RNA–Protein interactions for RNA: ENST00000493208.1

IRF1-210, Transcript of interferon regulatory factor 1, humanhuman

TSL 1 (best)

Gene IRF1, Length 1,023 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-210ENST00000493208 CHMP2AO43633 222 aa15.31■□□□□ 0.04
IRF1-210ENST00000493208 NCK2O43639 380 aa15.31■□□□□ 0.04
IRF1-210ENST00000493208 KRT2P35908 639 aa15.31■□□□□ 0.04
IRF1-210ENST00000493208 NEK4P51957 841 aa15.31■□□□□ 0.04
IRF1-210ENST00000493208 CRYBB1P53674 252 aaPredicted RBP15.31■□□□□ 0.04
IRF1-210ENST00000493208 TBC1D8BQ0IIM8 1120 aa15.31■□□□□ 0.04
IRF1-210ENST00000493208 NFX1Q12986 1120 aaKnown RBP15.31■□□□□ 0.04
IRF1-210ENST00000493208 BTG3Q14201 252 aaPredicted RBP15.31■□□□□ 0.04
IRF1-210ENST00000493208 LETM2Q2VYF4 491 aa15.31■□□□□ 0.04
IRF1-210ENST00000493208 SLFN12Q8IYM2 578 aa15.31■□□□□ 0.04
IRF1-210ENST00000493208 PHF20Q9BVI0 1012 aa15.31■□□□□ 0.04
IRF1-210ENST00000493208 COL25A1Q9BXS0 654 aaPredicted RBP15.31■□□□□ 0.04
IRF1-210ENST00000493208 LMAN2LQ9H0V9 348 aa15.31■□□□□ 0.04
IRF1-210ENST00000493208 UPF2Q9HAU5 1272 aaKnown RBP15.31■□□□□ 0.04
IRF1-210ENST00000493208 AAASQ9NRG9 546 aa15.31■□□□□ 0.04
IRF1-210ENST00000493208 AKT3Q9Y243 479 aa15.31■□□□□ 0.04
IRF1-210ENST00000493208 PPME1Q9Y570 386 aa15.31■□□□□ 0.04
IRF1-210ENST00000493208 PCDHB7Q9Y5E2 793 aa15.31■□□□□ 0.04
IRF1-210ENST00000493208 ENPP3O14638 875 aa15.3■□□□□ 0.04
IRF1-210ENST00000493208 HOXA2O43364 376 aa15.3■□□□□ 0.04
IRF1-210ENST00000493208 ZSCAN20P17040 1043 aaPredicted RBP15.3■□□□□ 0.04
IRF1-210ENST00000493208 CD52P31358 61 aa15.3■□□□□ 0.04
IRF1-210ENST00000493208 AK2P54819 239 aa15.3■□□□□ 0.04
IRF1-210ENST00000493208 PRKCEQ02156 737 aa15.3■□□□□ 0.04
IRF1-210ENST00000493208 TMEM62Q0P6H9 643 aa15.3■□□□□ 0.04
IRF1-210ENST00000493208 MKRN4PQ13434 485 aaPredicted RBP15.3■□□□□ 0.04
IRF1-210ENST00000493208 COL4A6Q14031 1691 aa15.3■□□□□ 0.04
IRF1-210ENST00000493208 EPC2Q52LR7 807 aa15.3■□□□□ 0.04
IRF1-210ENST00000493208 NAALADL2Q58DX5 795 aa15.3■□□□□ 0.04
IRF1-210ENST00000493208 XKR3Q5GH77 459 aa15.3■□□□□ 0.04
IRF1-210ENST00000493208 PPP4R3AQ6IN85 833 aa15.3■□□□□ 0.04
IRF1-210ENST00000493208 TMCO2Q7Z6W1 182 aaPredicted RBP15.3■□□□□ 0.04
IRF1-210ENST00000493208 ADGRA3Q8IWK6 1321 aa15.3■□□□□ 0.04
IRF1-210ENST00000493208 TMEM192Q8IY95 271 aa15.3■□□□□ 0.04
IRF1-210ENST00000493208 TRAPPC12Q8WVT3 735 aa15.3■□□□□ 0.04
IRF1-210ENST00000493208 RSPH1Q8WYR4 309 aa15.3■□□□□ 0.04
IRF1-210ENST00000493208 MRPL38Q96DV4 380 aaKnown RBP15.3■□□□□ 0.04
IRF1-210ENST00000493208 PLVAPQ9BX97 442 aa15.3■□□□□ 0.04
IRF1-210ENST00000493208 INO80BQ9C086 356 aaPredicted RBP15.3■□□□□ 0.04
IRF1-210ENST00000493208 SUGCTQ9HAC7 445 aa15.3■□□□□ 0.04
IRF1-210ENST00000493208 TPCN1Q9ULQ1 816 aa15.3■□□□□ 0.04
IRF1-210ENST00000493208 PADI3Q9ULW8 664 aa15.3■□□□□ 0.04
IRF1-210ENST00000493208 FAM50BQ9Y247 325 aa15.3■□□□□ 0.04
IRF1-210ENST00000493208 GBF1Q92538 1859 aa15.29■□□□□ 0.04
IRF1-210ENST00000493208 DOCK5Q9H7D0 1870 aa15.29■□□□□ 0.04
IRF1-210ENST00000493208 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.29■□□□□ 0.04
IRF1-210ENST00000493208 CARNS1A5YM72 827 aa15.29■□□□□ 0.04
IRF1-210ENST00000493208 CCNT1O60563 726 aaKnown RBP15.29■□□□□ 0.04
IRF1-210ENST00000493208 C22orf31O95567 290 aa15.29■□□□□ 0.04
IRF1-210ENST00000493208 CTNNB1P35222 781 aa15.29■□□□□ 0.04
IRF1-210ENST00000493208 GPM6BQ13491 265 aa15.29■□□□□ 0.04
IRF1-210ENST00000493208 CSPP1Q1MSJ5 1256 aa15.29■□□□□ 0.04
IRF1-210ENST00000493208 INF2Q27J81 1249 aa15.29■□□□□ 0.04
IRF1-210ENST00000493208 TRMT1LQ7Z2T5 733 aaKnown RBP15.29■□□□□ 0.04
IRF1-210ENST00000493208 CMTR2Q8IYT2 770 aaKnown RBP15.29■□□□□ 0.04
IRF1-210ENST00000493208 GDPD5Q8WTR4 605 aa15.29■□□□□ 0.04
IRF1-210ENST00000493208 GTF3C6Q969F1 213 aa15.29■□□□□ 0.04
IRF1-210ENST00000493208 LENG9Q96B70 501 aa15.29■□□□□ 0.04
IRF1-210ENST00000493208 LARP6Q9BRS8 491 aaKnown RBP15.29■□□□□ 0.04
IRF1-210ENST00000493208 SEPT9Q9UHD8 586 aaPredicted RBP15.29■□□□□ 0.04
IRF1-210ENST00000493208 TET1Q8NFU7 2136 aa15.28■□□□□ 0.04
IRF1-210ENST00000493208 FSD2A1L4K1 749 aa15.28■□□□□ 0.04
IRF1-210ENST00000493208 H3BNC9 293 aa15.28■□□□□ 0.04
IRF1-210ENST00000493208 RFXAPO00287 272 aa15.28■□□□□ 0.04
IRF1-210ENST00000493208 PSMD10O75832 226 aa15.28■□□□□ 0.04
IRF1-210ENST00000493208 SARSP49591 514 aaKnown RBP15.28■□□□□ 0.04
IRF1-210ENST00000493208 PSMC5P62195 406 aa15.28■□□□□ 0.04
IRF1-210ENST00000493208 TCTN1Q2MV58 587 aa15.28■□□□□ 0.04
IRF1-210ENST00000493208 PUS10Q3MIT2 529 aaKnown RBP15.28■□□□□ 0.04
IRF1-210ENST00000493208 EFCAB12Q6NXP0 572 aa15.28■□□□□ 0.04
IRF1-210ENST00000493208 PIK3AP1Q6ZUJ8 805 aa15.28■□□□□ 0.04
IRF1-210ENST00000493208 SLC24A5Q71RS6 500 aa15.28■□□□□ 0.04
IRF1-210ENST00000493208 OTUD6AQ7L8S5 288 aa15.28■□□□□ 0.04
IRF1-210ENST00000493208 KIAA0319LQ8IZA0 1049 aa15.28■□□□□ 0.04
IRF1-210ENST00000493208 UNC45AQ9H3U1 944 aa15.28■□□□□ 0.04
IRF1-210ENST00000493208 DACT1Q9NYF0 836 aa15.28■□□□□ 0.04
IRF1-210ENST00000493208 KIF3AQ9Y496 699 aa15.28■□□□□ 0.04
IRF1-210ENST00000493208 CDH23Q9H251 3354 aa15.28■□□□□ 0.04
IRF1-210ENST00000493208 M0R2N6 131 aa15.27■□□□□ 0.04
IRF1-210ENST00000493208 TDP2O95551 362 aa15.27■□□□□ 0.04
IRF1-210ENST00000493208 SPOUT1Q5T280 376 aaKnown RBP15.27■□□□□ 0.04
IRF1-210ENST00000493208 ABI1Q8IZP0 508 aa15.27■□□□□ 0.04
IRF1-210ENST00000493208 SLC7A3Q8WY07 619 aa15.27■□□□□ 0.04
IRF1-210ENST00000493208 ZSCAN31Q96LW9 406 aaPredicted RBP15.27■□□□□ 0.04
IRF1-210ENST00000493208 CCDC43Q96MW1 224 aaKnown RBP15.27■□□□□ 0.04
IRF1-210ENST00000493208 MBOAT7Q96N66 472 aa15.27■□□□□ 0.04
IRF1-210ENST00000493208 C17orf80Q9BSJ5 609 aa15.27■□□□□ 0.04
IRF1-210ENST00000493208 KCNJ14Q9UNX9 436 aa15.27■□□□□ 0.04
IRF1-210ENST00000493208 LIMCH1Q9UPQ0 1083 aa15.27■□□□□ 0.04
IRF1-210ENST00000493208 PCDHB12Q9Y5F1 795 aa15.27■□□□□ 0.04
IRF1-210ENST00000493208 MICAL3Q7RTP6 2002 aa15.26■□□□□ 0.03
IRF1-210ENST00000493208 C5orf67F2Z3F1 127 aa15.26■□□□□ 0.03
IRF1-210ENST00000493208 TNFRSF10AO00220 468 aa15.26■□□□□ 0.03
IRF1-210ENST00000493208 GAS2O43903 313 aaKnown RBP15.26■□□□□ 0.03
IRF1-210ENST00000493208 DGKIO75912 1065 aa15.26■□□□□ 0.03
IRF1-210ENST00000493208 P4HBP07237 508 aaKnown RBP15.26■□□□□ 0.03
IRF1-210ENST00000493208 SKIP12755 728 aa15.26■□□□□ 0.03
IRF1-210ENST00000493208 SFPQP23246 707 aaKnown RBP eCLIP15.26■□□□□ 0.03
IRF1-210ENST00000493208 BMPR1AP36894 532 aa15.26■□□□□ 0.03
IRF1-210ENST00000493208 QARSP47897 775 aaKnown RBP15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms