RNA–Protein interactions for RNA: ENST00000501271.2

CLIP1-204, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,426 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-204ENST00000501271 EPB41P11171 864 aaKnown RBP10.79□□□□□ -0.68
CLIP1-204ENST00000501271 HMGB2P26583 209 aaKnown RBP10.79□□□□□ -0.68
CLIP1-204ENST00000501271 TNFRSF8P28908 595 aa10.79□□□□□ -0.68
CLIP1-204ENST00000501271 NMT1P30419 496 aaKnown RBP10.79□□□□□ -0.68
CLIP1-204ENST00000501271 EPHB4P54760 987 aa10.79□□□□□ -0.68
CLIP1-204ENST00000501271 LRCH2Q5VUJ6 765 aa10.79□□□□□ -0.68
CLIP1-204ENST00000501271 GJB7Q6PEY0 223 aa10.79□□□□□ -0.68
CLIP1-204ENST00000501271 CCDC174Q6PII3 467 aa10.79□□□□□ -0.68
CLIP1-204ENST00000501271 LEKR1Q6ZMV7 388 aa10.79□□□□□ -0.68
CLIP1-204ENST00000501271 TPH2Q8IWU9 490 aa10.79□□□□□ -0.68
CLIP1-204ENST00000501271 TSEN2Q8NCE0 465 aaKnown RBP10.79□□□□□ -0.68
CLIP1-204ENST00000501271 FLAD1Q8NFF5 587 aa10.79□□□□□ -0.68
CLIP1-204ENST00000501271 ZFP91Q96JP5 570 aaPredicted RBP10.79□□□□□ -0.68
CLIP1-204ENST00000501271 GOLPH3Q9H4A6 298 aa10.79□□□□□ -0.68
CLIP1-204ENST00000501271 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.79□□□□□ -0.68
CLIP1-204ENST00000501271 RNF14Q9UBS8 474 aa10.79□□□□□ -0.68
CLIP1-204ENST00000501271 PCDHB13Q9Y5F0 798 aa10.79□□□□□ -0.68
CLIP1-204ENST00000501271 BTNL10A8MVZ5 291 aa10.79□□□□□ -0.68
CLIP1-204ENST00000501271 RPL13P26373 211 aaKnown RBP10.79□□□□□ -0.68
CLIP1-204ENST00000501271 PRKCIP41743 596 aa10.79□□□□□ -0.68
CLIP1-204ENST00000501271 JAM2P57087 298 aa10.79□□□□□ -0.68
CLIP1-204ENST00000501271 ZC2HC1CQ53FD0 456 aaPredicted RBP10.79□□□□□ -0.68
CLIP1-204ENST00000501271 GBP6Q6ZN66 633 aa10.79□□□□□ -0.68
CLIP1-204ENST00000501271 C1orf186Q6ZWK4 172 aa10.79□□□□□ -0.68
CLIP1-204ENST00000501271 KSR1Q8IVT5 923 aa10.79□□□□□ -0.68
CLIP1-204ENST00000501271 C7orf43Q8WVR3 580 aa10.79□□□□□ -0.68
CLIP1-204ENST00000501271 BORCS6Q96GS4 357 aa10.79□□□□□ -0.68
CLIP1-204ENST00000501271 PLEKHA4Q9H4M7 779 aa10.79□□□□□ -0.68
CLIP1-204ENST00000501271 METTL14Q9HCE5 456 aaKnown RBP10.79□□□□□ -0.68
CLIP1-204ENST00000501271 TUFT1Q9NNX1 390 aa10.79□□□□□ -0.68
CLIP1-204ENST00000501271 WRAP73Q9P2S5 460 aaPredicted RBP10.79□□□□□ -0.68
CLIP1-204ENST00000501271 NAGPAQ9UK23 515 aa10.79□□□□□ -0.68
CLIP1-204ENST00000501271 ESYT3A0FGR9 886 aa10.78□□□□□ -0.68
CLIP1-204ENST00000501271 CLRN2A0PK11 232 aa10.78□□□□□ -0.68
CLIP1-204ENST00000501271 RPS6KA5O75582 802 aa10.78□□□□□ -0.68
CLIP1-204ENST00000501271 FAM13AO94988 1023 aa10.78□□□□□ -0.68
CLIP1-204ENST00000501271 GAP43P17677 238 aa10.78□□□□□ -0.68
CLIP1-204ENST00000501271 RNASE9P60153 205 aaKnown RBP10.78□□□□□ -0.68
CLIP1-204ENST00000501271 PPP2R5CQ13362 524 aa10.78□□□□□ -0.68
CLIP1-204ENST00000501271 COG2Q14746 738 aa10.78□□□□□ -0.68
CLIP1-204ENST00000501271 GLE1Q53GS7 698 aaKnown RBP10.78□□□□□ -0.68
CLIP1-204ENST00000501271 EMBQ6PCB8 327 aa10.78□□□□□ -0.68
CLIP1-204ENST00000501271 MYCT1Q8N699 235 aa10.78□□□□□ -0.68
CLIP1-204ENST00000501271 SLC5A5Q92911 643 aa10.78□□□□□ -0.68
CLIP1-204ENST00000501271 CAVIN3Q969G5 261 aa10.78□□□□□ -0.68
CLIP1-204ENST00000501271 TRERF1Q96PN7 1200 aa10.78□□□□□ -0.68
CLIP1-204ENST00000501271 FIZ1Q96SL8 496 aa10.78□□□□□ -0.68
CLIP1-204ENST00000501271 ARHGEF10LQ9HCE6 1279 aa10.78□□□□□ -0.68
CLIP1-204ENST00000501271 HERC5Q9UII4 1024 aaKnown RBP10.78□□□□□ -0.68
CLIP1-204ENST00000501271 FBXL5Q9UKA1 691 aa10.78□□□□□ -0.68
CLIP1-204ENST00000501271 SYNPO2Q9UMS6 1093 aa10.78□□□□□ -0.68
CLIP1-204ENST00000501271 NENFQ9UMX5 172 aa10.78□□□□□ -0.68
CLIP1-204ENST00000501271 TMX2Q9Y320 296 aa10.78□□□□□ -0.68
CLIP1-204ENST00000501271 LOXHD1Q8IVV2 1947 aa10.78□□□□□ -0.68
CLIP1-204ENST00000501271 EIF3DO15371 548 aaKnown RBP eCLIP10.78□□□□□ -0.68
CLIP1-204ENST00000501271 HEXIM1O94992 359 aaKnown RBP10.78□□□□□ -0.68
CLIP1-204ENST00000501271 SLC15A2Q16348 729 aa10.78□□□□□ -0.68
CLIP1-204ENST00000501271 PTPROQ16827 1216 aa10.78□□□□□ -0.68
CLIP1-204ENST00000501271 C10orf76Q5T2E6 689 aa10.78□□□□□ -0.68
CLIP1-204ENST00000501271 ALKBH5Q6P6C2 394 aaKnown RBP10.78□□□□□ -0.68
CLIP1-204ENST00000501271 FOXR1Q6PIV2 292 aa10.78□□□□□ -0.68
CLIP1-204ENST00000501271 GOLGA6L1Q8N7Z2 621 aa10.78□□□□□ -0.68
CLIP1-204ENST00000501271 GDF3Q9NR23 364 aa10.78□□□□□ -0.68
CLIP1-204ENST00000501271 BZW2Q9Y6E2 419 aaKnown RBP10.78□□□□□ -0.68
CLIP1-204ENST00000501271 FRMPD4Q14CM0 1322 aa10.78□□□□□ -0.68
CLIP1-204ENST00000501271 SPDYE2BA6NHP3 402 aa10.77□□□□□ -0.68
CLIP1-204ENST00000501271 GCOM1H8Y6P7 765 aaPredicted RBP10.77□□□□□ -0.68
CLIP1-204ENST00000501271 PPIP5K2O43314 1243 aa10.77□□□□□ -0.68
CLIP1-204ENST00000501271 POLR2MP0CAP2 368 aa10.77□□□□□ -0.68
CLIP1-204ENST00000501271 SPDYE6P0CI01 402 aa10.77□□□□□ -0.68
CLIP1-204ENST00000501271 CARSP49589 748 aaKnown RBP10.77□□□□□ -0.68
CLIP1-204ENST00000501271 PRELPP51888 382 aa10.77□□□□□ -0.68
CLIP1-204ENST00000501271 ZYXQ15942 572 aaKnown RBP10.77□□□□□ -0.68
CLIP1-204ENST00000501271 LRRC31Q6UY01 552 aa10.77□□□□□ -0.68
CLIP1-204ENST00000501271 CDAN1Q8IWY9 1227 aa10.77□□□□□ -0.68
CLIP1-204ENST00000501271 FAM186BQ8IYM0 893 aa10.77□□□□□ -0.68
CLIP1-204ENST00000501271 LRRC57Q8N9N7 239 aa10.77□□□□□ -0.68
CLIP1-204ENST00000501271 KRT12Q99456 494 aa10.77□□□□□ -0.68
CLIP1-204ENST00000501271 SH3GL2Q99962 352 aa10.77□□□□□ -0.68
CLIP1-204ENST00000501271 RANBP17Q9H2T7 1088 aaKnown RBP10.77□□□□□ -0.68
CLIP1-204ENST00000501271 PARVGQ9HBI0 331 aa10.77□□□□□ -0.68
CLIP1-204ENST00000501271 GOPCQ9HD26 462 aa10.77□□□□□ -0.68
CLIP1-204ENST00000501271 ZBTB21Q9ULJ3 1066 aa10.77□□□□□ -0.68
CLIP1-204ENST00000501271 GTPBP10A4D1E9 387 aaKnown RBP10.77□□□□□ -0.69
CLIP1-204ENST00000501271 TULP2O00295 520 aa10.77□□□□□ -0.69
CLIP1-204ENST00000501271 GAS7O60861 476 aa10.77□□□□□ -0.69
CLIP1-204ENST00000501271 KIF4AO95239 1232 aa10.77□□□□□ -0.69
CLIP1-204ENST00000501271 GUCY2DQ02846 1103 aa10.77□□□□□ -0.69
CLIP1-204ENST00000501271 KCTD17Q8N5Z5 321 aa10.77□□□□□ -0.69
CLIP1-204ENST00000501271 USP38Q8NB14 1042 aa10.77□□□□□ -0.69
CLIP1-204ENST00000501271 OLIG1Q8TAK6 271 aa10.77□□□□□ -0.69
CLIP1-204ENST00000501271 CNKSR1Q969H4 720 aa10.77□□□□□ -0.69
CLIP1-204ENST00000501271 UNC45AQ9H3U1 944 aa10.77□□□□□ -0.69
CLIP1-204ENST00000501271 EPB41L5Q9HCM4 733 aa10.77□□□□□ -0.69
CLIP1-204ENST00000501271 NFU1Q9UMS0 254 aa10.77□□□□□ -0.69
CLIP1-204ENST00000501271 CNTNAP1P78357 1384 aa10.76□□□□□ -0.69
CLIP1-204ENST00000501271 SHTN1A0MZ66 631 aa10.76□□□□□ -0.69
CLIP1-204ENST00000501271 GOLGA6CA6NDK9 693 aa10.76□□□□□ -0.69
CLIP1-204ENST00000501271 DDX3XO00571 662 aaKnown RBP eCLIP10.76□□□□□ -0.69
CLIP1-204ENST00000501271 KCNK3O14649 394 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms