RNA–Protein interactions for RNA: ENST00000495677.1

COL1A1-209, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 594 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-209ENST00000495677 DENND4AQ7Z401 1863 aa15.41■□□□□ 0.06
COL1A1-209ENST00000495677 NFASCO94856 1347 aa15.41■□□□□ 0.06
COL1A1-209ENST00000495677 TBKBP1A7MCY6 615 aa15.4■□□□□ 0.06
COL1A1-209ENST00000495677 GPR182O15218 404 aa15.4■□□□□ 0.06
COL1A1-209ENST00000495677 MGEA5O60502 916 aa15.4■□□□□ 0.06
COL1A1-209ENST00000495677 STAT5BP51692 787 aa15.4■□□□□ 0.06
COL1A1-209ENST00000495677 CLCN5P51795 746 aa15.4■□□□□ 0.06
COL1A1-209ENST00000495677 ITIH3Q06033 890 aa15.4■□□□□ 0.06
COL1A1-209ENST00000495677 TMEM62Q0P6H9 643 aa15.4■□□□□ 0.06
COL1A1-209ENST00000495677 NFX1Q12986 1120 aaKnown RBP15.4■□□□□ 0.06
COL1A1-209ENST00000495677 SART3Q15020 963 aaKnown RBP15.4■□□□□ 0.06
COL1A1-209ENST00000495677 TPRNQ4KMQ1 711 aa15.4■□□□□ 0.06
COL1A1-209ENST00000495677 MTHFD1LQ6UB35 978 aa15.4■□□□□ 0.06
COL1A1-209ENST00000495677 CATIPQ7Z7H3 387 aa15.4■□□□□ 0.06
COL1A1-209ENST00000495677 ZBTB33Q86T24 672 aa15.4■□□□□ 0.06
COL1A1-209ENST00000495677 TMEM105Q8N8V8 129 aa15.4■□□□□ 0.06
COL1A1-209ENST00000495677 IGDCC4Q8TDY8 1250 aa15.4■□□□□ 0.06
COL1A1-209ENST00000495677 ADAM2Q99965 735 aa15.4■□□□□ 0.06
COL1A1-209ENST00000495677 LZTS2Q9BRK4 669 aa15.4■□□□□ 0.06
COL1A1-209ENST00000495677 ADAM7Q9H2U9 754 aa15.4■□□□□ 0.06
COL1A1-209ENST00000495677 PSTPIP2Q9H939 334 aa15.4■□□□□ 0.06
COL1A1-209ENST00000495677 JPH1Q9HDC5 661 aaPredicted RBP15.4■□□□□ 0.06
COL1A1-209ENST00000495677 TMEM161AQ9NX61 479 aa15.4■□□□□ 0.06
COL1A1-209ENST00000495677 SLC9A2Q9UBY0 812 aa15.4■□□□□ 0.06
COL1A1-209ENST00000495677 U3KPZ7 1027 aaPredicted RBP15.4■□□□□ 0.06
COL1A1-209ENST00000495677 FANCMQ8IYD8 2048 aa15.39■□□□□ 0.05
COL1A1-209ENST00000495677 RPS6KA5O75582 802 aa15.39■□□□□ 0.05
COL1A1-209ENST00000495677 BRD1O95696 1058 aa15.39■□□□□ 0.05
COL1A1-209ENST00000495677 CYP21A2P08686 494 aa15.39■□□□□ 0.05
COL1A1-209ENST00000495677 AAMPQ13685 434 aa15.39■□□□□ 0.05
COL1A1-209ENST00000495677 TMEM266Q2M3C6 531 aa15.39■□□□□ 0.05
COL1A1-209ENST00000495677 MCTP2Q6DN12 878 aa15.39■□□□□ 0.05
COL1A1-209ENST00000495677 ASTLQ6HA08 431 aaPredicted RBP15.39■□□□□ 0.05
COL1A1-209ENST00000495677 CASP10Q92851 521 aa15.39■□□□□ 0.05
COL1A1-209ENST00000495677 MTA3Q9BTC8 594 aa15.39■□□□□ 0.05
COL1A1-209ENST00000495677 NOC2LQ9Y3T9 749 aaKnown RBP15.39■□□□□ 0.05
COL1A1-209ENST00000495677 IGKV6D-21A0A0A0MT36 114 aa15.38■□□□□ 0.05
COL1A1-209ENST00000495677 DENND3A2RUS2 1198 aa15.38■□□□□ 0.05
COL1A1-209ENST00000495677 HBP1O60381 514 aa15.38■□□□□ 0.05
COL1A1-209ENST00000495677 KLRC1P26715 233 aa15.38■□□□□ 0.05
COL1A1-209ENST00000495677 KIF5BP33176 963 aa15.38■□□□□ 0.05
COL1A1-209ENST00000495677 GNAQP50148 359 aa15.38■□□□□ 0.05
COL1A1-209ENST00000495677 PLPP4Q5VZY2 271 aa15.38■□□□□ 0.05
COL1A1-209ENST00000495677 CES5AQ6NT32 575 aa15.38■□□□□ 0.05
COL1A1-209ENST00000495677 CHD1LQ86WJ1 897 aa15.38■□□□□ 0.05
COL1A1-209ENST00000495677 TEX2Q8IWB9 1127 aa15.38■□□□□ 0.05
COL1A1-209ENST00000495677 KIAA0319LQ8IZA0 1049 aa15.38■□□□□ 0.05
COL1A1-209ENST00000495677 ZDHHC14Q8IZN3 488 aa15.38■□□□□ 0.05
COL1A1-209ENST00000495677 NCOA7Q8NI08 942 aa15.38■□□□□ 0.05
COL1A1-209ENST00000495677 TRAPPC12Q8WVT3 735 aa15.38■□□□□ 0.05
COL1A1-209ENST00000495677 NKD2Q969F2 451 aaPredicted RBP15.38■□□□□ 0.05
COL1A1-209ENST00000495677 TCF25Q9BQ70 676 aa15.38■□□□□ 0.05
COL1A1-209ENST00000495677 TMEM117Q9H0C3 514 aa15.38■□□□□ 0.05
COL1A1-209ENST00000495677 IL25Q9H293 177 aa15.38■□□□□ 0.05
COL1A1-209ENST00000495677 POMKQ9H5K3 350 aa15.38■□□□□ 0.05
COL1A1-209ENST00000495677 CDHR5Q9HBB8 845 aa15.38■□□□□ 0.05
COL1A1-209ENST00000495677 ATP6V0A4Q9HBG4 840 aa15.38■□□□□ 0.05
COL1A1-209ENST00000495677 KCNH7Q9NS40 1196 aa15.38■□□□□ 0.05
COL1A1-209ENST00000495677 SEC63Q9UGP8 760 aaKnown RBP15.38■□□□□ 0.05
COL1A1-209ENST00000495677 ST3GAL5Q9UNP4 418 aa15.38■□□□□ 0.05
COL1A1-209ENST00000495677 COL1A2P08123 1366 aa15.37■□□□□ 0.05
COL1A1-209ENST00000495677 C2orf16Q68DN1 1984 aa15.37■□□□□ 0.05
COL1A1-209ENST00000495677 HIDE1A8MVS5 230 aa15.37■□□□□ 0.05
COL1A1-209ENST00000495677 PDE4AP27815 886 aa15.37■□□□□ 0.05
COL1A1-209ENST00000495677 PPM1AP35813 382 aa15.37■□□□□ 0.05
COL1A1-209ENST00000495677 MTHFRP42898 656 aa15.37■□□□□ 0.05
COL1A1-209ENST00000495677 ID4P47928 161 aa15.37■□□□□ 0.05
COL1A1-209ENST00000495677 ACTR2P61160 394 aa15.37■□□□□ 0.05
COL1A1-209ENST00000495677 KRT17Q04695 432 aa15.37■□□□□ 0.05
COL1A1-209ENST00000495677 DSC3Q14574 896 aa15.37■□□□□ 0.05
COL1A1-209ENST00000495677 KCNT2Q6UVM3 1135 aa15.37■□□□□ 0.05
COL1A1-209ENST00000495677 PLCD3Q8N3E9 789 aa15.37■□□□□ 0.05
COL1A1-209ENST00000495677 MRPL43Q8N983 215 aaKnown RBP15.37■□□□□ 0.05
COL1A1-209ENST00000495677 CTCFLQ8NI51 663 aaPredicted RBP15.37■□□□□ 0.05
COL1A1-209ENST00000495677 TMEM40Q8WWA1 233 aa15.37■□□□□ 0.05
COL1A1-209ENST00000495677 PIBF1Q8WXW3 757 aa15.37■□□□□ 0.05
COL1A1-209ENST00000495677 MXRA8Q9BRK3 442 aa15.37■□□□□ 0.05
COL1A1-209ENST00000495677 PCDHA6Q9UN73 950 aa15.37■□□□□ 0.05
COL1A1-209ENST00000495677 USTQ9Y2C2 406 aa15.37■□□□□ 0.05
COL1A1-209ENST00000495677 PCDHA8Q9Y5H6 950 aa15.37■□□□□ 0.05
COL1A1-209ENST00000495677 GVINP1Q7Z2Y8 2422 aa15.36■□□□□ 0.05
COL1A1-209ENST00000495677 SPDYE3A6NKU9 549 aa15.36■□□□□ 0.05
COL1A1-209ENST00000495677 C2CD4DB7Z1M9 353 aa15.36■□□□□ 0.05
COL1A1-209ENST00000495677 HOXA2O43364 376 aa15.36■□□□□ 0.05
COL1A1-209ENST00000495677 DDAH1O94760 285 aa15.36■□□□□ 0.05
COL1A1-209ENST00000495677 CRYBB1P53674 252 aaPredicted RBP15.36■□□□□ 0.05
COL1A1-209ENST00000495677 NUCB1Q02818 461 aa15.36■□□□□ 0.05
COL1A1-209ENST00000495677 LRRC55Q6ZSA7 311 aa15.36■□□□□ 0.05
COL1A1-209ENST00000495677 TMC7Q7Z402 723 aa15.36■□□□□ 0.05
COL1A1-209ENST00000495677 RALYLQ86SE5 291 aaKnown RBP15.36■□□□□ 0.05
COL1A1-209ENST00000495677 CASD1Q96PB1 797 aa15.36■□□□□ 0.05
COL1A1-209ENST00000495677 SDF4Q9BRK5 362 aa15.36■□□□□ 0.05
COL1A1-209ENST00000495677 ENTPD7Q9NQZ7 604 aa15.36■□□□□ 0.05
COL1A1-209ENST00000495677 HCSTQ9UBK5 93 aa15.36■□□□□ 0.05
COL1A1-209ENST00000495677 HCFC2Q9Y5Z7 792 aa15.36■□□□□ 0.05
COL1A1-209ENST00000495677 CACNA1AO00555 2505 aa15.36■□□□□ 0.05
COL1A1-209ENST00000495677 E7EWF7 191 aa15.35■□□□□ 0.05
COL1A1-209ENST00000495677 ANTXR2P58335 489 aa15.35■□□□□ 0.05
COL1A1-209ENST00000495677 APOBRQ0VD83 1088 aa15.35■□□□□ 0.05
COL1A1-209ENST00000495677 ZNF484Q5JVG2 852 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms