RNA–Protein interactions for RNA: ENST00000498223.3

CTTN-208, Transcript of cortactin, humanhuman

TSL 3

Gene CTTN, Length 523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-208ENST00000498223 A0A1B0GVL5 298 aa12.77□□□□□ -0.37
CTTN-208ENST00000498223 A0A1W2PPC1 479 aa12.77□□□□□ -0.37
CTTN-208ENST00000498223 C17orf102A2RUQ5 167 aa12.77□□□□□ -0.37
CTTN-208ENST00000498223 TMEM150BA6NC51 233 aa12.77□□□□□ -0.37
CTTN-208ENST00000498223 RRN3P2A6NIE6 340 aa12.77□□□□□ -0.37
CTTN-208ENST00000498223 E9PMD0 336 aa12.77□□□□□ -0.37
CTTN-208ENST00000498223 ARVCFO00192 962 aa12.77□□□□□ -0.37
CTTN-208ENST00000498223 HAS3O00219 553 aa12.77□□□□□ -0.37
CTTN-208ENST00000498223 ZBTB39O15060 712 aa12.77□□□□□ -0.37
CTTN-208ENST00000498223 GNAT1P11488 350 aa12.77□□□□□ -0.37
CTTN-208ENST00000498223 PLCG1P19174 1290 aa12.77□□□□□ -0.37
CTTN-208ENST00000498223 CMA1P23946 247 aa12.77□□□□□ -0.37
CTTN-208ENST00000498223 GRIK4Q16099 956 aa12.77□□□□□ -0.37
CTTN-208ENST00000498223 ECM1Q16610 540 aa12.77□□□□□ -0.37
CTTN-208ENST00000498223 ZNF484Q5JVG2 852 aa12.77□□□□□ -0.37
CTTN-208ENST00000498223 NFRKBQ6P4R8 1299 aa12.77□□□□□ -0.37
CTTN-208ENST00000498223 SLC39A5Q6ZMH5 540 aa12.77□□□□□ -0.37
CTTN-208ENST00000498223 TRAPPC12Q8WVT3 735 aa12.77□□□□□ -0.37
CTTN-208ENST00000498223 DHX58Q96C10 678 aa12.77□□□□□ -0.37
CTTN-208ENST00000498223 PNMA5Q96PV4 448 aa12.77□□□□□ -0.37
CTTN-208ENST00000498223 SH2D3AQ9BRG2 576 aa12.77□□□□□ -0.37
CTTN-208ENST00000498223 ANKEF1Q9NU02 776 aa12.77□□□□□ -0.37
CTTN-208ENST00000498223 SETD4Q9NVD3 440 aa12.77□□□□□ -0.37
CTTN-208ENST00000498223 HDAC6Q9UBN7 1215 aa12.77□□□□□ -0.37
CTTN-208ENST00000498223 A0A1W2PQ27 194 aa12.76□□□□□ -0.37
CTTN-208ENST00000498223 A0A1W2PQ64 194 aa12.76□□□□□ -0.37
CTTN-208ENST00000498223 A0A1W2PQD8 194 aa12.76□□□□□ -0.37
CTTN-208ENST00000498223 TLR3O15455 904 aaKnown RBP12.76□□□□□ -0.37
CTTN-208ENST00000498223 POLR2DO15514 142 aaKnown RBP12.76□□□□□ -0.37
CTTN-208ENST00000498223 LYPLA2O95372 231 aa12.76□□□□□ -0.37
CTTN-208ENST00000498223 XRCC6P12956 609 aaKnown RBP eCLIP12.76□□□□□ -0.37
CTTN-208ENST00000498223 PFKFB1P16118 471 aa12.76□□□□□ -0.37
CTTN-208ENST00000498223 NPEPPSP55786 919 aa12.76□□□□□ -0.37
CTTN-208ENST00000498223 PTPN11Q06124 597 aaPredicted RBP12.76□□□□□ -0.37
CTTN-208ENST00000498223 TBC1D8BQ0IIM8 1120 aa12.76□□□□□ -0.37
CTTN-208ENST00000498223 TMEM119Q4V9L6 283 aa12.76□□□□□ -0.37
CTTN-208ENST00000498223 HYIQ5T013 277 aa12.76□□□□□ -0.37
CTTN-208ENST00000498223 CLEC17AQ6ZS10 378 aa12.76□□□□□ -0.37
CTTN-208ENST00000498223 PYM1Q9BRP8 204 aaKnown RBP12.76□□□□□ -0.37
CTTN-208ENST00000498223 SEZ6LQ9BYH1 1024 aa12.76□□□□□ -0.37
CTTN-208ENST00000498223 BHMT2Q9H2M3 363 aa12.76□□□□□ -0.37
CTTN-208ENST00000498223 CYP26B1Q9NR63 512 aa12.76□□□□□ -0.37
CTTN-208ENST00000498223 BMP2KQ9NSY1 1161 aaPredicted RBP12.76□□□□□ -0.37
CTTN-208ENST00000498223 KCNH3Q9ULD8 1083 aa12.76□□□□□ -0.37
CTTN-208ENST00000498223 ATP11BQ9Y2G3 1177 aa12.76□□□□□ -0.37
CTTN-208ENST00000498223 NRCAMQ92823 1304 aa12.76□□□□□ -0.37
CTTN-208ENST00000498223 COL1A2P08123 1366 aa12.76□□□□□ -0.37
CTTN-208ENST00000498223 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.75□□□□□ -0.37
CTTN-208ENST00000498223 DCDC2CA8MYV0 355 aa12.75□□□□□ -0.37
CTTN-208ENST00000498223 PQBP1O60828 265 aaKnown RBP12.75□□□□□ -0.37
CTTN-208ENST00000498223 GADD45BO75293 160 aaPredicted RBP12.75□□□□□ -0.37
CTTN-208ENST00000498223 EYA4O95677 639 aa12.75□□□□□ -0.37
CTTN-208ENST00000498223 KRT18P05783 430 aaKnown RBP12.75□□□□□ -0.37
CTTN-208ENST00000498223 COL6A1P12109 1028 aa12.75□□□□□ -0.37
CTTN-208ENST00000498223 KLRC1P26715 233 aa12.75□□□□□ -0.37
CTTN-208ENST00000498223 SYKP43405 635 aa12.75□□□□□ -0.37
CTTN-208ENST00000498223 POLGP54098 1239 aaPredicted RBP12.75□□□□□ -0.37
CTTN-208ENST00000498223 UBE2HP62256 183 aa12.75□□□□□ -0.37
CTTN-208ENST00000498223 ZNF200P98182 395 aaPredicted RBP12.75□□□□□ -0.37
CTTN-208ENST00000498223 MCM6Q14566 821 aa12.75□□□□□ -0.37
CTTN-208ENST00000498223 PTGISQ16647 500 aa12.75□□□□□ -0.37
CTTN-208ENST00000498223 MROH7Q68CQ1 1323 aa12.75□□□□□ -0.37
CTTN-208ENST00000498223 ANO5Q75V66 913 aa12.75□□□□□ -0.37
CTTN-208ENST00000498223 CEP57L1Q8IYX8 460 aa12.75□□□□□ -0.37
CTTN-208ENST00000498223 C7orf61Q8IZ16 206 aa12.75□□□□□ -0.37
CTTN-208ENST00000498223 METTL13Q8N6R0 699 aa12.75□□□□□ -0.37
CTTN-208ENST00000498223 IQUBQ8NA54 791 aa12.75□□□□□ -0.37
CTTN-208ENST00000498223 TMEM87AQ8NBN3 555 aa12.75□□□□□ -0.37
CTTN-208ENST00000498223 RETREG2Q8NC44 543 aa12.75□□□□□ -0.37
CTTN-208ENST00000498223 LMBR1Q8WVP7 490 aa12.75□□□□□ -0.37
CTTN-208ENST00000498223 RAD54LQ92698 747 aa12.75□□□□□ -0.37
CTTN-208ENST00000498223 NIFKQ9BYG3 293 aaKnown RBP12.75□□□□□ -0.37
CTTN-208ENST00000498223 SUGCTQ9HAC7 445 aa12.75□□□□□ -0.37
CTTN-208ENST00000498223 STK17AQ9UEE5 414 aa12.75□□□□□ -0.37
CTTN-208ENST00000498223 GTF2IRD1Q9UHL9 959 aa12.75□□□□□ -0.37
CTTN-208ENST00000498223 TUBE1Q9UJT0 475 aa12.75□□□□□ -0.37
CTTN-208ENST00000498223 DBR1Q9UK59 544 aaKnown RBP12.75□□□□□ -0.37
CTTN-208ENST00000498223 GRIN2DO15399 1336 aa12.74□□□□□ -0.37
CTTN-208ENST00000498223 A0A087X0B3 334 aa12.74□□□□□ -0.37
CTTN-208ENST00000498223 MAGEB2O15479 319 aa12.74□□□□□ -0.37
CTTN-208ENST00000498223 USO1O60763 962 aaKnown RBP12.74□□□□□ -0.37
CTTN-208ENST00000498223 STBD1O95210 358 aa12.74□□□□□ -0.37
CTTN-208ENST00000498223 PLA2G4BP0C869 781 aa12.74□□□□□ -0.37
CTTN-208ENST00000498223 RARRES1P49788 294 aa12.74□□□□□ -0.37
CTTN-208ENST00000498223 DNM2P50570 870 aa12.74□□□□□ -0.37
CTTN-208ENST00000498223 NDUFA8P51970 172 aa12.74□□□□□ -0.37
CTTN-208ENST00000498223 RTP1P59025 263 aa12.74□□□□□ -0.37
CTTN-208ENST00000498223 TRIM60Q495X7 471 aa12.74□□□□□ -0.37
CTTN-208ENST00000498223 GDF6Q6KF10 455 aaPredicted RBP12.74□□□□□ -0.37
CTTN-208ENST00000498223 SV2BQ7L1I2 683 aa12.74□□□□□ -0.37
CTTN-208ENST00000498223 KCNK18Q7Z418 384 aa12.74□□□□□ -0.37
CTTN-208ENST00000498223 EXOC8Q8IYI6 725 aa12.74□□□□□ -0.37
CTTN-208ENST00000498223 KCTD17Q8N5Z5 321 aa12.74□□□□□ -0.37
CTTN-208ENST00000498223 SLC7A3Q8WY07 619 aa12.74□□□□□ -0.37
CTTN-208ENST00000498223 LARP4BQ92615 738 aaKnown RBP12.74□□□□□ -0.37
CTTN-208ENST00000498223 JPH2Q9BR39 696 aaPredicted RBP12.74□□□□□ -0.37
CTTN-208ENST00000498223 GOLPH3LQ9H4A5 285 aa12.74□□□□□ -0.37
CTTN-208ENST00000498223 SERTAD1Q9UHV2 236 aa12.74□□□□□ -0.37
CTTN-208ENST00000498223 TREHO43280 583 aa12.73□□□□□ -0.37
CTTN-208ENST00000498223 CYP2C9P11712 490 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms