RNA–Protein interactions for RNA: ENST00000497089.1

HOXA9-206, Transcript of homeobox A9, humanhuman

TSL 1 (best)

Gene HOXA9, Length 1,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-206ENST00000497089 CTSHP09668 335 aa7.56□□□□□ -1.2
HOXA9-206ENST00000497089 EIF2AK2P19525 551 aaKnown RBP7.56□□□□□ -1.2
HOXA9-206ENST00000497089 PDE4BQ07343 736 aa7.56□□□□□ -1.2
HOXA9-206ENST00000497089 KLRC3Q07444 240 aa7.56□□□□□ -1.2
HOXA9-206ENST00000497089 CACNB2Q08289 660 aaPredicted RBP7.56□□□□□ -1.2
HOXA9-206ENST00000497089 TMEM132BQ14DG7 1078 aa7.56□□□□□ -1.2
HOXA9-206ENST00000497089 OLFML2BQ68BL8 750 aa7.56□□□□□ -1.2
HOXA9-206ENST00000497089 KANK3Q6NY19 840 aa7.56□□□□□ -1.2
HOXA9-206ENST00000497089 FAM35AQ86V20 835 aa7.56□□□□□ -1.2
HOXA9-206ENST00000497089 CHD1LQ86WJ1 897 aa7.56□□□□□ -1.2
HOXA9-206ENST00000497089 RIOX2Q8IUF8 465 aa7.56□□□□□ -1.2
HOXA9-206ENST00000497089 ZNF444Q8N0Y2 327 aaPredicted RBP7.56□□□□□ -1.2
HOXA9-206ENST00000497089 REPS2Q8NFH8 660 aa7.56□□□□□ -1.2
HOXA9-206ENST00000497089 CEP95Q96GE4 821 aa7.56□□□□□ -1.2
HOXA9-206ENST00000497089 ZKSCAN3Q9BRR0 538 aa7.56□□□□□ -1.2
HOXA9-206ENST00000497089 LNPKQ9C0E8 428 aa7.56□□□□□ -1.2
HOXA9-206ENST00000497089 NAPBQ9H115 298 aa7.56□□□□□ -1.2
HOXA9-206ENST00000497089 ZFYVE1Q9HBF4 777 aa7.56□□□□□ -1.2
HOXA9-206ENST00000497089 FBXO28Q9NVF7 368 aa7.56□□□□□ -1.2
HOXA9-206ENST00000497089 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.56□□□□□ -1.2
HOXA9-206ENST00000497089 STARD13Q9Y3M8 1113 aa7.56□□□□□ -1.2
HOXA9-206ENST00000497089 FRMPD3Q5JV73 1810 aa7.55□□□□□ -1.2
HOXA9-206ENST00000497089 RAD50Q92878 1312 aa7.55□□□□□ -1.2
HOXA9-206ENST00000497089 ALPK3Q96L96 1907 aa7.55□□□□□ -1.2
HOXA9-206ENST00000497089 A0A0D9SFI3 127 aa7.55□□□□□ -1.2
HOXA9-206ENST00000497089 H0YGN5 161 aa7.55□□□□□ -1.2
HOXA9-206ENST00000497089 PRDM1O75626 825 aa7.55□□□□□ -1.2
HOXA9-206ENST00000497089 TTLL1O95922 423 aa7.55□□□□□ -1.2
HOXA9-206ENST00000497089 NDUFB10O96000 172 aa7.55□□□□□ -1.2
HOXA9-206ENST00000497089 COL6A1P12109 1028 aa7.55□□□□□ -1.2
HOXA9-206ENST00000497089 CPB1P15086 417 aa7.55□□□□□ -1.2
HOXA9-206ENST00000497089 HOXB4P17483 251 aaPredicted RBP7.55□□□□□ -1.2
HOXA9-206ENST00000497089 ERCC5P28715 1186 aaPredicted RBP7.55□□□□□ -1.2
HOXA9-206ENST00000497089 COPB2P35606 906 aa7.55□□□□□ -1.2
HOXA9-206ENST00000497089 NOVP48745 357 aa7.55□□□□□ -1.2
HOXA9-206ENST00000497089 FAM83BQ5T0W9 1011 aa7.55□□□□□ -1.2
HOXA9-206ENST00000497089 MFSD14CQ5VZR4 134 aa7.55□□□□□ -1.2
HOXA9-206ENST00000497089 GMCL1P1Q8NEA9 526 aa7.55□□□□□ -1.2
HOXA9-206ENST00000497089 NPLOC4Q8TAT6 608 aa7.55□□□□□ -1.2
HOXA9-206ENST00000497089 SLF1Q9BQI6 1058 aa7.55□□□□□ -1.2
HOXA9-206ENST00000497089 LMBRD1Q9NUN5 540 aa7.55□□□□□ -1.2
HOXA9-206ENST00000497089 DZANK1Q9NVP4 752 aa7.55□□□□□ -1.2
HOXA9-206ENST00000497089 FLRT1Q9NZU1 646 aa7.55□□□□□ -1.2
HOXA9-206ENST00000497089 FEZ2Q9UHY8 353 aaPredicted RBP7.55□□□□□ -1.2
HOXA9-206ENST00000497089 CTNNA3Q9UI47 895 aa7.55□□□□□ -1.2
HOXA9-206ENST00000497089 ZNF214Q9UL59 606 aaPredicted RBP7.55□□□□□ -1.2
HOXA9-206ENST00000497089 TMEM238LA0A1B0GVL6 79 aa7.54□□□□□ -1.2
HOXA9-206ENST00000497089 FAM181BA6NEQ2 426 aa7.54□□□□□ -1.2
HOXA9-206ENST00000497089 SMTNL1A8MU46 457 aa7.54□□□□□ -1.2
HOXA9-206ENST00000497089 ORC4O43929 436 aa7.54□□□□□ -1.2
HOXA9-206ENST00000497089 MSCO60682 206 aa7.54□□□□□ -1.2
HOXA9-206ENST00000497089 PLA2G6O60733 806 aa7.54□□□□□ -1.2
HOXA9-206ENST00000497089 COBLO75128 1261 aa7.54□□□□□ -1.2
HOXA9-206ENST00000497089 SMNDC1O75940 238 aaKnown RBP eCLIP7.54□□□□□ -1.2
HOXA9-206ENST00000497089 REC8O95072 547 aa7.54□□□□□ -1.2
HOXA9-206ENST00000497089 FGAP02671 866 aa7.54□□□□□ -1.2
HOXA9-206ENST00000497089 TSPY3P0CV98 308 aa7.54□□□□□ -1.2
HOXA9-206ENST00000497089 TSPY8P0CW00 308 aa7.54□□□□□ -1.2
HOXA9-206ENST00000497089 ADORA2AP29274 412 aa7.54□□□□□ -1.2
HOXA9-206ENST00000497089 CCND3P30281 292 aaPredicted RBP7.54□□□□□ -1.2
HOXA9-206ENST00000497089 STAT3P40763 770 aa7.54□□□□□ -1.2
HOXA9-206ENST00000497089 DGKGP49619 791 aa7.54□□□□□ -1.2
HOXA9-206ENST00000497089 GTF2A1P52655 376 aaPredicted RBP7.54□□□□□ -1.2
HOXA9-206ENST00000497089 FANCCQ00597 558 aa7.54□□□□□ -1.2
HOXA9-206ENST00000497089 TFAP4Q01664 338 aa7.54□□□□□ -1.2
HOXA9-206ENST00000497089 MCMDC2Q4G0Z9 681 aa7.54□□□□□ -1.2
HOXA9-206ENST00000497089 VPS53Q5VIR6 699 aa7.54□□□□□ -1.2
HOXA9-206ENST00000497089 WDR78Q5VTH9 848 aa7.54□□□□□ -1.2
HOXA9-206ENST00000497089 DTHD1Q6ZMT9 781 aa7.54□□□□□ -1.2
HOXA9-206ENST00000497089 C20orf204Q6ZNR8 217 aa7.54□□□□□ -1.2
HOXA9-206ENST00000497089 CCDC129Q6ZRS4 1044 aa7.54□□□□□ -1.2
HOXA9-206ENST00000497089 NECAB2Q7Z6G3 386 aa7.54□□□□□ -1.2
HOXA9-206ENST00000497089 CCNJLQ8IV13 435 aa7.54□□□□□ -1.2
HOXA9-206ENST00000497089 PRPF38AQ8NAV1 312 aaKnown RBP7.54□□□□□ -1.2
HOXA9-206ENST00000497089 PAWRQ96IZ0 340 aaKnown RBP7.54□□□□□ -1.2
HOXA9-206ENST00000497089 FAM227BQ96M60 508 aa7.54□□□□□ -1.2
HOXA9-206ENST00000497089 NUP88Q99567 741 aaPredicted RBP7.54□□□□□ -1.2
HOXA9-206ENST00000497089 PBX4Q9BYU1 374 aa7.54□□□□□ -1.2
HOXA9-206ENST00000497089 RASSF4Q9H2L5 321 aa7.54□□□□□ -1.2
HOXA9-206ENST00000497089 IL17RBQ9NRM6 502 aa7.54□□□□□ -1.2
HOXA9-206ENST00000497089 SLC5A4Q9NY91 659 aa7.54□□□□□ -1.2
HOXA9-206ENST00000497089 CLIP2Q9UDT6 1046 aa7.54□□□□□ -1.2
HOXA9-206ENST00000497089 STK17AQ9UEE5 414 aa7.54□□□□□ -1.2
HOXA9-206ENST00000497089 NRBP1Q9UHY1 535 aa7.54□□□□□ -1.2
HOXA9-206ENST00000497089 DIS3Q9Y2L1 958 aaKnown RBP7.54□□□□□ -1.2
HOXA9-206ENST00000497089 NR2E3Q9Y5X4 410 aa7.54□□□□□ -1.2
HOXA9-206ENST00000497089 PLXNA1Q9UIW2 1896 aa7.54□□□□□ -1.2
HOXA9-206ENST00000497089 TRIOBPQ9H2D6 2365 aa7.53□□□□□ -1.2
HOXA9-206ENST00000497089 PDE2AO00408 941 aaPredicted RBP7.53□□□□□ -1.2
HOXA9-206ENST00000497089 ALBP02768 609 aa7.53□□□□□ -1.2
HOXA9-206ENST00000497089 HSPD1P10809 573 aaKnown RBP7.53□□□□□ -1.2
HOXA9-206ENST00000497089 PCP11498 1178 aaKnown RBP7.53□□□□□ -1.2
HOXA9-206ENST00000497089 FCER1AP12319 257 aa7.53□□□□□ -1.2
HOXA9-206ENST00000497089 CYBAP13498 195 aa7.53□□□□□ -1.2
HOXA9-206ENST00000497089 ACPPP15309 386 aa7.53□□□□□ -1.2
HOXA9-206ENST00000497089 SDSP20132 328 aa7.53□□□□□ -1.2
HOXA9-206ENST00000497089 NT5C2P49902 561 aa7.53□□□□□ -1.2
HOXA9-206ENST00000497089 ST13P50502 369 aaKnown RBP7.53□□□□□ -1.2
HOXA9-206ENST00000497089 SETQ01105 290 aaPredicted RBP7.53□□□□□ -1.2
HOXA9-206ENST00000497089 NMIQ13287 307 aaPredicted RBP7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms