RNA–Protein interactions for RNA: ENST00000494426.1

CLIC3-203, Transcript of chloride intracellular channel 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIC3, Length 1,017 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC3-203ENST00000494426 CEP131Q9UPN4 1083 aa26.31■■□□□ 1.8
CLIC3-203ENST00000494426 CTTNQ14247 550 aaKnown RBP26.3■■□□□ 1.8
CLIC3-203ENST00000494426 SH2D3AQ9BRG2 576 aa26.3■■□□□ 1.8
CLIC3-203ENST00000494426 LXNQ9BS40 222 aa26.3■■□□□ 1.8
CLIC3-203ENST00000494426 CXXC1Q9P0U4 656 aaPredicted RBP26.3■■□□□ 1.8
CLIC3-203ENST00000494426 SEPT9Q9UHD8 586 aaPredicted RBP26.3■■□□□ 1.8
CLIC3-203ENST00000494426 MTMR6Q9Y217 621 aa26.3■■□□□ 1.8
CLIC3-203ENST00000494426 DDX11L8A8MPP1 907 aa26.29■■□□□ 1.8
CLIC3-203ENST00000494426 FXR1P51114 621 aaKnown RBP eCLIP26.29■■□□□ 1.8
CLIC3-203ENST00000494426 CYP4A11Q02928 519 aa26.29■■□□□ 1.8
CLIC3-203ENST00000494426 RSPH3Q86UC2 560 aa26.29■■□□□ 1.8
CLIC3-203ENST00000494426 C4orf19Q8IY42 314 aa26.29■■□□□ 1.8
CLIC3-203ENST00000494426 KIAA0319LQ8IZA0 1049 aa26.29■■□□□ 1.8
CLIC3-203ENST00000494426 LINC01465Q8N7H1 131 aa26.29■■□□□ 1.8
CLIC3-203ENST00000494426 FTOQ9C0B1 505 aaKnown RBP eCLIP26.29■■□□□ 1.8
CLIC3-203ENST00000494426 MRPS6P82932 125 aaKnown RBP26.28■■□□□ 1.8
CLIC3-203ENST00000494426 RESTQ13127 1097 aa26.28■■□□□ 1.8
CLIC3-203ENST00000494426 IL17AQ16552 155 aa26.28■■□□□ 1.8
CLIC3-203ENST00000494426 MTERF2Q49AM1 385 aa26.28■■□□□ 1.8
CLIC3-203ENST00000494426 BRAPQ7Z569 592 aa26.28■■□□□ 1.8
CLIC3-203ENST00000494426 CDY2AQ9Y6F7 541 aa26.28■■□□□ 1.8
CLIC3-203ENST00000494426 ZBTB39O15060 712 aa26.27■■□□□ 1.8
CLIC3-203ENST00000494426 MAGEB2O15479 319 aa26.27■■□□□ 1.8
CLIC3-203ENST00000494426 DKC1O60832 514 aaKnown RBP eCLIP26.27■■□□□ 1.8
CLIC3-203ENST00000494426 FXR2P51116 673 aaKnown RBP eCLIP26.27■■□□□ 1.8
CLIC3-203ENST00000494426 TMEM62Q0P6H9 643 aa26.27■■□□□ 1.8
CLIC3-203ENST00000494426 PLA2G4FQ68DD2 849 aa26.27■■□□□ 1.8
CLIC3-203ENST00000494426 TPH2Q8IWU9 490 aa26.27■■□□□ 1.8
CLIC3-203ENST00000494426 NME8Q8N427 588 aa26.27■■□□□ 1.8
CLIC3-203ENST00000494426 ZNF579Q8NAF0 562 aaKnown RBP26.27■■□□□ 1.8
CLIC3-203ENST00000494426 ZSWIM4Q9H7M6 989 aa26.27■■□□□ 1.8
CLIC3-203ENST00000494426 LOXHD1Q8IVV2 1947 aa26.27■■□□□ 1.8
CLIC3-203ENST00000494426 STX6O43752 255 aa26.26■■□□□ 1.79
CLIC3-203ENST00000494426 RPLP2P05387 115 aaKnown RBP26.26■■□□□ 1.79
CLIC3-203ENST00000494426 SPATA31C1P0DKV0 1188 aa26.26■■□□□ 1.79
CLIC3-203ENST00000494426 ATP2C1P98194 919 aaPredicted RBP26.26■■□□□ 1.79
CLIC3-203ENST00000494426 EFCAB12Q6NXP0 572 aa26.26■■□□□ 1.79
CLIC3-203ENST00000494426 NEK9Q8TD19 979 aa26.26■■□□□ 1.79
CLIC3-203ENST00000494426 LRCH3Q96II8 777 aa26.26■■□□□ 1.79
CLIC3-203ENST00000494426 LAD1O00515 517 aa26.25■■□□□ 1.79
CLIC3-203ENST00000494426 LYPLA2O95372 231 aa26.25■■□□□ 1.79
CLIC3-203ENST00000494426 PRPHP41219 470 aa26.25■■□□□ 1.79
CLIC3-203ENST00000494426 CLCN3P51790 818 aa26.25■■□□□ 1.79
CLIC3-203ENST00000494426 NPEPPSP55786 919 aa26.25■■□□□ 1.79
CLIC3-203ENST00000494426 PLEKHG4Q58EX7 1191 aa26.25■■□□□ 1.79
CLIC3-203ENST00000494426 IER5Q5VY09 327 aa26.25■■□□□ 1.79
CLIC3-203ENST00000494426 CNKSR3Q6P9H4 555 aa26.25■■□□□ 1.79
CLIC3-203ENST00000494426 LRRC71Q8N4P6 559 aa26.25■■□□□ 1.79
CLIC3-203ENST00000494426 SPRYD3Q8NCJ5 442 aa26.25■■□□□ 1.79
CLIC3-203ENST00000494426 DBF4BQ8NFT6 615 aa26.25■■□□□ 1.79
CLIC3-203ENST00000494426 TRPV2Q9Y5S1 764 aa26.25■■□□□ 1.79
CLIC3-203ENST00000494426 ARID2Q68CP9 1835 aa26.25■■□□□ 1.79
CLIC3-203ENST00000494426 IGKV6-21A0A0C4DH24 114 aa26.24■■□□□ 1.79
CLIC3-203ENST00000494426 MED24O75448 989 aa26.24■■□□□ 1.79
CLIC3-203ENST00000494426 ACTN1P12814 892 aa26.24■■□□□ 1.79
CLIC3-203ENST00000494426 YWHABP31946 246 aaKnown RBP26.24■■□□□ 1.79
CLIC3-203ENST00000494426 MKRN4PQ13434 485 aaPredicted RBP26.24■■□□□ 1.79
CLIC3-203ENST00000494426 FAM109BQ6ICB4 259 aaPredicted RBP26.24■■□□□ 1.79
CLIC3-203ENST00000494426 CATSPER3Q86XQ3 398 aa26.24■■□□□ 1.79
CLIC3-203ENST00000494426 METTL13Q8N6R0 699 aa26.24■■□□□ 1.79
CLIC3-203ENST00000494426 CELF4Q9BZC1 486 aaKnown RBP26.24■■□□□ 1.79
CLIC3-203ENST00000494426 CDHR5Q9HBB8 845 aa26.24■■□□□ 1.79
CLIC3-203ENST00000494426 CYP26B1Q9NR63 512 aa26.24■■□□□ 1.79
CLIC3-203ENST00000494426 KDM3AQ9Y4C1 1321 aa26.23■■□□□ 1.79
CLIC3-203ENST00000494426 A0A087WWV3 80 aa26.23■■□□□ 1.79
CLIC3-203ENST00000494426 HSP90AA1P07900 732 aaKnown RBP26.23■■□□□ 1.79
CLIC3-203ENST00000494426 TBC1D8BQ0IIM8 1120 aa26.23■■□□□ 1.79
CLIC3-203ENST00000494426 DRP2Q13474 957 aa26.23■■□□□ 1.79
CLIC3-203ENST00000494426 PDIA5Q14554 519 aa26.23■■□□□ 1.79
CLIC3-203ENST00000494426 LPIN1Q14693 890 aa26.23■■□□□ 1.79
CLIC3-203ENST00000494426 TMEM266Q2M3C6 531 aa26.23■■□□□ 1.79
CLIC3-203ENST00000494426 FBXO47Q5MNV8 452 aa26.23■■□□□ 1.79
CLIC3-203ENST00000494426 FAM173BQ6P4H8 233 aa26.23■■□□□ 1.79
CLIC3-203ENST00000494426 IGSF22Q8N9C0 903 aa26.23■■□□□ 1.79
CLIC3-203ENST00000494426 POLR3CQ9BUI4 534 aaPredicted RBP26.23■■□□□ 1.79
CLIC3-203ENST00000494426 TUFT1Q9NNX1 390 aa26.23■■□□□ 1.79
CLIC3-203ENST00000494426 PTPRSQ13332 1948 aa26.23■■□□□ 1.79
CLIC3-203ENST00000494426 LAMA3Q16787 3333 aa26.22■■□□□ 1.79
CLIC3-203ENST00000494426 GRXCR1A8MXD5 290 aa26.22■■□□□ 1.79
CLIC3-203ENST00000494426 MAFO75444 373 aaPredicted RBP26.22■■□□□ 1.79
CLIC3-203ENST00000494426 VTNP04004 478 aa26.22■■□□□ 1.79
CLIC3-203ENST00000494426 GHRP10912 638 aa26.22■■□□□ 1.79
CLIC3-203ENST00000494426 CEP170P1Q96L14 293 aa26.22■■□□□ 1.79
CLIC3-203ENST00000494426 MTIF3Q9H2K0 278 aaKnown RBP26.22■■□□□ 1.79
CLIC3-203ENST00000494426 SUGCTQ9HAC7 445 aa26.22■■□□□ 1.79
CLIC3-203ENST00000494426 LRWD1Q9UFC0 647 aa26.22■■□□□ 1.79
CLIC3-203ENST00000494426 HSFX4A0A1B0GTS1 333 aaPredicted RBP26.21■■□□□ 1.79
CLIC3-203ENST00000494426 HSFX3A0A1B0GWH4 333 aaPredicted RBP26.21■■□□□ 1.79
CLIC3-203ENST00000494426 ZBBXA8MT70 800 aa26.21■■□□□ 1.79
CLIC3-203ENST00000494426 GPR32O75388 356 aa26.21■■□□□ 1.79
CLIC3-203ENST00000494426 BAIAP3O94812 1187 aa26.21■■□□□ 1.79
CLIC3-203ENST00000494426 RPA1P27694 616 aa26.21■■□□□ 1.79
CLIC3-203ENST00000494426 DTHD1Q6ZMT9 781 aa26.21■■□□□ 1.79
CLIC3-203ENST00000494426 OTUD6AQ7L8S5 288 aa26.21■■□□□ 1.79
CLIC3-203ENST00000494426 AGO3Q9H9G7 860 aaKnown RBP26.21■■□□□ 1.79
CLIC3-203ENST00000494426 SLC4A7Q9Y6M7 1214 aa26.21■■□□□ 1.79
CLIC3-203ENST00000494426 M0QZ92 97 aa26.2■■□□□ 1.78
CLIC3-203ENST00000494426 TMOD1P28289 359 aa26.2■■□□□ 1.78
CLIC3-203ENST00000494426 SF3A1Q15459 793 aaKnown RBP26.2■■□□□ 1.78
CLIC3-203ENST00000494426 ECM1Q16610 540 aa26.2■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms