RNA–Protein interactions for RNA: ENST00000494323.5

PTCD3-219, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 540 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-219ENST00000494323 PPP2R3BQ9Y5P8 575 aa6.47□□□□□ -1.37
PTCD3-219ENST00000494323 MKI67P46013 3256 aaKnown RBP6.46□□□□□ -1.37
PTCD3-219ENST00000494323 CCL15-CCL14A0A0B4J2E2 113 aa6.46□□□□□ -1.38
PTCD3-219ENST00000494323 SSC5DA1L4H1 1573 aa6.46□□□□□ -1.38
PTCD3-219ENST00000494323 ENPP3O14638 875 aa6.46□□□□□ -1.38
PTCD3-219ENST00000494323 HIBADHP31937 336 aaKnown RBP6.46□□□□□ -1.38
PTCD3-219ENST00000494323 CENPFP49454 3210 aa6.46□□□□□ -1.38
PTCD3-219ENST00000494323 CACNB3P54284 484 aa6.46□□□□□ -1.38
PTCD3-219ENST00000494323 RASGRF1Q13972 1273 aa6.46□□□□□ -1.38
PTCD3-219ENST00000494323 CCL15Q16663 113 aa6.46□□□□□ -1.38
PTCD3-219ENST00000494323 GNPTABQ3T906 1256 aa6.46□□□□□ -1.38
PTCD3-219ENST00000494323 SFRP5Q5T4F7 317 aa6.46□□□□□ -1.38
PTCD3-219ENST00000494323 SLC4A10Q6U841 1118 aa6.46□□□□□ -1.38
PTCD3-219ENST00000494323 C22orf34Q6ZV56 151 aa6.46□□□□□ -1.38
PTCD3-219ENST00000494323 ZNF765Q7L2R6 523 aa6.46□□□□□ -1.38
PTCD3-219ENST00000494323 FAM214BQ7L5A3 538 aa6.46□□□□□ -1.38
PTCD3-219ENST00000494323 VSIG10LQ86VR7 867 aa6.46□□□□□ -1.38
PTCD3-219ENST00000494323 FAM178BQ8IXR5 827 aa6.46□□□□□ -1.38
PTCD3-219ENST00000494323 FAM43AQ8N2R8 423 aa6.46□□□□□ -1.38
PTCD3-219ENST00000494323 TDRD7Q8NHU6 1098 aaKnown RBP6.46□□□□□ -1.38
PTCD3-219ENST00000494323 BRI3BPQ8WY22 251 aa6.46□□□□□ -1.38
PTCD3-219ENST00000494323 GCC1Q96CN9 775 aa6.46□□□□□ -1.38
PTCD3-219ENST00000494323 FBXL18Q96ME1 805 aa6.46□□□□□ -1.38
PTCD3-219ENST00000494323 TEPSINQ96N21 525 aa6.46□□□□□ -1.38
PTCD3-219ENST00000494323 LRRC4CQ9HCJ2 640 aa6.46□□□□□ -1.38
PTCD3-219ENST00000494323 ST7Q9NRC1 585 aa6.46□□□□□ -1.38
PTCD3-219ENST00000494323 CCDC39Q9UFE4 941 aa6.46□□□□□ -1.38
PTCD3-219ENST00000494323 TRIOBPQ9H2D6 2365 aa6.45□□□□□ -1.38
PTCD3-219ENST00000494323 GRM8O00222 908 aa6.45□□□□□ -1.38
PTCD3-219ENST00000494323 DDAH1O94760 285 aa6.45□□□□□ -1.38
PTCD3-219ENST00000494323 KIR3DL1P43629 444 aa6.45□□□□□ -1.38
PTCD3-219ENST00000494323 GTF2A2P52657 109 aa6.45□□□□□ -1.38
PTCD3-219ENST00000494323 FKBP1AP62942 108 aaKnown RBP6.45□□□□□ -1.38
PTCD3-219ENST00000494323 CHAF1AQ13111 956 aaPredicted RBP6.45□□□□□ -1.38
PTCD3-219ENST00000494323 VGLL4Q14135 290 aa6.45□□□□□ -1.38
PTCD3-219ENST00000494323 SLC4A8Q2Y0W8 1093 aa6.45□□□□□ -1.38
PTCD3-219ENST00000494323 MRM1Q6IN84 353 aaKnown RBP6.45□□□□□ -1.38
PTCD3-219ENST00000494323 C6orf15Q6UXA7 325 aaPredicted RBP6.45□□□□□ -1.38
PTCD3-219ENST00000494323 ZKSCAN4Q969J2 545 aaPredicted RBP6.45□□□□□ -1.38
PTCD3-219ENST00000494323 ARHGAP39Q9C0H5 1083 aa6.45□□□□□ -1.38
PTCD3-219ENST00000494323 KANSL2Q9H9L4 492 aa6.45□□□□□ -1.38
PTCD3-219ENST00000494323 PTCH2Q9Y6C5 1203 aa6.45□□□□□ -1.38
PTCD3-219ENST00000494323 FAM205AQ6ZU69 1335 aa6.45□□□□□ -1.38
PTCD3-219ENST00000494323 FANCIQ9NVI1 1328 aa6.45□□□□□ -1.38
PTCD3-219ENST00000494323 PAX4O43316 350 aa6.44□□□□□ -1.38
PTCD3-219ENST00000494323 FRAT2O75474 233 aaPredicted RBP6.44□□□□□ -1.38
PTCD3-219ENST00000494323 GJB6O95452 261 aa6.44□□□□□ -1.38
PTCD3-219ENST00000494323 PRNPP04156 253 aa6.44□□□□□ -1.38
PTCD3-219ENST00000494323 NBPF7P0C2Y1 421 aaPredicted RBP6.44□□□□□ -1.38
PTCD3-219ENST00000494323 TNFAIP1Q13829 316 aa6.44□□□□□ -1.38
PTCD3-219ENST00000494323 UBE4AQ14139 1066 aa6.44□□□□□ -1.38
PTCD3-219ENST00000494323 SLC9C1Q4G0N8 1177 aa6.44□□□□□ -1.38
PTCD3-219ENST00000494323 KIAA1211LQ6NV74 962 aa6.44□□□□□ -1.38
PTCD3-219ENST00000494323 MIGA2Q7L4E1 593 aa6.44□□□□□ -1.38
PTCD3-219ENST00000494323 CCDC144CPQ8IYA2 1237 aa6.44□□□□□ -1.38
PTCD3-219ENST00000494323 LILRB2Q8N423 598 aa6.44□□□□□ -1.38
PTCD3-219ENST00000494323 SH3TC2Q8TF17 1288 aa6.44□□□□□ -1.38
PTCD3-219ENST00000494323 KLHL6Q8WZ60 621 aa6.44□□□□□ -1.38
PTCD3-219ENST00000494323 VWCEQ96DN2 955 aa6.44□□□□□ -1.38
PTCD3-219ENST00000494323 KAZALD1Q96I82 304 aa6.44□□□□□ -1.38
PTCD3-219ENST00000494323 SUCLG2Q96I99 432 aa6.44□□□□□ -1.38
PTCD3-219ENST00000494323 ZNF333Q96JL9 665 aa6.44□□□□□ -1.38
PTCD3-219ENST00000494323 HEXIM2Q96MH2 286 aaKnown RBP6.44□□□□□ -1.38
PTCD3-219ENST00000494323 MKRN2Q9H000 416 aaKnown RBP6.44□□□□□ -1.38
PTCD3-219ENST00000494323 MKNK2Q9HBH9 465 aa6.44□□□□□ -1.38
PTCD3-219ENST00000494323 KCNH3Q9ULD8 1083 aa6.44□□□□□ -1.38
PTCD3-219ENST00000494323 PCDHB10Q9UN67 800 aa6.44□□□□□ -1.38
PTCD3-219ENST00000494323 RIPOR2Q9Y4F9 1068 aa6.44□□□□□ -1.38
PTCD3-219ENST00000494323 IL16Q14005 1332 aa6.44□□□□□ -1.38
PTCD3-219ENST00000494323 CACNA1FO60840 1977 aa6.44□□□□□ -1.38
PTCD3-219ENST00000494323 COL1A1P02452 1464 aaPredicted RBP6.43□□□□□ -1.38
PTCD3-219ENST00000494323 HTTP42858 3142 aa6.43□□□□□ -1.38
PTCD3-219ENST00000494323 ANKRD62A6NC57 917 aa6.43□□□□□ -1.38
PTCD3-219ENST00000494323 BTBD19C9JJ37 291 aa6.43□□□□□ -1.38
PTCD3-219ENST00000494323 H0YGN5 161 aa6.43□□□□□ -1.38
PTCD3-219ENST00000494323 PDPK1O15530 556 aa6.43□□□□□ -1.38
PTCD3-219ENST00000494323 ZNF865P0CJ78 1059 aaPredicted RBP6.43□□□□□ -1.38
PTCD3-219ENST00000494323 NAT2P11245 290 aa6.43□□□□□ -1.38
PTCD3-219ENST00000494323 CETPP11597 493 aa6.43□□□□□ -1.38
PTCD3-219ENST00000494323 TAL1P17542 331 aaPredicted RBP6.43□□□□□ -1.38
PTCD3-219ENST00000494323 FXR1P51114 621 aaKnown RBP eCLIP6.43□□□□□ -1.38
PTCD3-219ENST00000494323 ZNF143P52747 638 aaPredicted RBP6.43□□□□□ -1.38
PTCD3-219ENST00000494323 ARHGEF6Q15052 776 aa6.43□□□□□ -1.38
PTCD3-219ENST00000494323 LRRC24Q50LG9 513 aa6.43□□□□□ -1.38
PTCD3-219ENST00000494323 ANKRD39Q53RE8 183 aa6.43□□□□□ -1.38
PTCD3-219ENST00000494323 PPFIBP1Q86W92 1011 aa6.43□□□□□ -1.38
PTCD3-219ENST00000494323 WDR63Q8IWG1 891 aa6.43□□□□□ -1.38
PTCD3-219ENST00000494323 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.43□□□□□ -1.38
PTCD3-219ENST00000494323 KLHDC4Q8TBB5 520 aa6.43□□□□□ -1.38
PTCD3-219ENST00000494323 PIWIL2Q8TC59 973 aaKnown RBP6.43□□□□□ -1.38
PTCD3-219ENST00000494323 DNAJC7Q99615 494 aa6.43□□□□□ -1.38
PTCD3-219ENST00000494323 ZC3H7BQ9UGR2 993 aaKnown RBP6.43□□□□□ -1.38
PTCD3-219ENST00000494323 ECM29Q5VYK3 1845 aa6.43□□□□□ -1.38
PTCD3-219ENST00000494323 AK9Q5TCS8 1911 aa6.42□□□□□ -1.38
PTCD3-219ENST00000494323 C9IYK1 514 aa6.42□□□□□ -1.38
PTCD3-219ENST00000494323 TLR2O60603 784 aa6.42□□□□□ -1.38
PTCD3-219ENST00000494323 ALDH1L1O75891 902 aa6.42□□□□□ -1.38
PTCD3-219ENST00000494323 CBX7O95931 251 aa6.42□□□□□ -1.38
PTCD3-219ENST00000494323 TP53P04637 393 aaPredicted RBP6.42□□□□□ -1.38
PTCD3-219ENST00000494323 HSD3B2P26439 372 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms