RNA–Protein interactions for RNA: ENST00000494458.1

MSH5-217, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 520 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-217ENST00000494458 KLHL10Q6JEL2 608 aa7.53□□□□□ -1.2
MSH5-217ENST00000494458 ARMCX5Q6P1M9 558 aa7.53□□□□□ -1.2
MSH5-217ENST00000494458 ANO5Q75V66 913 aa7.53□□□□□ -1.2
MSH5-217ENST00000494458 NCAPG2Q86XI2 1143 aa7.53□□□□□ -1.2
MSH5-217ENST00000494458 TMEM139Q8IV31 216 aa7.53□□□□□ -1.2
MSH5-217ENST00000494458 GLIS3Q8NEA6 775 aa7.53□□□□□ -1.2
MSH5-217ENST00000494458 AFAP1L1Q8TED9 768 aa7.53□□□□□ -1.2
MSH5-217ENST00000494458 CEP63Q96MT8 703 aa7.53□□□□□ -1.2
MSH5-217ENST00000494458 SRRTQ9BXP5 876 aaKnown RBP7.53□□□□□ -1.2
MSH5-217ENST00000494458 NIFKQ9BYG3 293 aaKnown RBP7.53□□□□□ -1.2
MSH5-217ENST00000494458 KATNBL1Q9H079 304 aa7.53□□□□□ -1.2
MSH5-217ENST00000494458 PORCNQ9H237 461 aa7.53□□□□□ -1.2
MSH5-217ENST00000494458 JPH1Q9HDC5 661 aaPredicted RBP7.53□□□□□ -1.2
MSH5-217ENST00000494458 SPTLC3Q9NUV7 552 aa7.53□□□□□ -1.2
MSH5-217ENST00000494458 DMAC2Q9NW81 257 aa7.53□□□□□ -1.2
MSH5-217ENST00000494458 SLC9A2Q9UBY0 812 aa7.53□□□□□ -1.2
MSH5-217ENST00000494458 DDX41Q9UJV9 622 aaKnown RBP7.53□□□□□ -1.2
MSH5-217ENST00000494458 PCDHB8Q9UN66 801 aa7.53□□□□□ -1.2
MSH5-217ENST00000494458 MAPK8IP1Q9UQF2 711 aa7.53□□□□□ -1.2
MSH5-217ENST00000494458 PPME1Q9Y570 386 aa7.53□□□□□ -1.2
MSH5-217ENST00000494458 UBE4BO95155 1302 aa7.52□□□□□ -1.2
MSH5-217ENST00000494458 GSTTP1A0A1W2PQM5 241 aa7.52□□□□□ -1.21
MSH5-217ENST00000494458 MANSC4A6NHS7 340 aaPredicted RBP7.52□□□□□ -1.21
MSH5-217ENST00000494458 ASB14A6NK59 587 aa7.52□□□□□ -1.21
MSH5-217ENST00000494458 LGALS16A8MUM7 142 aa7.52□□□□□ -1.21
MSH5-217ENST00000494458 FAM155AB1AL88 458 aaPredicted RBP7.52□□□□□ -1.21
MSH5-217ENST00000494458 RSPH10B2B2RC85 870 aa7.52□□□□□ -1.21
MSH5-217ENST00000494458 TGFB1I1O43294 461 aa7.52□□□□□ -1.21
MSH5-217ENST00000494458 CHMP2AO43633 222 aa7.52□□□□□ -1.21
MSH5-217ENST00000494458 COBLO75128 1261 aa7.52□□□□□ -1.21
MSH5-217ENST00000494458 LGR5O75473 907 aa7.52□□□□□ -1.21
MSH5-217ENST00000494458 FARP2O94887 1054 aaPredicted RBP7.52□□□□□ -1.21
MSH5-217ENST00000494458 FGFR1OPO95684 399 aaKnown RBP7.52□□□□□ -1.21
MSH5-217ENST00000494458 SERPINC1P01008 464 aa7.52□□□□□ -1.21
MSH5-217ENST00000494458 PSAPP07602 524 aa7.52□□□□□ -1.21
MSH5-217ENST00000494458 HOXC6P09630 235 aa7.52□□□□□ -1.21
MSH5-217ENST00000494458 SUPT20HL2P0C7V6 817 aa7.52□□□□□ -1.21
MSH5-217ENST00000494458 RSPH10BP0C881 870 aa7.52□□□□□ -1.21
MSH5-217ENST00000494458 IDEP14735 1019 aa7.52□□□□□ -1.21
MSH5-217ENST00000494458 CDK11BP21127 795 aaKnown RBP7.52□□□□□ -1.21
MSH5-217ENST00000494458 PTGS1P23219 599 aa7.52□□□□□ -1.21
MSH5-217ENST00000494458 YWHABP31946 246 aaKnown RBP7.52□□□□□ -1.21
MSH5-217ENST00000494458 CASP5P51878 434 aa7.52□□□□□ -1.21
MSH5-217ENST00000494458 SNRPFP62306 86 aaKnown RBP7.52□□□□□ -1.21
MSH5-217ENST00000494458 CCZ1BP86790 482 aa7.52□□□□□ -1.21
MSH5-217ENST00000494458 CCZ1P86791 482 aaPredicted RBP7.52□□□□□ -1.21
MSH5-217ENST00000494458 GTF2BQ00403 316 aa7.52□□□□□ -1.21
MSH5-217ENST00000494458 FKBP3Q00688 224 aaKnown RBP7.52□□□□□ -1.21
MSH5-217ENST00000494458 PLCB2Q00722 1185 aa7.52□□□□□ -1.21
MSH5-217ENST00000494458 GRB14Q14449 540 aa7.52□□□□□ -1.21
MSH5-217ENST00000494458 NEDD9Q14511 834 aa7.52□□□□□ -1.21
MSH5-217ENST00000494458 TARBP2Q15633 366 aaKnown RBP7.52□□□□□ -1.21
MSH5-217ENST00000494458 KNOP1Q1ED39 458 aaKnown RBP7.52□□□□□ -1.21
MSH5-217ENST00000494458 FIGNQ5HY92 759 aa7.52□□□□□ -1.21
MSH5-217ENST00000494458 SPECC1LQ69YQ0 1117 aa7.52□□□□□ -1.21
MSH5-217ENST00000494458 PADI6Q6TGC4 694 aa7.52□□□□□ -1.21
MSH5-217ENST00000494458 METTL7BQ6UX53 244 aa7.52□□□□□ -1.21
MSH5-217ENST00000494458 SFR1Q86XK3 245 aa7.52□□□□□ -1.21
MSH5-217ENST00000494458 RASAL3Q86YV0 1011 aa7.52□□□□□ -1.21
MSH5-217ENST00000494458 SLC9A9Q8IVB4 645 aa7.52□□□□□ -1.21
MSH5-217ENST00000494458 C12orf56Q8IXR9 622 aa7.52□□□□□ -1.21
MSH5-217ENST00000494458 MSL3Q8N5Y2 521 aaKnown RBP7.52□□□□□ -1.21
MSH5-217ENST00000494458 CSGALNACT2Q8N6G5 542 aa7.52□□□□□ -1.21
MSH5-217ENST00000494458 TC2NQ8N9U0 490 aa7.52□□□□□ -1.21
MSH5-217ENST00000494458 BANK1Q8NDB2 785 aa7.52□□□□□ -1.21
MSH5-217ENST00000494458 SLC17A8Q8NDX2 589 aa7.52□□□□□ -1.21
MSH5-217ENST00000494458 SPIRE2Q8WWL2 714 aa7.52□□□□□ -1.21
MSH5-217ENST00000494458 USP6NLQ92738 828 aa7.52□□□□□ -1.21
MSH5-217ENST00000494458 EMID1Q96A84 441 aaPredicted RBP7.52□□□□□ -1.21
MSH5-217ENST00000494458 BORCS6Q96GS4 357 aa7.52□□□□□ -1.21
MSH5-217ENST00000494458 ERGIC2Q96RQ1 377 aa7.52□□□□□ -1.21
MSH5-217ENST00000494458 PCYT2Q99447 389 aa7.52□□□□□ -1.21
MSH5-217ENST00000494458 MMP19Q99542 508 aa7.52□□□□□ -1.21
MSH5-217ENST00000494458 PAGR1Q9BTK6 254 aa7.52□□□□□ -1.21
MSH5-217ENST00000494458 C17orf75Q9HAS0 396 aa7.52□□□□□ -1.21
MSH5-217ENST00000494458 PARVGQ9HBI0 331 aa7.52□□□□□ -1.21
MSH5-217ENST00000494458 RRAGDQ9NQL2 400 aaPredicted RBP7.52□□□□□ -1.21
MSH5-217ENST00000494458 TELO2Q9Y4R8 837 aa7.52□□□□□ -1.21
MSH5-217ENST00000494458 LOXHD1Q8IVV2 1947 aa7.52□□□□□ -1.21
MSH5-217ENST00000494458 LRRC37A2A6NM11 1700 aa7.52□□□□□ -1.21
MSH5-217ENST00000494458 TRPM7Q96QT4 1865 aa7.51□□□□□ -1.21
MSH5-217ENST00000494458 RASSF10A6NK89 507 aa7.51□□□□□ -1.21
MSH5-217ENST00000494458 NKRFO15226 690 aaKnown RBP eCLIP7.51□□□□□ -1.21
MSH5-217ENST00000494458 GNA14O95837 355 aa7.51□□□□□ -1.21
MSH5-217ENST00000494458 SLC10A3P09131 477 aa7.51□□□□□ -1.21
MSH5-217ENST00000494458 PYGBP11216 843 aa7.51□□□□□ -1.21
MSH5-217ENST00000494458 HOXD8P13378 290 aaPredicted RBP7.51□□□□□ -1.21
MSH5-217ENST00000494458 HOXB3P14651 431 aaPredicted RBP7.51□□□□□ -1.21
MSH5-217ENST00000494458 SCP2P22307 547 aa7.51□□□□□ -1.21
MSH5-217ENST00000494458 UBA1P22314 1058 aaKnown RBP7.51□□□□□ -1.21
MSH5-217ENST00000494458 TM4SF4P48230 202 aa7.51□□□□□ -1.21
MSH5-217ENST00000494458 DNM2P50570 870 aa7.51□□□□□ -1.21
MSH5-217ENST00000494458 HUNKP57058 714 aa7.51□□□□□ -1.21
MSH5-217ENST00000494458 ALCAMQ13740 583 aa7.51□□□□□ -1.21
MSH5-217ENST00000494458 KCTD2Q14681 263 aa7.51□□□□□ -1.21
MSH5-217ENST00000494458 LRRC41Q15345 812 aa7.51□□□□□ -1.21
MSH5-217ENST00000494458 XKR3Q5GH77 459 aa7.51□□□□□ -1.21
MSH5-217ENST00000494458 CELF3Q5SZQ8 465 aaKnown RBP7.51□□□□□ -1.21
MSH5-217ENST00000494458 MORN1Q5T089 497 aa7.51□□□□□ -1.21
MSH5-217ENST00000494458 RGMBQ6NW40 437 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms