST00000504430 ARNTLO00327 626 aa5.93□□□□□ -1.46
NIPBL-204ENST00000504430 USO1O60763 962 aaKnown RBP5.93□□□□□ -1.46
NIPBL-204ENST00000504430 LCP1P13796 627 aa5.93□□□□□ -1.46
NIPBL-204ENST00000504430 PTX3P26022 381 aaPredicted RBP5.93□□□□□ -1.46
NIPBL-204ENST00000504430 PPARDQ03181 441 aa5.93□□□□□ -1.46
NIPBL-204ENST00000504430 PLAURQ03405 335 aa5.93□□□□□ -1.46
NIPBL-204ENST00000504430 BECN1Q14457 450 aa5.93□□□□□ -1.46
NIPBL-204ENST00000504430 MBTPS1Q14703 1052 aa5.93□□□□□ -1.46
NIPBL-204ENST00000504430 CEP68Q76N32 757 aa5.93□□□□□ -1.46
NIPBL-204ENST00000504430 IPMKQ8NFU5 416 aa5.93□□□□□ -1.46
NIPBL-204ENST00000504430 YTHDC1Q96MU7 727 aaKnown RBP5.93□□□□□ -1.46
NIPBL-204ENST00000504430 CCDC86Q9H6F5 360 aaKnown RBP5.93□□□□□ -1.46
NIPBL-204ENST00000504430 TIMMDC1Q9NPL8 285 aa5.93□□□□□ -1.46
NIPBL-204ENST00000504430 TMEFF2Q9UIK5 374 aaPredicted RBP5.93□□□□□ -1.46
NIPBL-204ENST00000504430 SNX13Q9Y5W8 968 aa5.93□□□□□ -1.46
NIPBL-204ENST00000504430 DKC1O60832 514 aaKnown RBP eCLIP5.93□□□□□ -1.46
NIPBL-204ENST00000504430 UBXN7O94888 489 aa5.93□□□□□ -1.46
NIPBL-204ENST00000504430 ADRB2P07550 413 aa5.93□□□□□ -1.46
NIPBL-204ENST00000504430 ESRRAP11474 423 aaPredicted RBP5.93□□□□□ -1.46
NIPBL-204ENST00000504430 HNRNPLP14866 589 aaKnown RBP eCLIP5.93□□□□□ -1.46
NIPBL-204ENST00000504430 YBX3P16989 372 aaKnown RBP eCLIP5.93□□□□□ -1.465e-7■■■□□ 16.3
NIPBL-204ENST00000504430 EIF2AK2P19525 551 aaKnown RBP5.93□□□□□ -1.46
NIPBL-204ENST00000504430 RPS6KB1P23443 525 aa5.93□□□□□ -1.46
NIPBL-204ENST00000504430 ITGA8P53708 1063 aa5.93□□□□□ -1.46
NIPBL-204ENST00000504430 SMC1AQ14683 1233 aaKnown RBP5.93□□□□□ -1.46
NIPBL-204ENST00000504430 IRGCQ6NXR0 463 aa5.93□□□□□ -1.46
NIPBL-204ENST00000504430 CCDC73Q6ZRK6 1079 aa5.93□□□□□ -1.46
NIPBL-204ENST00000504430 DDX53Q86TM3 631 aaKnown RBP5.93□□□□□ -1.46
NIPBL-204ENST00000504430 KCTD10Q9H3F6 313 aa5.93□□□□□ -1.46
NIPBL-204ENST00000504430 C14orf93Q9H972 538 aaKnown RBP5.93□□□□□ -1.46
NIPBL-204ENST00000504430 LRFN1Q9P244 771 aa5.93□□□□□ -1.46
NIPBL-204ENST00000504430 KCNH4Q9UQ05 1017 aa5.93□□□□□ -1.46
NIPBL-204ENST00000504430 TMEM110-MUSTN1A8MSY1 372 aa5.92□□□□□ -1.46
NIPBL-204ENST00000504430 RHPN2P1A8MT19 583 aa5.92□□□□□ -1.46
NIPBL-204ENST00000504430 NOP56O00567 594 aaKnown RBP5.92□□□□□ -1.46
NIPBL-204ENST00000504430 EFCAB14O75071 495 aa5.92□□□□□ -1.46
NIPBL-204ENST00000504430 APOA4P06727 396 aa5.92□□□□□ -1.46
NIPBL-204ENST00000504430 TIMP2P16035 220 aa5.92□□□□□ -1.46
NIPBL-204ENST00000504430 IFIT5Q13325 482 aaKnown RBP5.92□□□□□ -1.46
NIPBL-204ENST00000504430 TMEM177Q53S58 311 aa5.92□□□□□ -1.46
NIPBL-204ENST00000504430 RTKN2Q8IZC4 609 aa5.92□□□□□ -1.46
NIPBL-204ENST00000504430 USP13Q92995 863 aaPredicted RBP5.92□□□□□ -1.46
NIPBL-204ENST00000504430 ZDHHC15Q96MV8 337 aa5.92□□□□□ -1.46
NIPBL-204ENST00000504430 EPB41L4AQ9HCS5 686 aaPredicted RBP5.92□□□□□ -1.46
NIPBL-204ENST00000504430 DNAJC28Q9NX36 388 aa5.92□□□□□ -1.46
NIPBL-204ENST00000504430 POM121BA6NF01 834 aa5.92□□□□□ -1.46
NIPBL-204ENST00000504430 F8W8V4 182 aa5.92□□□□□ -1.46
NIPBL-204ENST00000504430 J3QL48 77 aa5.92□□□□□ -1.46
NIPBL-204ENST00000504430 MEIS1O00470 390 aa5.92□□□□□ -1.46
NIPBL-204ENST00000504430 GUCA1CO95843 209 aa5.92□□□□□ -1.46
NIPBL-204ENST00000504430 THBS1P07996 1170 aa5.92□□□□□ -1.46
NIPBL-204ENST00000504430 ATP6V1B1P15313 513 aa5.92□□□□□ -1.46
NIPBL-204ENST00000504430 EPHA1P21709 976 aa5.92□□□□□ -1.46
NIPBL-204ENST00000504430 ITGA6P23229 1130 aa5.92□□□□□ -1.46
NIPBL-204ENST00000504430 YBEYP58557 167 aaPredicted RBP5.92□□□□□ -1.46
NIPBL-204ENST00000504430 CDC16Q13042 620 aa5.92□□□□□ -1.46
NIPBL-204ENST00000504430 DCTN1Q14203 1278 aa5.92□□□□□ -1.46
NIPBL-204ENST00000504430 CNN3Q15417 329 aaKnown RBP5.92□□□□□ -1.46
NIPBL-204ENST00000504430 LIAT1Q6ZQX7 453 aa5.92□□□□□ -1.46
NIPBL-204ENST00000504430 NEK10Q6ZWH5 1172 aa5.92□□□□□ -1.46
NIPBL-204ENST00000504430 CCDC33Q8N5R6 958 aa5.92□□□□□ -1.46
NIPBL-204ENST00000504430 TEX9Q8N6V9 391 aa5.92□□□□□ -1.46
NIPBL-204ENST00000504430 LMBR1Q8WVP7 490 aa5.92□□□□□ -1.46
NIPBL-204ENST00000504430 NUP88Q99567 741 aaPredicted RBP5.92□□□□□ -1.46
NIPBL-204ENST00000504430 USP26Q9BXU7 913 aa5.92□□□□□ -1.46
NIPBL-204ENST00000504430 GHITMQ9H3K2 345 aa5.92□□□□□ -1.46
NIPBL-204ENST00000504430 OLA1Q9NTK5 396 aaKnown RBP5.92□□□□□ -1.46
NIPBL-204ENST00000504430 MTRRQ9UBK8 725 aa5.92□□□□□ -1.46
NIPBL-204ENST00000504430 BTBD11A6QL63 1104 aa5.91□□□□□ -1.46
NIPBL-204ENST00000504430 HTATSF1O43719 755 aaKnown RBP5.91□□□□□ -1.46
NIPBL-204ENST00000504430 TMEM253P0C7T8 217 aa5.91□□□□□ -1.46
NIPBL-204ENST00000504430 CD247P20963 164 aa5.91□□□□□ -1.46
NIPBL-204ENST00000504430 ADSLP30566 484 aaPredicted RBP5.91□□□□□ -1.46
NIPBL-204ENST00000504430 MLECQ14165 292 aa5.91□□□□□ -1.46
NIPBL-204ENST00000504430 ZKSCAN8Q15776 578 aaPredicted RBP5.91□□□□□ -1.46
NIPBL-204ENST00000504430 RPUSD3Q6P087 351 aaKnown RBP5.91□□□□□ -1.46
NIPBL-204ENST00000504430 KDELC2Q7Z4H8 507 aa5.91□□□□□ -1.46
NIPBL-204ENST00000504430 EPHX4Q8IUS5 362 aa5.91□□□□□ -1.46
NIPBL-204ENST00000504430 TRIM59Q8IWR1 403 aa5.91□□□□□ -1.46
NIPBL-204ENST00000504430 ZNF527Q8NB42 609 aa5.91□□□□□ -1.46
NIPBL-204ENST00000504430 PHF20Q9BVI0 1012 aa5.91□□□□□ -1.46
NIPBL-204ENST00000504430 SCUBE2Q9NQ36 999 aa5.91□□□□□ -1.46
NIPBL-204ENST00000504430 HAUS2Q9NVX0 235 aa5.91□□□□□ -1.46
NIPBL-204ENST00000504430 ZNF711Q9Y462 761 aa5.91□□□□□ -1.46
NIPBL-204ENST00000504430 B3GALT2O43825 422 aa5.91□□□□□ -1.46
NIPBL-204ENST00000504430 LSSP48449 732 aa5.91□□□□□ -1.46
NIPBL-204ENST00000504430 CASP5P51878 434 aa5.91□□□□□ -1.46
NIPBL-204ENST00000504430 ALDH6A1Q02252 535 aaKnown RBP5.91□□□□□ -1.46
NIPBL-204ENST00000504430 WSCD2Q2TBF2 565 aa5.91□□□□□ -1.46
NIPBL-204ENST00000504430 TOR2AQ5JU69 321 aa5.91□□□□□ -1.46
NIPBL-204ENST00000504430 RNF220Q5VTB9 566 aa5.91□□□□□ -1.46
NIPBL-204ENST00000504430 KIAA1211Q6ZU35 1233 aa5.91□□□□□ -1.46
NIPBL-204ENST00000504430 SAPCD2Q86UD0 394 aa5.91□□□□□ -1.46
NIPBL-204ENST00000504430 SLC44A2Q8IWA5 706 aaPredicted RBP5.91□□□□□ -1.46
NIPBL-204ENST00000504430 CCDC170Q8IYT3 715 aa5.91□□□□□ -1.46
NIPBL-204ENST00000504430 HTRA1Q92743 480 aa5.91□□□□□ -1.46
NIPBL-204ENST00000504430 TEX13BQ9BXU2 312 aa5.91□□□□□ -1.46
NIPBL-204ENST00000504430 QRSL1Q9H0R6 528 aaKnown RBP5.91□□□□□ -1.46
NIPBL-204ENST00000504430 TMOD4Q9NZQ9 345 aa5.91□□□□□ -1.46
NIPBL-204ENST00000504430 WDR35Q9P2L0 1181 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms