RNA–Protein interactions for RNA: ENST00000493553.1

PRPF3-206, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-206ENST00000493553 ADSSL1Q8N142 457 aa11.18□□□□□ -0.62
PRPF3-206ENST00000493553 SNX29Q8TEQ0 813 aa11.18□□□□□ -0.62
PRPF3-206ENST00000493553 CACTINQ8WUQ7 758 aaKnown RBP11.18□□□□□ -0.62
PRPF3-206ENST00000493553 NAA15Q9BXJ9 866 aaKnown RBP11.18□□□□□ -0.62
PRPF3-206ENST00000493553 TRIM9Q9C026 710 aa11.18□□□□□ -0.62
PRPF3-206ENST00000493553 DEFB129Q9H1M3 183 aa11.18□□□□□ -0.62
PRPF3-206ENST00000493553 KCNF1Q9H3M0 494 aa11.18□□□□□ -0.62
PRPF3-206ENST00000493553 THAP9Q9H5L6 903 aa11.18□□□□□ -0.62
PRPF3-206ENST00000493553 AS3MTQ9HBK9 375 aa11.18□□□□□ -0.62
PRPF3-206ENST00000493553 TMEM260Q9NX78 707 aa11.18□□□□□ -0.62
PRPF3-206ENST00000493553 MAGEC2Q9UBF1 373 aaPredicted RBP11.18□□□□□ -0.62
PRPF3-206ENST00000493553 LIMA1Q9UHB6 759 aaKnown RBP11.18□□□□□ -0.62
PRPF3-206ENST00000493553 HCN2Q9UL51 889 aa11.18□□□□□ -0.62
PRPF3-206ENST00000493553 PRR12Q9ULL5 1215 aa11.18□□□□□ -0.62
PRPF3-206ENST00000493553 PCDHAC2Q9Y5I4 1007 aa11.18□□□□□ -0.62
PRPF3-206ENST00000493553 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.18□□□□□ -0.624e-6■■■■□ 22
PRPF3-206ENST00000493553 FZD9O00144 591 aa11.17□□□□□ -0.62
PRPF3-206ENST00000493553 KHNYNO15037 678 aaKnown RBP11.17□□□□□ -0.62
PRPF3-206ENST00000493553 WDR46O15213 610 aaKnown RBP11.17□□□□□ -0.62
PRPF3-206ENST00000493553 EFSO43281 561 aa11.17□□□□□ -0.62
PRPF3-206ENST00000493553 ZSCAN12O43309 604 aa11.17□□□□□ -0.62
PRPF3-206ENST00000493553 ARAFP10398 606 aa11.17□□□□□ -0.62
PRPF3-206ENST00000493553 ASIC1P78348 528 aa11.17□□□□□ -0.62
PRPF3-206ENST00000493553 RASA3Q14644 834 aa11.17□□□□□ -0.62
PRPF3-206ENST00000493553 TMEM119Q4V9L6 283 aa11.17□□□□□ -0.62
PRPF3-206ENST00000493553 KRT26Q7Z3Y9 468 aa11.17□□□□□ -0.62
PRPF3-206ENST00000493553 NELFBQ8WX92 580 aa11.17□□□□□ -0.62
PRPF3-206ENST00000493553 LARP4BQ92615 738 aaKnown RBP11.17□□□□□ -0.62
PRPF3-206ENST00000493553 FEZ1Q99689 392 aa11.17□□□□□ -0.62
PRPF3-206ENST00000493553 PDGFDQ9GZP0 370 aaPredicted RBP11.17□□□□□ -0.62
PRPF3-206ENST00000493553 KIAA1683Q9H0B3 1180 aa11.17□□□□□ -0.62
PRPF3-206ENST00000493553 HSD3B7Q9H2F3 369 aa11.17□□□□□ -0.62
PRPF3-206ENST00000493553 RANBP17Q9H2T7 1088 aaKnown RBP11.17□□□□□ -0.62
PRPF3-206ENST00000493553 KCNMB3Q9NPA1 279 aa11.17□□□□□ -0.62
PRPF3-206ENST00000493553 PAXBP1Q9Y5B6 917 aa11.17□□□□□ -0.62
PRPF3-206ENST00000493553 ZNF646O15015 1829 aaPredicted RBP11.16□□□□□ -0.62
PRPF3-206ENST00000493553 ITIH6Q6UXX5 1313 aa11.16□□□□□ -0.62
PRPF3-206ENST00000493553 A0A087WWV3 80 aa11.16□□□□□ -0.62
PRPF3-206ENST00000493553 NFKBIEO00221 500 aa11.16□□□□□ -0.62
PRPF3-206ENST00000493553 MEIS2O14770 477 aa11.16□□□□□ -0.62
PRPF3-206ENST00000493553 ADAMTS3O15072 1205 aa11.16□□□□□ -0.62
PRPF3-206ENST00000493553 ARHGAP6O43182 974 aa11.16□□□□□ -0.62
PRPF3-206ENST00000493553 TDP2O95551 362 aa11.16□□□□□ -0.62
PRPF3-206ENST00000493553 ATP1A3P13637 1013 aa11.16□□□□□ -0.62
PRPF3-206ENST00000493553 ZNF76P36508 570 aa11.16□□□□□ -0.62
PRPF3-206ENST00000493553 SETQ01105 290 aaPredicted RBP11.16□□□□□ -0.62
PRPF3-206ENST00000493553 FMR1Q06787 632 aaKnown RBP eCLIP11.16□□□□□ -0.62
PRPF3-206ENST00000493553 NR1I3Q14994 352 aa11.16□□□□□ -0.62
PRPF3-206ENST00000493553 UBE2SQ16763 222 aa11.16□□□□□ -0.62
PRPF3-206ENST00000493553 KLHL10Q6JEL2 608 aa11.16□□□□□ -0.62
PRPF3-206ENST00000493553 LRRC69Q6ZNQ3 347 aa11.16□□□□□ -0.62
PRPF3-206ENST00000493553 SLCO4C1Q6ZQN7 724 aa11.16□□□□□ -0.62
PRPF3-206ENST00000493553 UNC13DQ70J99 1090 aa11.16□□□□□ -0.62
PRPF3-206ENST00000493553 RASGRP2Q7LDG7 609 aa11.16□□□□□ -0.62
PRPF3-206ENST00000493553 CNGA4Q8IV77 575 aa11.16□□□□□ -0.62
PRPF3-206ENST00000493553 PRPF38AQ8NAV1 312 aaKnown RBP11.16□□□□□ -0.62
PRPF3-206ENST00000493553 CRYGNQ8WXF5 182 aa11.16□□□□□ -0.62
PRPF3-206ENST00000493553 RAD54LQ92698 747 aa11.16□□□□□ -0.62
PRPF3-206ENST00000493553 ZNF830Q96NB3 372 aaPredicted RBP11.16□□□□□ -0.62
PRPF3-206ENST00000493553 NAP1L5Q96NT1 182 aaPredicted RBP11.16□□□□□ -0.62
PRPF3-206ENST00000493553 C2orf49Q9BVC5 232 aaPredicted RBP11.16□□□□□ -0.62
PRPF3-206ENST00000493553 ZNF341Q9BYN7 854 aa11.16□□□□□ -0.62
PRPF3-206ENST00000493553 PHACTR1Q9C0D0 580 aa11.16□□□□□ -0.62
PRPF3-206ENST00000493553 TMEM39BQ9GZU3 492 aa11.16□□□□□ -0.62
PRPF3-206ENST00000493553 NEUROD4Q9HD90 331 aa11.16□□□□□ -0.62
PRPF3-206ENST00000493553 NRBP1Q9UHY1 535 aa11.16□□□□□ -0.62
PRPF3-206ENST00000493553 BCS1LQ9Y276 419 aa11.16□□□□□ -0.62
PRPF3-206ENST00000493553 CTDP1Q9Y5B0 961 aaPredicted RBP11.16□□□□□ -0.62
PRPF3-206ENST00000493553 MYH4Q9Y623 1939 aa11.15□□□□□ -0.62
PRPF3-206ENST00000493553 A0A1W2PRG0 241 aa11.15□□□□□ -0.62
PRPF3-206ENST00000493553 STX10O60499 249 aa11.15□□□□□ -0.62
PRPF3-206ENST00000493553 CD33P20138 364 aa11.15□□□□□ -0.62
PRPF3-206ENST00000493553 CCNE1P24864 410 aa11.15□□□□□ -0.62
PRPF3-206ENST00000493553 CCT6AP40227 531 aaKnown RBP11.15□□□□□ -0.62
PRPF3-206ENST00000493553 LRRC63Q05C16 580 aa11.15□□□□□ -0.62
PRPF3-206ENST00000493553 CCDC144BQ3MJ40 725 aa11.15□□□□□ -0.62
PRPF3-206ENST00000493553 SUPT20HL1Q3ZLR7 823 aa11.15□□□□□ -0.62
PRPF3-206ENST00000493553 FAM83BQ5T0W9 1011 aa11.15□□□□□ -0.62
PRPF3-206ENST00000493553 XRRA1Q6P2D8 792 aa11.15□□□□□ -0.62
PRPF3-206ENST00000493553 CCDC65Q8IXS2 484 aa11.15□□□□□ -0.62
PRPF3-206ENST00000493553 GUF1Q8N442 669 aaKnown RBP11.15□□□□□ -0.62
PRPF3-206ENST00000493553 SCG3Q8WXD2 468 aaKnown RBP11.15□□□□□ -0.62
PRPF3-206ENST00000493553 PANX2Q96RD6 677 aa11.15□□□□□ -0.62
PRPF3-206ENST00000493553 TSG101Q99816 390 aa11.15□□□□□ -0.62
PRPF3-206ENST00000493553 HINFPQ9BQA5 517 aa11.15□□□□□ -0.62
PRPF3-206ENST00000493553 WDR18Q9BV38 432 aa11.15□□□□□ -0.62
PRPF3-206ENST00000493553 WDR11Q9BZH6 1224 aa11.15□□□□□ -0.62
PRPF3-206ENST00000493553 BLZF1Q9H2G9 400 aa11.15□□□□□ -0.62
PRPF3-206ENST00000493553 PGAP2Q9UHJ9 254 aa11.15□□□□□ -0.62
PRPF3-206ENST00000493553 CNOT7Q9UIV1 285 aaKnown RBP11.15□□□□□ -0.62
PRPF3-206ENST00000493553 CTNND2Q9UQB3 1225 aa11.15□□□□□ -0.62
PRPF3-206ENST00000493553 HCN4Q9Y3Q4 1203 aa11.15□□□□□ -0.62
PRPF3-206ENST00000493553 SIPA1L1O43166 1804 aa11.14□□□□□ -0.63
PRPF3-206ENST00000493553 PITPNM2Q9BZ72 1349 aa11.14□□□□□ -0.63
PRPF3-206ENST00000493553 A0A1W2PQC6 194 aa11.14□□□□□ -0.63
PRPF3-206ENST00000493553 N4BP3O15049 544 aa11.14□□□□□ -0.63
PRPF3-206ENST00000493553 SLC37A4O43826 429 aa11.14□□□□□ -0.63
PRPF3-206ENST00000493553 KLRC4O43908 158 aa11.14□□□□□ -0.63
PRPF3-206ENST00000493553 ICAM1P05362 532 aa11.14□□□□□ -0.63
PRPF3-206ENST00000493553 GMPSP49915 693 aaPredicted RBP11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms