RNA–Protein interactions for RNA: ENST00000493522.6

CTSA-209, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 901 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-209ENST00000493522 CKAP2LQ8IYA6 745 aa13.02□□□□□ -0.33
CTSA-209ENST00000493522 RETREG2Q8NC44 543 aa13.02□□□□□ -0.33
CTSA-209ENST00000493522 PHOSPHO2Q8TCD6 241 aa13.02□□□□□ -0.33
CTSA-209ENST00000493522 AFAP1L1Q8TED9 768 aa13.02□□□□□ -0.33
CTSA-209ENST00000493522 MTMR9Q96QG7 549 aa13.02□□□□□ -0.33
CTSA-209ENST00000493522 TTC12Q9H892 705 aaPredicted RBP13.02□□□□□ -0.33
CTSA-209ENST00000493522 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.02□□□□□ -0.33
CTSA-209ENST00000493522 GTF2IRD1Q9UHL9 959 aa13.02□□□□□ -0.33
CTSA-209ENST00000493522 PCDHA12Q9UN75 941 aa13.02□□□□□ -0.33
CTSA-209ENST00000493522 MYH11P35749 1972 aa13.01□□□□□ -0.33
CTSA-209ENST00000493522 C17orf102A2RUQ5 167 aa13.01□□□□□ -0.33
CTSA-209ENST00000493522 POTEMA6NI47 508 aa13.01□□□□□ -0.33
CTSA-209ENST00000493522 EML1O00423 815 aa13.01□□□□□ -0.33
CTSA-209ENST00000493522 POU3F3P20264 500 aaPredicted RBP13.01□□□□□ -0.33
CTSA-209ENST00000493522 SLC26A2P50443 739 aa13.01□□□□□ -0.33
CTSA-209ENST00000493522 IGBP1P78318 339 aa13.01□□□□□ -0.33
CTSA-209ENST00000493522 PRKCEQ02156 737 aa13.01□□□□□ -0.33
CTSA-209ENST00000493522 SPIRE1Q08AE8 756 aa13.01□□□□□ -0.33
CTSA-209ENST00000493522 PTGDRQ13258 359 aa13.01□□□□□ -0.33
CTSA-209ENST00000493522 BFSP2Q13515 415 aa13.01□□□□□ -0.33
CTSA-209ENST00000493522 PLCB4Q15147 1175 aa13.01□□□□□ -0.33
CTSA-209ENST00000493522 PTGISQ16647 500 aa13.01□□□□□ -0.33
CTSA-209ENST00000493522 UGCGQ16739 394 aa13.01□□□□□ -0.33
CTSA-209ENST00000493522 B3GNT9Q6UX72 402 aa13.01□□□□□ -0.33
CTSA-209ENST00000493522 PLPPR4Q7Z2D5 763 aa13.01□□□□□ -0.33
CTSA-209ENST00000493522 TRMT1LQ7Z2T5 733 aaKnown RBP13.01□□□□□ -0.33
CTSA-209ENST00000493522 BANK1Q8NDB2 785 aa13.01□□□□□ -0.33
CTSA-209ENST00000493522 LMBR1Q8WVP7 490 aa13.01□□□□□ -0.33
CTSA-209ENST00000493522 ATP6V0A1Q93050 837 aa13.01□□□□□ -0.33
CTSA-209ENST00000493522 FTOQ9C0B1 505 aaKnown RBP eCLIP13.01□□□□□ -0.33
CTSA-209ENST00000493522 RNPEPQ9H4A4 650 aa13.01□□□□□ -0.33
CTSA-209ENST00000493522 ZSCAN16Q9H4T2 348 aaPredicted RBP13.01□□□□□ -0.33
CTSA-209ENST00000493522 POTEB3A0JP26 581 aa13□□□□□ -0.33
CTSA-209ENST00000493522 LAD1O00515 517 aa13□□□□□ -0.33
CTSA-209ENST00000493522 F13A1P00488 732 aa13□□□□□ -0.33
CTSA-209ENST00000493522 IQCF3P0C7M6 154 aa13□□□□□ -0.33
CTSA-209ENST00000493522 ZSCAN22P10073 491 aaPredicted RBP13□□□□□ -0.33
CTSA-209ENST00000493522 PDIA4P13667 645 aaKnown RBP13□□□□□ -0.33
CTSA-209ENST00000493522 TFF2Q03403 129 aa13□□□□□ -0.33
CTSA-209ENST00000493522 PKP1Q13835 747 aa13□□□□□ -0.33
CTSA-209ENST00000493522 GRIK4Q16099 956 aa13□□□□□ -0.33
CTSA-209ENST00000493522 FAM173BQ6P4H8 233 aa13□□□□□ -0.33
CTSA-209ENST00000493522 POTEBQ6S5H4 581 aa13□□□□□ -0.33
CTSA-209ENST00000493522 CCDC155Q8N6L0 562 aa13□□□□□ -0.33
CTSA-209ENST00000493522 ATP8B4Q8TF62 1192 aa13□□□□□ -0.33
CTSA-209ENST00000493522 FAM167AQ96KS9 214 aa13□□□□□ -0.33
CTSA-209ENST00000493522 SETD4Q9NVD3 440 aa13□□□□□ -0.33
CTSA-209ENST00000493522 DAXXQ9UER7 740 aaPredicted RBP13□□□□□ -0.33
CTSA-209ENST00000493522 SEPT9Q9UHD8 586 aaPredicted RBP13□□□□□ -0.33
CTSA-209ENST00000493522 MAFBQ9Y5Q3 323 aaPredicted RBP13□□□□□ -0.33
CTSA-209ENST00000493522 MTCH2Q9Y6C9 303 aa13□□□□□ -0.33
CTSA-209ENST00000493522 COL1A2P08123 1366 aa12.99□□□□□ -0.33
CTSA-209ENST00000493522 NRCAMQ92823 1304 aa12.99□□□□□ -0.33
CTSA-209ENST00000493522 BAIAP3O94812 1187 aa12.99□□□□□ -0.33
CTSA-209ENST00000493522 BMP15O95972 392 aa12.99□□□□□ -0.33
CTSA-209ENST00000493522 OATP04181 439 aa12.99□□□□□ -0.33
CTSA-209ENST00000493522 GNAT1P11488 350 aa12.99□□□□□ -0.33
CTSA-209ENST00000493522 BMP1P13497 986 aa12.99□□□□□ -0.33
CTSA-209ENST00000493522 INSRRP14616 1297 aa12.99□□□□□ -0.33
CTSA-209ENST00000493522 TECP42680 631 aa12.99□□□□□ -0.33
CTSA-209ENST00000493522 ZNF200P98182 395 aaPredicted RBP12.99□□□□□ -0.33
CTSA-209ENST00000493522 ATP2C1P98194 919 aaPredicted RBP12.99□□□□□ -0.33
CTSA-209ENST00000493522 CYP4A11Q02928 519 aa12.99□□□□□ -0.33
CTSA-209ENST00000493522 HIC1Q14526 733 aa12.99□□□□□ -0.33
CTSA-209ENST00000493522 EPHA7Q15375 998 aa12.99□□□□□ -0.33
CTSA-209ENST00000493522 HERC6Q8IVU3 1022 aa12.99□□□□□ -0.33
CTSA-209ENST00000493522 C4orf32Q8N8J7 132 aa12.99□□□□□ -0.33
CTSA-209ENST00000493522 TRAPPC12Q8WVT3 735 aa12.99□□□□□ -0.33
CTSA-209ENST00000493522 BBXQ8WY36 941 aaPredicted RBP12.99□□□□□ -0.33
CTSA-209ENST00000493522 TNPO1Q92973 898 aaKnown RBP12.99□□□□□ -0.33
CTSA-209ENST00000493522 LXNQ9BS40 222 aa12.99□□□□□ -0.33
CTSA-209ENST00000493522 C1QTNF1Q9BXJ1 281 aa12.99□□□□□ -0.33
CTSA-209ENST00000493522 CERS4Q9HA82 394 aa12.99□□□□□ -0.33
CTSA-209ENST00000493522 TUBE1Q9UJT0 475 aa12.99□□□□□ -0.33
CTSA-209ENST00000493522 COG5Q9UP83 839 aa12.99□□□□□ -0.33
CTSA-209ENST00000493522 CEP131Q9UPN4 1083 aa12.99□□□□□ -0.33
CTSA-209ENST00000493522 RFXAPO00287 272 aa12.98□□□□□ -0.33
CTSA-209ENST00000493522 TREHO43280 583 aa12.98□□□□□ -0.33
CTSA-209ENST00000493522 ZNF862O60290 1169 aa12.98□□□□□ -0.33
CTSA-209ENST00000493522 HBP1O60381 514 aa12.98□□□□□ -0.33
CTSA-209ENST00000493522 DKC1O60832 514 aaKnown RBP eCLIP12.98□□□□□ -0.33
CTSA-209ENST00000493522 ATP4AP20648 1035 aa12.98□□□□□ -0.33
CTSA-209ENST00000493522 HOXC8P31273 242 aa12.98□□□□□ -0.33
CTSA-209ENST00000493522 PRPHP41219 470 aa12.98□□□□□ -0.33
CTSA-209ENST00000493522 QARSP47897 775 aaKnown RBP12.98□□□□□ -0.33
CTSA-209ENST00000493522 KCNJ6P48051 423 aa12.98□□□□□ -0.33
CTSA-209ENST00000493522 FXR2P51116 673 aaKnown RBP eCLIP12.98□□□□□ -0.33
CTSA-209ENST00000493522 KCNQ1P51787 676 aa12.98□□□□□ -0.33
CTSA-209ENST00000493522 PSMC5P62195 406 aa12.98□□□□□ -0.33
CTSA-209ENST00000493522 CEBPZQ03701 1054 aaKnown RBP12.98□□□□□ -0.33
CTSA-209ENST00000493522 CTTNQ14247 550 aaKnown RBP12.98□□□□□ -0.33
CTSA-209ENST00000493522 SF3A1Q15459 793 aaKnown RBP12.98□□□□□ -0.33
CTSA-209ENST00000493522 FOXD4L6Q3SYB3 417 aaPredicted RBP12.98□□□□□ -0.33
CTSA-209ENST00000493522 FOXD4L3Q6VB84 417 aaPredicted RBP12.98□□□□□ -0.33
CTSA-209ENST00000493522 ERMNQ8TAM6 284 aa12.98□□□□□ -0.33
CTSA-209ENST00000493522 CAGE1Q8TC20 777 aa12.98□□□□□ -0.33
CTSA-209ENST00000493522 NEK9Q8TD19 979 aa12.98□□□□□ -0.33
CTSA-209ENST00000493522 ARNTL2Q8WYA1 636 aa12.98□□□□□ -0.33
CTSA-209ENST00000493522 DYDC2Q96IM9 177 aa12.98□□□□□ -0.33
CTSA-209ENST00000493522 NECAB3Q96P71 396 aaPredicted RBP12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms