RNA–Protein interactions for RNA: ENST00000496197.5

PTPN7-218, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,463 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-218ENST00000496197 DHX58Q96C10 678 aa15.08■□□□□ 0
PTPN7-218ENST00000496197 CALML4Q96GE6 196 aa15.08■□□□□ 0
PTPN7-218ENST00000496197 NIFKQ9BYG3 293 aaKnown RBP15.08■□□□□ 0
PTPN7-218ENST00000496197 BHMT2Q9H2M3 363 aa15.08■□□□□ 0
PTPN7-218ENST00000496197 BMP2KQ9NSY1 1161 aaPredicted RBP15.08■□□□□ 0
PTPN7-218ENST00000496197 KCNH3Q9ULD8 1083 aa15.08■□□□□ 0
PTPN7-218ENST00000496197 STK24Q9Y6E0 443 aa15.08■□□□□ 0
PTPN7-218ENST00000496197 CCDC85CA6NKD9 419 aa15.07■□□□□ 0
PTPN7-218ENST00000496197 HBP1O60381 514 aa15.07■□□□□ 0
PTPN7-218ENST00000496197 CABYRO75952 493 aa15.07■□□□□ 0
PTPN7-218ENST00000496197 TXLNAP40222 546 aa15.07■□□□□ 0
PTPN7-218ENST00000496197 ATN1P54259 1190 aaPredicted RBP15.07■□□□□ 0
PTPN7-218ENST00000496197 MCM6Q14566 821 aa15.07■□□□□ 0
PTPN7-218ENST00000496197 GRIK4Q16099 956 aa15.07■□□□□ 0
PTPN7-218ENST00000496197 CSPP1Q1MSJ5 1256 aa15.07■□□□□ 0
PTPN7-218ENST00000496197 RASSF8Q8NHQ8 419 aa15.07■□□□□ 0
PTPN7-218ENST00000496197 VTI1AQ96AJ9 217 aa15.07■□□□□ 0
PTPN7-218ENST00000496197 CDK5RAP3Q96JB5 506 aa15.07■□□□□ 0
PTPN7-218ENST00000496197 MTRQ99707 1265 aa15.07■□□□□ 0
PTPN7-218ENST00000496197 NT5C3AQ9H0P0 336 aa15.07■□□□□ 0
PTPN7-218ENST00000496197 C11orf49Q9H6J7 331 aa15.07■□□□□ 0
PTPN7-218ENST00000496197 CYP26B1Q9NR63 512 aa15.07■□□□□ 0
PTPN7-218ENST00000496197 FAM13BQ9NYF5 915 aa15.07■□□□□ 0
PTPN7-218ENST00000496197 GTF2IRD1Q9UHL9 959 aa15.07■□□□□ 0
PTPN7-218ENST00000496197 A0A0U1RQG5 324 aaPredicted RBP15.06■□□□□ 0
PTPN7-218ENST00000496197 ACTN4O43707 911 aaKnown RBP15.06■□□□□ 0
PTPN7-218ENST00000496197 NR1I2O75469 434 aa15.06■□□□□ 0
PTPN7-218ENST00000496197 EYA4O95677 639 aa15.06■□□□□ 0
PTPN7-218ENST00000496197 MCM4P33991 863 aa15.06■□□□□ 0
PTPN7-218ENST00000496197 CDK7P50613 346 aa15.06■□□□□ 0
PTPN7-218ENST00000496197 SLC12A3P55017 1021 aa15.06■□□□□ 0
PTPN7-218ENST00000496197 UBE2HP62256 183 aa15.06■□□□□ 0
PTPN7-218ENST00000496197 PPFIA1Q13136 1202 aa15.06■□□□□ 0
PTPN7-218ENST00000496197 LONRF3Q496Y0 759 aa15.06■□□□□ 0
PTPN7-218ENST00000496197 XKR9Q5GH70 373 aa15.06■□□□□ 0
PTPN7-218ENST00000496197 FAM47CQ5HY64 1035 aa15.06■□□□□ 0
PTPN7-218ENST00000496197 RRAGBQ5VZM2 374 aa15.06■□□□□ 0
PTPN7-218ENST00000496197 SLC39A5Q6ZMH5 540 aa15.06■□□□□ 0
PTPN7-218ENST00000496197 SESTD1Q86VW0 696 aa15.06■□□□□ 0
PTPN7-218ENST00000496197 FMR1NBQ8N0W7 255 aaPredicted RBP15.06■□□□□ 0
PTPN7-218ENST00000496197 RAD54LQ92698 747 aa15.06■□□□□ 0
PTPN7-218ENST00000496197 STAMQ92783 540 aa15.06■□□□□ 0
PTPN7-218ENST00000496197 WNT8BQ93098 351 aa15.06■□□□□ 0
PTPN7-218ENST00000496197 FAM167AQ96KS9 214 aa15.06■□□□□ 0
PTPN7-218ENST00000496197 CEP170P1Q96L14 293 aa15.06■□□□□ 0
PTPN7-218ENST00000496197 NACC1Q96RE7 527 aa15.06■□□□□ 0
PTPN7-218ENST00000496197 ANKEF1Q9NU02 776 aa15.06■□□□□ 0
PTPN7-218ENST00000496197 TRMT13Q9NUP7 481 aaKnown RBP15.06■□□□□ 0
PTPN7-218ENST00000496197 PCDH10Q9P2E7 1040 aa15.06■□□□□ 0
PTPN7-218ENST00000496197 CCDC39Q9UFE4 941 aa15.06■□□□□ 0
PTPN7-218ENST00000496197 SERTAD1Q9UHV2 236 aa15.06■□□□□ 0
PTPN7-218ENST00000496197 DBR1Q9UK59 544 aaKnown RBP15.06■□□□□ 0
PTPN7-218ENST00000496197 GOLGA6L4A6NEF3 574 aa15.05■□□□□ -0
PTPN7-218ENST00000496197 ARVCFO00192 962 aa15.05■□□□□ -0
PTPN7-218ENST00000496197 TREHO43280 583 aa15.05■□□□□ -0
PTPN7-218ENST00000496197 SLC26A4O43511 780 aa15.05■□□□□ -0
PTPN7-218ENST00000496197 DKC1O60832 514 aaKnown RBP eCLIP15.05■□□□□ -0
PTPN7-218ENST00000496197 C22orf31O95567 290 aa15.05■□□□□ -0
PTPN7-218ENST00000496197 PLA2G4BP0C869 781 aa15.05■□□□□ -0
PTPN7-218ENST00000496197 STAT6P42226 847 aa15.05■□□□□ -0
PTPN7-218ENST00000496197 DRP2Q13474 957 aa15.05■□□□□ -0
PTPN7-218ENST00000496197 DHX8Q14562 1220 aaKnown RBP15.05■□□□□ -0
PTPN7-218ENST00000496197 SNX17Q15036 470 aa15.05■□□□□ -0
PTPN7-218ENST00000496197 LRRC26Q2I0M4 334 aa15.05■□□□□ -0
PTPN7-218ENST00000496197 NFRKBQ6P4R8 1299 aa15.05■□□□□ -0
PTPN7-218ENST00000496197 RUFY4Q6ZNE9 571 aa15.05■□□□□ -0
PTPN7-218ENST00000496197 GRAMD1CQ8IYS0 662 aa15.05■□□□□ -0
PTPN7-218ENST00000496197 C7orf31Q8N865 590 aa15.05■□□□□ -0
PTPN7-218ENST00000496197 GPT2Q8TD30 523 aa15.05■□□□□ -0
PTPN7-218ENST00000496197 LARP4BQ92615 738 aaKnown RBP15.05■□□□□ -0
PTPN7-218ENST00000496197 RUSC1Q9BVN2 902 aa15.05■□□□□ -0
PTPN7-218ENST00000496197 POLD4Q9HCU8 107 aa15.05■□□□□ -0
PTPN7-218ENST00000496197 XPNPEP1Q9NQW7 623 aa15.05■□□□□ -0
PTPN7-218ENST00000496197 NRBP2Q9NSY0 501 aa15.05■□□□□ -0
PTPN7-218ENST00000496197 DNM3Q9UQ16 869 aa15.05■□□□□ -0
PTPN7-218ENST00000496197 COL1A2P08123 1366 aa15.04■□□□□ -0
PTPN7-218ENST00000496197 NPHP3-ACAD11A0A0J9YXS1 232 aa15.04■□□□□ -0
PTPN7-218ENST00000496197 C17orf102A2RUQ5 167 aa15.04■□□□□ -0
PTPN7-218ENST00000496197 MBLAC1A4D2B0 266 aaPredicted RBP15.04■□□□□ -0
PTPN7-218ENST00000496197 B4GALT4O60513 344 aa15.04■□□□□ -0
PTPN7-218ENST00000496197 USO1O60763 962 aaKnown RBP15.04■□□□□ -0
PTPN7-218ENST00000496197 ZNF202O95125 648 aa15.04■□□□□ -0
PTPN7-218ENST00000496197 CASP1P29466 404 aa15.04■□□□□ -0
PTPN7-218ENST00000496197 SYKP43405 635 aa15.04■□□□□ -0
PTPN7-218ENST00000496197 MKRN4PQ13434 485 aaPredicted RBP15.04■□□□□ -0
PTPN7-218ENST00000496197 ARSHQ5FYA8 562 aa15.04■□□□□ -0
PTPN7-218ENST00000496197 MTHFD1LQ6UB35 978 aa15.04■□□□□ -0
PTPN7-218ENST00000496197 CCDC73Q6ZRK6 1079 aa15.04■□□□□ -0
PTPN7-218ENST00000496197 FAM126BQ8IXS8 530 aa15.04■□□□□ -0
PTPN7-218ENST00000496197 SYT2Q8N9I0 419 aaPredicted RBP15.04■□□□□ -0
PTPN7-218ENST00000496197 TRPV6Q9H1D0 765 aa15.04■□□□□ -0
PTPN7-218ENST00000496197 PDLIM7Q9NR12 457 aa15.04■□□□□ -0
PTPN7-218ENST00000496197 STK17AQ9UEE5 414 aa15.04■□□□□ -0
PTPN7-218ENST00000496197 NRCAMQ92823 1304 aa15.04■□□□□ -0
PTPN7-218ENST00000496197 SSBP05455 408 aaKnown RBP eCLIP15.03■□□□□ -0
PTPN7-218ENST00000496197 XRCC6P12956 609 aaKnown RBP eCLIP15.03■□□□□ -0
PTPN7-218ENST00000496197 CYP11B2P19099 503 aa15.03■□□□□ -0
PTPN7-218ENST00000496197 KLRC1P26715 233 aa15.03■□□□□ -0
PTPN7-218ENST00000496197 FAM160A1Q05DH4 1040 aa15.03■□□□□ -0
PTPN7-218ENST00000496197 RAD51AP2Q09MP3 1159 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms