RNA–Protein interactions for RNA: ENST00000498529.5

CSNK1E-214, Transcript of casein kinase 1 epsilon, humanhuman

TSL 3

Gene CSNK1E, Length 381 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-214ENST00000498529 PLAGL2Q9UPG8 496 aa6.51□□□□□ -1.37
CSNK1E-214ENST00000498529 RWDD3Q9Y3V2 267 aa6.51□□□□□ -1.37
CSNK1E-214ENST00000498529 USP15Q9Y4E8 981 aaPredicted RBP6.51□□□□□ -1.37
CSNK1E-214ENST00000498529 PCDHGC5Q9Y5F6 944 aa6.51□□□□□ -1.37
CSNK1E-214ENST00000498529 TDRD15B5MCY1 1934 aaKnown RBP6.5□□□□□ -1.37
CSNK1E-214ENST00000498529 CFAP47Q6ZTR5 3102 aa6.5□□□□□ -1.37
CSNK1E-214ENST00000498529 PRR23AA6NEV1 266 aa6.5□□□□□ -1.37
CSNK1E-214ENST00000498529 CYTH3O43739 400 aa6.5□□□□□ -1.37
CSNK1E-214ENST00000498529 PDGFBP01127 241 aaPredicted RBP6.5□□□□□ -1.37
CSNK1E-214ENST00000498529 ARP10275 920 aa6.5□□□□□ -1.37
CSNK1E-214ENST00000498529 NBL1P41271 181 aa6.5□□□□□ -1.37
CSNK1E-214ENST00000498529 CHMP4BP1P59074 171 aa6.5□□□□□ -1.37
CSNK1E-214ENST00000498529 HAND2P61296 217 aa6.5□□□□□ -1.37
CSNK1E-214ENST00000498529 RBM10P98175 930 aaKnown RBP6.5□□□□□ -1.37
CSNK1E-214ENST00000498529 FUT2Q10981 343 aa6.5□□□□□ -1.37
CSNK1E-214ENST00000498529 NMIQ13287 307 aaPredicted RBP6.5□□□□□ -1.37
CSNK1E-214ENST00000498529 LAPTM4AQ15012 233 aa6.5□□□□□ -1.37
CSNK1E-214ENST00000498529 PKN1Q16512 942 aa6.5□□□□□ -1.37
CSNK1E-214ENST00000498529 NAALADL2Q58DX5 795 aa6.5□□□□□ -1.37
CSNK1E-214ENST00000498529 KCNV1Q6PIU1 500 aa6.5□□□□□ -1.37
CSNK1E-214ENST00000498529 METTL7BQ6UX53 244 aa6.5□□□□□ -1.37
CSNK1E-214ENST00000498529 MCF2L2Q86YR7 1114 aa6.5□□□□□ -1.37
CSNK1E-214ENST00000498529 CMTR2Q8IYT2 770 aaKnown RBP6.5□□□□□ -1.37
CSNK1E-214ENST00000498529 FIBCD1Q8N539 461 aa6.5□□□□□ -1.37
CSNK1E-214ENST00000498529 SAMD3Q8N6K7 520 aa6.5□□□□□ -1.37
CSNK1E-214ENST00000498529 IL17RAQ96F46 866 aa6.5□□□□□ -1.37
CSNK1E-214ENST00000498529 SPATA33Q96N06 139 aa6.5□□□□□ -1.37
CSNK1E-214ENST00000498529 ZKSCAN3Q9BRR0 538 aa6.5□□□□□ -1.37
CSNK1E-214ENST00000498529 S1PR5Q9H228 398 aa6.5□□□□□ -1.37
CSNK1E-214ENST00000498529 IL25Q9H293 177 aa6.5□□□□□ -1.37
CSNK1E-214ENST00000498529 MAD2L2Q9UI95 211 aa6.5□□□□□ -1.37
CSNK1E-214ENST00000498529 BARX2Q9UMQ3 279 aaPredicted RBP6.5□□□□□ -1.37
CSNK1E-214ENST00000498529 CHD6Q8TD26 2715 aa6.5□□□□□ -1.37
CSNK1E-214ENST00000498529 NOTCH4Q99466 2003 aa6.5□□□□□ -1.37
CSNK1E-214ENST00000498529 CHD8Q9HCK8 2581 aa6.5□□□□□ -1.37
CSNK1E-214ENST00000498529 KDM3AQ9Y4C1 1321 aa6.5□□□□□ -1.37
CSNK1E-214ENST00000498529 COL4A3Q01955 1670 aa6.49□□□□□ -1.37
CSNK1E-214ENST00000498529 PALM3A6NDB9 673 aaPredicted RBP6.49□□□□□ -1.37
CSNK1E-214ENST00000498529 SPATA31C2B4DYI2 1134 aa6.49□□□□□ -1.37
CSNK1E-214ENST00000498529 ENPP3O14638 875 aa6.49□□□□□ -1.37
CSNK1E-214ENST00000498529 UPP2O95045 317 aa6.49□□□□□ -1.37
CSNK1E-214ENST00000498529 GHRP10912 638 aa6.49□□□□□ -1.37
CSNK1E-214ENST00000498529 KCNA2P16389 499 aa6.49□□□□□ -1.37
CSNK1E-214ENST00000498529 AVPR2P30518 371 aa6.49□□□□□ -1.37
CSNK1E-214ENST00000498529 PDE1AP54750 535 aa6.49□□□□□ -1.37
CSNK1E-214ENST00000498529 FOXK2Q01167 660 aa6.49□□□□□ -1.37
CSNK1E-214ENST00000498529 PTPN21Q16825 1174 aa6.49□□□□□ -1.37
CSNK1E-214ENST00000498529 MCMDC2Q4G0Z9 681 aa6.49□□□□□ -1.37
CSNK1E-214ENST00000498529 RRP12Q5JTH9 1297 aaKnown RBP6.49□□□□□ -1.37
CSNK1E-214ENST00000498529 ARHGEF16Q5VV41 709 aa6.49□□□□□ -1.37
CSNK1E-214ENST00000498529 SYCE2Q6PIF2 218 aa6.49□□□□□ -1.37
CSNK1E-214ENST00000498529 TMEM184AQ6ZMB5 413 aa6.49□□□□□ -1.37
CSNK1E-214ENST00000498529 TSHZ1Q6ZSZ6 1077 aa6.49□□□□□ -1.37
CSNK1E-214ENST00000498529 TMEM105Q8N8V8 129 aa6.49□□□□□ -1.37
CSNK1E-214ENST00000498529 RASGRP4Q8TDF6 673 aa6.49□□□□□ -1.37
CSNK1E-214ENST00000498529 TSC1Q92574 1164 aa6.49□□□□□ -1.37
CSNK1E-214ENST00000498529 PBXIP1Q96AQ6 731 aa6.49□□□□□ -1.37
CSNK1E-214ENST00000498529 EVI5LQ96CN4 794 aa6.49□□□□□ -1.37
CSNK1E-214ENST00000498529 PCYT2Q99447 389 aa6.49□□□□□ -1.37
CSNK1E-214ENST00000498529 PHF7Q9BWX1 381 aaPredicted RBP6.49□□□□□ -1.37
CSNK1E-214ENST00000498529 BCL11AQ9H165 835 aa6.49□□□□□ -1.37
CSNK1E-214ENST00000498529 TMX1Q9H3N1 280 aa6.49□□□□□ -1.37
CSNK1E-214ENST00000498529 CHMP4BQ9H444 224 aaKnown RBP6.49□□□□□ -1.37
CSNK1E-214ENST00000498529 RIOX1Q9H6W3 641 aa6.49□□□□□ -1.37
CSNK1E-214ENST00000498529 SETD4Q9NVD3 440 aa6.49□□□□□ -1.37
CSNK1E-214ENST00000498529 MRPL11Q9Y3B7 192 aaKnown RBP6.49□□□□□ -1.37
CSNK1E-214ENST00000498529 NRCAMQ92823 1304 aa6.49□□□□□ -1.37
CSNK1E-214ENST00000498529 IGSF9BQ9UPX0 1349 aa6.49□□□□□ -1.37
CSNK1E-214ENST00000498529 ZBTB5O15062 677 aa6.48□□□□□ -1.37
CSNK1E-214ENST00000498529 SORBS3O60504 671 aa6.48□□□□□ -1.37
CSNK1E-214ENST00000498529 RNF40O75150 1001 aa6.48□□□□□ -1.37
CSNK1E-214ENST00000498529 CFBP00751 764 aa6.48□□□□□ -1.37
CSNK1E-214ENST00000498529 PDIA4P13667 645 aaKnown RBP6.48□□□□□ -1.37
CSNK1E-214ENST00000498529 HOXA13P31271 388 aaPredicted RBP6.48□□□□□ -1.37
CSNK1E-214ENST00000498529 GATMP50440 423 aa6.48□□□□□ -1.37
CSNK1E-214ENST00000498529 DUSP6Q16828 381 aa6.48□□□□□ -1.37
CSNK1E-214ENST00000498529 CWF19L1Q69YN2 538 aaKnown RBP6.48□□□□□ -1.37
CSNK1E-214ENST00000498529 TAF2Q6P1X5 1199 aa6.48□□□□□ -1.37
CSNK1E-214ENST00000498529 RETREG3Q86VR2 466 aa6.48□□□□□ -1.37
CSNK1E-214ENST00000498529 NPAS4Q8IUM7 802 aa6.48□□□□□ -1.37
CSNK1E-214ENST00000498529 KLHL23Q8NBE8 558 aa6.48□□□□□ -1.37
CSNK1E-214ENST00000498529 POF1BQ8WVV4 589 aa6.48□□□□□ -1.37
CSNK1E-214ENST00000498529 ESR2Q92731 530 aa6.48□□□□□ -1.37
CSNK1E-214ENST00000498529 CRBNQ96SW2 442 aa6.48□□□□□ -1.37
CSNK1E-214ENST00000498529 SENP7Q9BQF6 1050 aa6.48□□□□□ -1.37
CSNK1E-214ENST00000498529 AMNQ9BXJ7 453 aa6.48□□□□□ -1.37
CSNK1E-214ENST00000498529 USP26Q9BXU7 913 aa6.48□□□□□ -1.37
CSNK1E-214ENST00000498529 RNF19AQ9NV58 838 aa6.48□□□□□ -1.37
CSNK1E-214ENST00000498529 RCAN3Q9UKA8 241 aa6.48□□□□□ -1.37
CSNK1E-214ENST00000498529 SQORQ9Y6N5 450 aa6.48□□□□□ -1.37
CSNK1E-214ENST00000498529 VWA8A3KMH1 1905 aa6.48□□□□□ -1.37
CSNK1E-214ENST00000498529 GSTTP1A0A1W2PQM5 241 aa6.47□□□□□ -1.37
CSNK1E-214ENST00000498529 B4E1Z4 1266 aa6.47□□□□□ -1.37
CSNK1E-214ENST00000498529 CFAP99D6REC4 459 aa6.47□□□□□ -1.37
CSNK1E-214ENST00000498529 PIK3CDO00329 1044 aa6.47□□□□□ -1.37
CSNK1E-214ENST00000498529 MEIS2O14770 477 aa6.47□□□□□ -1.37
CSNK1E-214ENST00000498529 FIBPO43427 364 aa6.47□□□□□ -1.37
CSNK1E-214ENST00000498529 MGEA5O60502 916 aa6.47□□□□□ -1.37
CSNK1E-214ENST00000498529 STAM2O75886 525 aa6.47□□□□□ -1.37
CSNK1E-214ENST00000498529 CCND2P30279 289 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms