RNA–Protein interactions for RNA: ENST00000497015.5

SRSF4-205, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 2

Gene SRSF4, Length 516 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-205ENST00000497015 CLCN5P51795 746 aa11.28□□□□□ -0.6
SRSF4-205ENST00000497015 MRPS9P82933 396 aaKnown RBP11.28□□□□□ -0.6
SRSF4-205ENST00000497015 ARHGAP4P98171 946 aa11.28□□□□□ -0.6
SRSF4-205ENST00000497015 KCNV1Q6PIU1 500 aa11.28□□□□□ -0.6
SRSF4-205ENST00000497015 CYB5R4Q7L1T6 521 aa11.28□□□□□ -0.6
SRSF4-205ENST00000497015 DGLUCYQ7Z3D6 616 aa11.28□□□□□ -0.6
SRSF4-205ENST00000497015 MICAL1Q8TDZ2 1067 aa11.28□□□□□ -0.6
SRSF4-205ENST00000497015 PPP2R3CQ969Q6 453 aa11.28□□□□□ -0.6
SRSF4-205ENST00000497015 USP26Q9BXU7 913 aa11.28□□□□□ -0.6
SRSF4-205ENST00000497015 VAT1LQ9HCJ6 419 aa11.28□□□□□ -0.6
SRSF4-205ENST00000497015 SORCS3Q9UPU3 1222 aa11.28□□□□□ -0.6
SRSF4-205ENST00000497015 MRPL11Q9Y3B7 192 aaKnown RBP11.28□□□□□ -0.6
SRSF4-205ENST00000497015 KIAA1671Q9BY89 1806 aa11.28□□□□□ -0.6
SRSF4-205ENST00000497015 MYO10Q9HD67 2058 aa11.28□□□□□ -0.6
SRSF4-205ENST00000497015 IFIT3O14879 490 aaKnown RBP11.27□□□□□ -0.61
SRSF4-205ENST00000497015 HSPA4P34932 840 aa11.27□□□□□ -0.61
SRSF4-205ENST00000497015 TECP42680 631 aa11.27□□□□□ -0.61
SRSF4-205ENST00000497015 FOXK1P85037 733 aa11.27□□□□□ -0.61
SRSF4-205ENST00000497015 APOBRQ0VD83 1088 aa11.27□□□□□ -0.61
SRSF4-205ENST00000497015 WTAPQ15007 396 aa11.27□□□□□ -0.61
SRSF4-205ENST00000497015 KANK3Q6NY19 840 aa11.27□□□□□ -0.61
SRSF4-205ENST00000497015 CYFIP1Q7L576 1253 aa11.27□□□□□ -0.61
SRSF4-205ENST00000497015 UBALD2Q8IYN6 164 aa11.27□□□□□ -0.61
SRSF4-205ENST00000497015 KIAA2013Q8IYS2 634 aa11.27□□□□□ -0.61
SRSF4-205ENST00000497015 IGDCC4Q8TDY8 1250 aa11.27□□□□□ -0.61
SRSF4-205ENST00000497015 DNAJB3Q8WWF6 145 aa11.27□□□□□ -0.61
SRSF4-205ENST00000497015 NEK1Q96PY6 1258 aa11.27□□□□□ -0.61
SRSF4-205ENST00000497015 TMX1Q9H3N1 280 aa11.27□□□□□ -0.61
SRSF4-205ENST00000497015 POMKQ9H5K3 350 aa11.27□□□□□ -0.61
SRSF4-205ENST00000497015 HIDE1A8MVS5 230 aa11.26□□□□□ -0.61
SRSF4-205ENST00000497015 SPATA31C2B4DYI2 1134 aa11.26□□□□□ -0.61
SRSF4-205ENST00000497015 FGF18O76093 207 aa11.26□□□□□ -0.61
SRSF4-205ENST00000497015 PARP1P09874 1014 aaKnown RBP11.26□□□□□ -0.61
SRSF4-205ENST00000497015 GNAT1P11488 350 aa11.26□□□□□ -0.61
SRSF4-205ENST00000497015 ANTXR2P58335 489 aa11.26□□□□□ -0.61
SRSF4-205ENST00000497015 MTMR3Q13615 1198 aa11.26□□□□□ -0.61
SRSF4-205ENST00000497015 SLC35G1Q2M3R5 365 aa11.26□□□□□ -0.61
SRSF4-205ENST00000497015 UTP14CQ5TAP6 766 aaKnown RBP11.26□□□□□ -0.61
SRSF4-205ENST00000497015 TMCO4Q5TGY1 634 aa11.26□□□□□ -0.61
SRSF4-205ENST00000497015 ZBTB33Q86T24 672 aa11.26□□□□□ -0.61
SRSF4-205ENST00000497015 NPAS4Q8IUM7 802 aa11.26□□□□□ -0.61
SRSF4-205ENST00000497015 FBXL16Q8N461 479 aa11.26□□□□□ -0.61
SRSF4-205ENST00000497015 RASGRP4Q8TDF6 673 aa11.26□□□□□ -0.61
SRSF4-205ENST00000497015 TMC2Q8TDI7 906 aa11.26□□□□□ -0.61
SRSF4-205ENST00000497015 DLL3Q9NYJ7 618 aa11.26□□□□□ -0.61
SRSF4-205ENST00000497015 LIMD1Q9UGP4 676 aa11.26□□□□□ -0.61
SRSF4-205ENST00000497015 CDY2AQ9Y6F7 541 aa11.26□□□□□ -0.61
SRSF4-205ENST00000497015 MBLAC1A4D2B0 266 aaPredicted RBP11.25□□□□□ -0.61
SRSF4-205ENST00000497015 PRC1O43663 620 aa11.25□□□□□ -0.61
SRSF4-205ENST00000497015 DDAH1O94760 285 aa11.25□□□□□ -0.61
SRSF4-205ENST00000497015 WEE2P0C1S8 567 aa11.25□□□□□ -0.61
SRSF4-205ENST00000497015 CALM1P0DP23 149 aa11.25□□□□□ -0.61
SRSF4-205ENST00000497015 CALM2P0DP24 149 aa11.25□□□□□ -0.61
SRSF4-205ENST00000497015 CALM3P0DP25 149 aa11.25□□□□□ -0.61
SRSF4-205ENST00000497015 SMARCA1P28370 1054 aa11.25□□□□□ -0.61
SRSF4-205ENST00000497015 TRAF1Q13077 416 aa11.25□□□□□ -0.61
SRSF4-205ENST00000497015 ANGPT1Q15389 498 aa11.25□□□□□ -0.61
SRSF4-205ENST00000497015 FAM102BQ5T8I3 360 aa11.25□□□□□ -0.61
SRSF4-205ENST00000497015 MCTP2Q6DN12 878 aa11.25□□□□□ -0.61
SRSF4-205ENST00000497015 LLGL2Q6P1M3 1020 aa11.25□□□□□ -0.61
SRSF4-205ENST00000497015 TSHZ1Q6ZSZ6 1077 aa11.25□□□□□ -0.61
SRSF4-205ENST00000497015 CATIPQ7Z7H3 387 aa11.25□□□□□ -0.61
SRSF4-205ENST00000497015 SGMS1Q86VZ5 419 aa11.25□□□□□ -0.61
SRSF4-205ENST00000497015 STAG2Q8N3U4 1231 aa11.25□□□□□ -0.61
SRSF4-205ENST00000497015 DCLK2Q8N568 766 aa11.25□□□□□ -0.61
SRSF4-205ENST00000497015 MTMR8Q96EF0 704 aa11.25□□□□□ -0.61
SRSF4-205ENST00000497015 CDCA3Q99618 268 aaPredicted RBP11.25□□□□□ -0.61
SRSF4-205ENST00000497015 CWH43Q9H720 699 aa11.25□□□□□ -0.61
SRSF4-205ENST00000497015 RTEL1Q9NZ71 1219 aa11.25□□□□□ -0.61
SRSF4-205ENST00000497015 PADI3Q9ULW8 664 aa11.25□□□□□ -0.61
SRSF4-205ENST00000497015 TAF6LQ9Y6J9 622 aa11.25□□□□□ -0.61
SRSF4-205ENST00000497015 NRCAMQ92823 1304 aa11.25□□□□□ -0.61
SRSF4-205ENST00000497015 CACNA1BQ00975 2339 aa11.24□□□□□ -0.61
SRSF4-205ENST00000497015 PALM3A6NDB9 673 aaPredicted RBP11.24□□□□□ -0.61
SRSF4-205ENST00000497015 SH2B2O14492 632 aaPredicted RBP11.24□□□□□ -0.61
SRSF4-205ENST00000497015 MGEA5O60502 916 aa11.24□□□□□ -0.61
SRSF4-205ENST00000497015 PSMA5P28066 241 aa11.24□□□□□ -0.61
SRSF4-205ENST00000497015 RCAN1P53805 252 aa11.24□□□□□ -0.61
SRSF4-205ENST00000497015 UBE3AQ05086 875 aa11.24□□□□□ -0.61
SRSF4-205ENST00000497015 TROAPQ12815 778 aa11.24□□□□□ -0.61
SRSF4-205ENST00000497015 GRM4Q14833 912 aa11.24□□□□□ -0.61
SRSF4-205ENST00000497015 METTL7BQ6UX53 244 aa11.24□□□□□ -0.61
SRSF4-205ENST00000497015 DHX32Q7L7V1 743 aaKnown RBP11.24□□□□□ -0.61
SRSF4-205ENST00000497015 CCDC105Q8IYK2 499 aa11.24□□□□□ -0.61
SRSF4-205ENST00000497015 LY9Q9HBG7 655 aa11.24□□□□□ -0.61
SRSF4-205ENST00000497015 AAASQ9NRG9 546 aa11.24□□□□□ -0.61
SRSF4-205ENST00000497015 TYW1Q9NV66 732 aaKnown RBP11.24□□□□□ -0.61
SRSF4-205ENST00000497015 TMEM260Q9NX78 707 aa11.24□□□□□ -0.61
SRSF4-205ENST00000497015 BAZ2BQ9UIF8 2168 aaKnown RBP11.24□□□□□ -0.61
SRSF4-205ENST00000497015 CFAP47Q6ZTR5 3102 aa11.24□□□□□ -0.61
SRSF4-205ENST00000497015 NCOR2Q9Y618 2525 aa11.24□□□□□ -0.61
SRSF4-205ENST00000497015 GSTTP1A0A1W2PQM5 241 aa11.23□□□□□ -0.61
SRSF4-205ENST00000497015 ATP9AO75110 1047 aa11.23□□□□□ -0.61
SRSF4-205ENST00000497015 AOC1P19801 751 aa11.23□□□□□ -0.61
SRSF4-205ENST00000497015 KIF5BP33176 963 aa11.23□□□□□ -0.61
SRSF4-205ENST00000497015 GNAQP50148 359 aa11.23□□□□□ -0.61
SRSF4-205ENST00000497015 ANAPC15P60006 121 aa11.23□□□□□ -0.61
SRSF4-205ENST00000497015 EXOSC10Q01780 885 aaKnown RBP11.23□□□□□ -0.61
SRSF4-205ENST00000497015 PUM1Q14671 1186 aaKnown RBP eCLIP11.23□□□□□ -0.61
SRSF4-205ENST00000497015 PLPP4Q5VZY2 271 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms