RNA–Protein interactions for RNA: ENST00000493039.5

CSTF1-206, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 5

Gene CSTF1, Length 2,234 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-206ENST00000493039 SH3RF1Q7Z6J0 888 aa10.46□□□□□ -0.74
CSTF1-206ENST00000493039 GRAMD1CQ8IYS0 662 aa10.46□□□□□ -0.74
CSTF1-206ENST00000493039 IQUBQ8NA54 791 aa10.46□□□□□ -0.74
CSTF1-206ENST00000493039 RAD54LQ92698 747 aa10.46□□□□□ -0.74
CSTF1-206ENST00000493039 ATP6V0A1Q93050 837 aa10.46□□□□□ -0.74
CSTF1-206ENST00000493039 CALML4Q96GE6 196 aa10.46□□□□□ -0.74
CSTF1-206ENST00000493039 NACC1Q96RE7 527 aa10.46□□□□□ -0.74
CSTF1-206ENST00000493039 CRISPLD2Q9H0B8 497 aa10.46□□□□□ -0.74
CSTF1-206ENST00000493039 NT5C3AQ9H0P0 336 aa10.46□□□□□ -0.74
CSTF1-206ENST00000493039 SMARCAD1Q9H4L7 1026 aa10.46□□□□□ -0.74
CSTF1-206ENST00000493039 KBTBD4Q9NVX7 518 aa10.46□□□□□ -0.74
CSTF1-206ENST00000493039 STK24Q9Y6E0 443 aa10.46□□□□□ -0.74
CSTF1-206ENST00000493039 KDM3AQ9Y4C1 1321 aa10.45□□□□□ -0.74
CSTF1-206ENST00000493039 GJB1P08034 283 aa10.45□□□□□ -0.74
CSTF1-206ENST00000493039 XRCC6P12956 609 aaKnown RBP eCLIP10.45□□□□□ -0.74
CSTF1-206ENST00000493039 CASP1P29466 404 aa10.45□□□□□ -0.74
CSTF1-206ENST00000493039 TXLNAP40222 546 aa10.45□□□□□ -0.74
CSTF1-206ENST00000493039 RARRES1P49788 294 aa10.45□□□□□ -0.74
CSTF1-206ENST00000493039 XKR3Q5GH77 459 aa10.45□□□□□ -0.74
CSTF1-206ENST00000493039 KRBA2Q6ZNG9 492 aa10.45□□□□□ -0.74
CSTF1-206ENST00000493039 ATP8B4Q8TF62 1192 aa10.45□□□□□ -0.74
CSTF1-206ENST00000493039 NIFKQ9BYG3 293 aaKnown RBP10.45□□□□□ -0.74
CSTF1-206ENST00000493039 BHMT2Q9H2M3 363 aa10.45□□□□□ -0.74
CSTF1-206ENST00000493039 AZI2Q9H6S1 392 aa10.45□□□□□ -0.74
CSTF1-206ENST00000493039 ERAP1Q9NZ08 941 aa10.45□□□□□ -0.74
CSTF1-206ENST00000493039 CCDC39Q9UFE4 941 aa10.45□□□□□ -0.74
CSTF1-206ENST00000493039 EYA4O95677 639 aa10.45□□□□□ -0.74
CSTF1-206ENST00000493039 OATP04181 439 aa10.45□□□□□ -0.74
CSTF1-206ENST00000493039 MYL3P08590 195 aa10.45□□□□□ -0.74
CSTF1-206ENST00000493039 PLA2G4BP0C869 781 aa10.45□□□□□ -0.74
CSTF1-206ENST00000493039 STAT6P42226 847 aa10.45□□□□□ -0.74
CSTF1-206ENST00000493039 FAM160B1Q5W0V3 765 aa10.45□□□□□ -0.74
CSTF1-206ENST00000493039 OTUD6BQ8N6M0 293 aa10.45□□□□□ -0.74
CSTF1-206ENST00000493039 U2AF1L4Q8WU68 220 aaKnown RBP10.45□□□□□ -0.74
CSTF1-206ENST00000493039 LARP4BQ92615 738 aaKnown RBP10.45□□□□□ -0.74
CSTF1-206ENST00000493039 ZBTB10Q96DT7 871 aa10.45□□□□□ -0.74
CSTF1-206ENST00000493039 PAGE5Q96GU1 130 aa10.45□□□□□ -0.74
CSTF1-206ENST00000493039 SPC25Q9HBM1 224 aa10.45□□□□□ -0.74
CSTF1-206ENST00000493039 PDLIM7Q9NR12 457 aa10.45□□□□□ -0.74
CSTF1-206ENST00000493039 DBR1Q9UK59 544 aaKnown RBP10.45□□□□□ -0.74
CSTF1-206ENST00000493039 DNM3Q9UQ16 869 aa10.45□□□□□ -0.74
CSTF1-206ENST00000493039 SGPL1O95470 568 aa10.44□□□□□ -0.74
CSTF1-206ENST00000493039 SLC26A2P50443 739 aa10.44□□□□□ -0.74
CSTF1-206ENST00000493039 ACLYP53396 1101 aa10.44□□□□□ -0.74
CSTF1-206ENST00000493039 KIAA0753Q2KHM9 967 aa10.44□□□□□ -0.74
CSTF1-206ENST00000493039 MARCH8Q5T0T0 291 aa10.44□□□□□ -0.74
CSTF1-206ENST00000493039 RNF180Q86T96 592 aa10.44□□□□□ -0.74
CSTF1-206ENST00000493039 SYT2Q8N9I0 419 aaPredicted RBP10.44□□□□□ -0.74
CSTF1-206ENST00000493039 RASSF8Q8NHQ8 419 aa10.44□□□□□ -0.74
CSTF1-206ENST00000493039 TRAPPC12Q8WVT3 735 aa10.44□□□□□ -0.74
CSTF1-206ENST00000493039 ERCC4Q92889 916 aaPredicted RBP10.44□□□□□ -0.74
CSTF1-206ENST00000493039 CDK5RAP3Q96JB5 506 aa10.44□□□□□ -0.74
CSTF1-206ENST00000493039 TIGD1Q96MW7 591 aa10.44□□□□□ -0.74
CSTF1-206ENST00000493039 RUSC1Q9BVN2 902 aa10.44□□□□□ -0.74
CSTF1-206ENST00000493039 POLD4Q9HCU8 107 aa10.44□□□□□ -0.74
CSTF1-206ENST00000493039 ANKEF1Q9NU02 776 aa10.44□□□□□ -0.74
CSTF1-206ENST00000493039 TMEM63CQ9P1W3 806 aa10.44□□□□□ -0.74
CSTF1-206ENST00000493039 STK17AQ9UEE5 414 aa10.44□□□□□ -0.74
CSTF1-206ENST00000493039 WDR81Q562E7 1941 aa10.44□□□□□ -0.74
CSTF1-206ENST00000493039 MYMKA6NI61 221 aa10.43□□□□□ -0.74
CSTF1-206ENST00000493039 INSRRP14616 1297 aa10.43□□□□□ -0.74
CSTF1-206ENST00000493039 CYP11B2P19099 503 aa10.43□□□□□ -0.74
CSTF1-206ENST00000493039 ADAM17P78536 824 aa10.43□□□□□ -0.74
CSTF1-206ENST00000493039 DHX8Q14562 1220 aaKnown RBP10.43□□□□□ -0.74
CSTF1-206ENST00000493039 KLHL40Q2TBA0 621 aa10.43□□□□□ -0.74
CSTF1-206ENST00000493039 BRDTQ58F21 947 aaPredicted RBP10.43□□□□□ -0.74
CSTF1-206ENST00000493039 COL13A1Q5TAT6 717 aaPredicted RBP10.43□□□□□ -0.74
CSTF1-206ENST00000493039 RINT1Q6NUQ1 792 aa10.43□□□□□ -0.74
CSTF1-206ENST00000493039 C1orf186Q6ZWK4 172 aa10.43□□□□□ -0.74
CSTF1-206ENST00000493039 CYP26B1Q9NR63 512 aa10.43□□□□□ -0.74
CSTF1-206ENST00000493039 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.43□□□□□ -0.74
CSTF1-206ENST00000493039 NPHP3-ACAD11A0A0J9YXS1 232 aa10.43□□□□□ -0.74
CSTF1-206ENST00000493039 RBAK-RBAKDNI3L0D1 243 aa10.43□□□□□ -0.74
CSTF1-206ENST00000493039 TRAK2O60296 914 aa10.43□□□□□ -0.74
CSTF1-206ENST00000493039 KPNA6O60684 536 aa10.43□□□□□ -0.74
CSTF1-206ENST00000493039 PRR29P0C7W0 189 aa10.43□□□□□ -0.74
CSTF1-206ENST00000493039 HOXC8P31273 242 aa10.43□□□□□ -0.74
CSTF1-206ENST00000493039 AFMP43652 599 aa10.43□□□□□ -0.74
CSTF1-206ENST00000493039 GJA8P48165 433 aa10.43□□□□□ -0.74
CSTF1-206ENST00000493039 PSEN2P49810 448 aa10.43□□□□□ -0.74
CSTF1-206ENST00000493039 MFSD10Q14728 455 aa10.43□□□□□ -0.74
CSTF1-206ENST00000493039 CAMK4Q16566 473 aa10.43□□□□□ -0.74
CSTF1-206ENST00000493039 CKAP2LQ8IYA6 745 aa10.43□□□□□ -0.74
CSTF1-206ENST00000493039 PCSK9Q8NBP7 692 aaKnown RBP10.43□□□□□ -0.74
CSTF1-206ENST00000493039 ARRDC4Q8NCT1 418 aa10.43□□□□□ -0.74
CSTF1-206ENST00000493039 CNNM3Q8NE01 707 aa10.43□□□□□ -0.74
CSTF1-206ENST00000493039 DNAJC19Q96DA6 116 aa10.43□□□□□ -0.74
CSTF1-206ENST00000493039 CTAGE1Q96RT6 745 aa10.43□□□□□ -0.74
CSTF1-206ENST00000493039 TSEN34Q9BSV6 310 aaKnown RBP10.43□□□□□ -0.74
CSTF1-206ENST00000493039 MTG1Q9BT17 334 aaPredicted RBP10.43□□□□□ -0.74
CSTF1-206ENST00000493039 XPNPEP1Q9NQW7 623 aa10.43□□□□□ -0.74
CSTF1-206ENST00000493039 SEPT9Q9UHD8 586 aaPredicted RBP10.43□□□□□ -0.74
CSTF1-206ENST00000493039 HBP1O60381 514 aa10.42□□□□□ -0.74
CSTF1-206ENST00000493039 MBD3O95983 291 aa10.42□□□□□ -0.74
CSTF1-206ENST00000493039 SMIM10L2AP0DMW4 78 aa10.42□□□□□ -0.74
CSTF1-206ENST00000493039 SMIM10L2BP0DMW5 78 aa10.42□□□□□ -0.74
CSTF1-206ENST00000493039 SOX10P56693 466 aa10.42□□□□□ -0.74
CSTF1-206ENST00000493039 ZNF200P98182 395 aaPredicted RBP10.42□□□□□ -0.74
CSTF1-206ENST00000493039 MKRN4PQ13434 485 aaPredicted RBP10.42□□□□□ -0.74
CSTF1-206ENST00000493039 CUL4BQ13620 913 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms