RNA–Protein interactions for RNA: ENST00000496549.5

CRNKL1-205, Transcript of crooked neck pre-mRNA splicing factor 1, human

TSL 1 (best)

Gene CRNKL1, Length 4,093 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CRNKL1-205	ENST00000496549	VWA3B	Q502W6	1294 aa		8.8	□□□□□ -1
CRNKL1-205	ENST00000496549	LMOD2	Q6P5Q4	547 aa		8.8	□□□□□ -1
CRNKL1-205	ENST00000496549	OTUD6A	Q7L8S5	288 aa		8.8	□□□□□ -1
CRNKL1-205	ENST00000496549	COL23A1	Q86Y22	540 aa	Predicted RBP	8.8	□□□□□ -1
CRNKL1-205	ENST00000496549	UCMA	Q8WVF2	138 aa		8.8	□□□□□ -1
CRNKL1-205	ENST00000496549	STAM	Q92783	540 aa		8.8	□□□□□ -1
CRNKL1-205	ENST00000496549	HAUS8	Q9BT25	410 aa		8.8	□□□□□ -1
CRNKL1-205	ENST00000496549	GID8	Q9NWU2	228 aa		8.8	□□□□□ -1
CRNKL1-205	ENST00000496549	EHD2	Q9NZN4	543 aa		8.8	□□□□□ -1
CRNKL1-205	ENST00000496549	PPP1R1B	Q9UD71	204 aa	Predicted RBP	8.8	□□□□□ -1
CRNKL1-205	ENST00000496549	HTR3E	A5X5Y0	456 aa		8.8	□□□□□ -1
CRNKL1-205	ENST00000496549	COBL	O75128	1261 aa		8.8	□□□□□ -1
CRNKL1-205	ENST00000496549	GMNN	O75496	209 aa		8.8	□□□□□ -1
CRNKL1-205	ENST00000496549	HAUS5	O94927	633 aa		8.8	□□□□□ -1
CRNKL1-205	ENST00000496549	CLPTM1	O96005	669 aa		8.8	□□□□□ -1
CRNKL1-205	ENST00000496549	ABL1	P00519	1130 aa		8.8	□□□□□ -1
CRNKL1-205	ENST00000496549	SERPINB6	P35237	376 aa		8.8	□□□□□ -1
CRNKL1-205	ENST00000496549	KRT81	Q14533	505 aa		8.8	□□□□□ -1
CRNKL1-205	ENST00000496549	ZNF662	Q6ZS27	426 aa		8.8	□□□□□ -1
CRNKL1-205	ENST00000496549	RIC3	Q7Z5B4	369 aa		8.8	□□□□□ -1
CRNKL1-205	ENST00000496549	CCDC82	Q8N4S0	544 aa		8.8	□□□□□ -1
CRNKL1-205	ENST00000496549	SYT2	Q8N9I0	419 aa	Predicted RBP	8.8	□□□□□ -1
CRNKL1-205	ENST00000496549	ICA1L	Q8NDH6	482 aa		8.8	□□□□□ -1
CRNKL1-205	ENST00000496549	AP1M1	Q9BXS5	423 aa		8.8	□□□□□ -1
CRNKL1-205	ENST00000496549	NUF2	Q9BZD4	464 aa		8.8	□□□□□ -1
CRNKL1-205	ENST00000496549	BLZF1	Q9H2G9	400 aa		8.8	□□□□□ -1
CRNKL1-205	ENST00000496549	GPC6	Q9Y625	555 aa	Predicted RBP	8.8	□□□□□ -1
CRNKL1-205	ENST00000496549	PI4KAP2	A4QPH2	592 aa		8.79	□□□□□ -1
CRNKL1-205	ENST00000496549	GTPBP6	O43824	516 aa	Predicted RBP	8.79	□□□□□ -1
CRNKL1-205	ENST00000496549	RANBP6	O60518	1105 aa	Known RBP	8.79	□□□□□ -1
CRNKL1-205	ENST00000496549	LYN	P07948	512 aa		8.79	□□□□□ -1
CRNKL1-205	ENST00000496549	LMNB1	P20700	586 aa		8.79	□□□□□ -1
CRNKL1-205	ENST00000496549	CDC27	P30260	824 aa		8.79	□□□□□ -1
CRNKL1-205	ENST00000496549	RAPGEF1	Q13905	1077 aa		8.79	□□□□□ -1
CRNKL1-205	ENST00000496549	SPRED3	Q2MJR0	410 aa		8.79	□□□□□ -1
CRNKL1-205	ENST00000496549	TMEM67	Q5HYA8	995 aa		8.79	□□□□□ -1
CRNKL1-205	ENST00000496549	NLRP9	Q7RTR0	991 aa		8.79	□□□□□ -1
CRNKL1-205	ENST00000496549	KIAA2013	Q8IYS2	634 aa		8.79	□□□□□ -1
CRNKL1-205	ENST00000496549	PI4KAP1	Q8N8J0	262 aa		8.79	□□□□□ -1
CRNKL1-205	ENST00000496549	FAM161B	Q96MY7	647 aa		8.79	□□□□□ -1
CRNKL1-205	ENST00000496549	DNAJC7	Q99615	494 aa		8.79	□□□□□ -1
CRNKL1-205	ENST00000496549	DDX50	Q9BQ39	737 aa	Known RBP	8.79	□□□□□ -1
CRNKL1-205	ENST00000496549	ZSCAN5C	A6NGD5	496 aa	Predicted RBP	8.79	□□□□□ -1
CRNKL1-205	ENST00000496549	OCM2	P0CE71	109 aa		8.79	□□□□□ -1
CRNKL1-205	ENST00000496549	OCM	P0CE72	109 aa	Predicted RBP	8.79	□□□□□ -1
CRNKL1-205	ENST00000496549	HDAC4	P56524	1084 aa		8.79	□□□□□ -1
CRNKL1-205	ENST00000496549	GRIN1	Q05586	938 aa		8.79	□□□□□ -1
CRNKL1-205	ENST00000496549	LSAMP	Q13449	338 aa		8.79	□□□□□ -1
CRNKL1-205	ENST00000496549	PROSER2	Q86WR7	435 aa	Predicted RBP	8.79	□□□□□ -1
CRNKL1-205	ENST00000496549	PASD1	Q8IV76	773 aa		8.79	□□□□□ -1
CRNKL1-205	ENST00000496549	DDI1	Q8WTU0	396 aa		8.79	□□□□□ -1
CRNKL1-205	ENST00000496549	NLRP3	Q96P20	1036 aa		8.79	□□□□□ -1
CRNKL1-205	ENST00000496549	PLVAP	Q9BX97	442 aa		8.79	□□□□□ -1
CRNKL1-205	ENST00000496549	CRNKL1	Q9BZJ0	848 aa	Known RBP	8.79	□□□□□ -1
CRNKL1-205	ENST00000496549	DDX47	Q9H0S4	455 aa	Known RBP	8.79	□□□□□ -1
CRNKL1-205	ENST00000496549	HSD3B7	Q9H2F3	369 aa		8.79	□□□□□ -1
CRNKL1-205	ENST00000496549	MLXIPL	Q9NP71	852 aa		8.79	□□□□□ -1
CRNKL1-205	ENST00000496549	CABP5	Q9NP86	173 aa		8.79	□□□□□ -1
CRNKL1-205	ENST00000496549	METTL5	Q9NRN9	209 aa	Known RBP	8.79	□□□□□ -1
CRNKL1-205	ENST00000496549	SEPT11	Q9NVA2	429 aa	Known RBP	8.79	□□□□□ -1
CRNKL1-205	ENST00000496549	TLR7	Q9NYK1	1049 aa	Known RBP	8.79	□□□□□ -1
CRNKL1-205	ENST00000496549	AIPL1	Q9NZN9	384 aa		8.79	□□□□□ -1
CRNKL1-205	ENST00000496549	CAPN6	Q9Y6Q1	641 aa		8.79	□□□□□ -1
CRNKL1-205	ENST00000496549	ARHGEF10	O15013	1369 aa		8.79	□□□□□ -1
CRNKL1-205	ENST00000496549	ADGRB2	O60241	1585 aa		8.79	□□□□□ -1
CRNKL1-205	ENST00000496549	CYTH3	O43739	400 aa		8.79	□□□□□ -1
CRNKL1-205	ENST00000496549	BRAF	P15056	766 aa		8.79	□□□□□ -1
CRNKL1-205	ENST00000496549	PTPRE	P23469	700 aa		8.79	□□□□□ -1
CRNKL1-205	ENST00000496549	PTPN4	P29074	926 aa		8.79	□□□□□ -1
CRNKL1-205	ENST00000496549	ACADVL	P49748	655 aa		8.79	□□□□□ -1
CRNKL1-205	ENST00000496549	RAB15	P59190	212 aa		8.79	□□□□□ -1
CRNKL1-205	ENST00000496549	OCRL	Q01968	901 aa		8.79	□□□□□ -1
CRNKL1-205	ENST00000496549	KLHL30	Q0D2K2	578 aa		8.79	□□□□□ -1
CRNKL1-205	ENST00000496549	KRT26	Q7Z3Y9	468 aa		8.79	□□□□□ -1
CRNKL1-205	ENST00000496549	DEPTOR	Q8TB45	409 aa		8.79	□□□□□ -1
CRNKL1-205	ENST00000496549	CFAP57	Q96MR6	1250 aa		8.79	□□□□□ -1
CRNKL1-205	ENST00000496549	LBHD1	Q9BQE6	289 aa	Predicted RBP	8.79	□□□□□ -1
CRNKL1-205	ENST00000496549	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	8.79	□□□□□ -1
CRNKL1-205	ENST00000496549	DDX25	Q9UHL0	483 aa	Known RBP	8.79	□□□□□ -1
CRNKL1-205	ENST00000496549	AGAP1	Q9UPQ3	857 aa		8.79	□□□□□ -1
CRNKL1-205	ENST00000496549	FER1L4	A9Z1Z3	1794 aa		8.78	□□□□□ -1
CRNKL1-205	ENST00000496549	TRPA1	O75762	1119 aa		8.78	□□□□□ -1
CRNKL1-205	ENST00000496549	FAM163B	P0C2L3	166 aa		8.78	□□□□□ -1
CRNKL1-205	ENST00000496549	POR	P16435	677 aa	Predicted RBP	8.78	□□□□□ -1
CRNKL1-205	ENST00000496549	ALDH1B1	P30837	517 aa		8.78	□□□□□ -1
CRNKL1-205	ENST00000496549	PLCB3	Q01970	1234 aa		8.78	□□□□□ -1
CRNKL1-205	ENST00000496549	C16orf72	Q14CZ0	275 aa		8.78	□□□□□ -1
CRNKL1-205	ENST00000496549	ZNF658	Q5TYW1	1059 aa	Predicted RBP	8.78	□□□□□ -1
CRNKL1-205	ENST00000496549	PIGW	Q7Z7B1	504 aa		8.78	□□□□□ -1
CRNKL1-205	ENST00000496549	ZNF579	Q8NAF0	562 aa	Known RBP	8.78	□□□□□ -1
CRNKL1-205	ENST00000496549	SNX29	Q8TEQ0	813 aa		8.78	□□□□□ -1
CRNKL1-205	ENST00000496549	SH3TC2	Q8TF17	1288 aa		8.78	□□□□□ -1
CRNKL1-205	ENST00000496549	THAP11	Q96EK4	314 aa		8.78	□□□□□ -1
CRNKL1-205	ENST00000496549	ZNF333	Q96JL9	665 aa		8.78	□□□□□ -1
CRNKL1-205	ENST00000496549	CCDC138	Q96M89	665 aa		8.78	□□□□□ -1
CRNKL1-205	ENST00000496549	AGAP3	Q96P47	875 aa		8.78	□□□□□ -1
CRNKL1-205	ENST00000496549	AMFR	Q9UKV5	643 aa		8.78	□□□□□ -1
CRNKL1-205	ENST00000496549	TRIM64C	A6NLI5	447 aa		8.78	□□□□□ -1
CRNKL1-205	ENST00000496549	KRT15	P19012	456 aa		8.78	□□□□□ -1
CRNKL1-205	ENST00000496549	EPHB2	P29323	1055 aa		8.78	□□□□□ -1

Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms