RNA–Protein interactions for RNA: ENST00000492859.5

BRCA1-220, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-220ENST00000492859 B4GALNT4Q76KP1 1039 aa4.65□□□□□ -1.67
BRCA1-220ENST00000492859 ZNF598Q86UK7 904 aaKnown RBP4.65□□□□□ -1.67
BRCA1-220ENST00000492859 HEATR4Q86WZ0 1026 aa4.65□□□□□ -1.67
BRCA1-220ENST00000492859 LRRC47Q8N1G4 583 aaKnown RBP4.65□□□□□ -1.67
BRCA1-220ENST00000492859 CPA6Q8N4T0 437 aa4.65□□□□□ -1.67
BRCA1-220ENST00000492859 CCDC33Q8N5R6 958 aa4.65□□□□□ -1.67
BRCA1-220ENST00000492859 ANKRD53Q8N9V6 530 aa4.65□□□□□ -1.67
BRCA1-220ENST00000492859 PCSK9Q8NBP7 692 aaKnown RBP4.65□□□□□ -1.67
BRCA1-220ENST00000492859 DEPTORQ8TB45 409 aa4.65□□□□□ -1.67
BRCA1-220ENST00000492859 FERMT2Q96AC1 680 aa4.65□□□□□ -1.67
BRCA1-220ENST00000492859 ZNF845Q96IR2 970 aaPredicted RBP4.65□□□□□ -1.67
BRCA1-220ENST00000492859 VPS39Q96JC1 886 aa4.65□□□□□ -1.67
BRCA1-220ENST00000492859 SPATA17Q96L03 361 aa4.65□□□□□ -1.67
BRCA1-220ENST00000492859 TCEANC2Q96MN5 208 aa4.65□□□□□ -1.67
BRCA1-220ENST00000492859 FAM193BQ96PV7 902 aaPredicted RBP4.65□□□□□ -1.67
BRCA1-220ENST00000492859 SH3GL3Q99963 347 aa4.65□□□□□ -1.67
BRCA1-220ENST00000492859 TREX2Q9BQ50 279 aaPredicted RBP4.65□□□□□ -1.67
BRCA1-220ENST00000492859 DDX23Q9BUQ8 820 aaKnown RBP4.65□□□□□ -1.67
BRCA1-220ENST00000492859 SAP130Q9H0E3 1048 aa4.65□□□□□ -1.67
BRCA1-220ENST00000492859 SMOC1Q9H4F8 434 aa4.65□□□□□ -1.67
BRCA1-220ENST00000492859 HPS4Q9NQG7 708 aa4.65□□□□□ -1.67
BRCA1-220ENST00000492859 PICK1Q9NRD5 415 aa4.65□□□□□ -1.67
BRCA1-220ENST00000492859 ANKIB1Q9P2G1 1089 aa4.65□□□□□ -1.67
BRCA1-220ENST00000492859 CHORDC1Q9UHD1 332 aaPredicted RBP4.65□□□□□ -1.67
BRCA1-220ENST00000492859 CDC23Q9UJX2 597 aa4.65□□□□□ -1.67
BRCA1-220ENST00000492859 CAB39Q9Y376 341 aaPredicted RBP4.65□□□□□ -1.67
BRCA1-220ENST00000492859 RTCBQ9Y3I0 505 aaKnown RBP4.65□□□□□ -1.67
BRCA1-220ENST00000492859 ZNF711Q9Y462 761 aa4.65□□□□□ -1.67
BRCA1-220ENST00000492859 GNAT3A8MTJ3 354 aa4.64□□□□□ -1.67
BRCA1-220ENST00000492859 NRG2O14511 850 aaPredicted RBP4.64□□□□□ -1.67
BRCA1-220ENST00000492859 FSCN2O14926 492 aa4.64□□□□□ -1.67
BRCA1-220ENST00000492859 NOS3P29474 1203 aa4.64□□□□□ -1.67
BRCA1-220ENST00000492859 ACTN2P35609 894 aa4.64□□□□□ -1.67
BRCA1-220ENST00000492859 PSMC4P43686 418 aa4.64□□□□□ -1.67
BRCA1-220ENST00000492859 CLNS1AP54105 237 aaKnown RBP4.64□□□□□ -1.67
BRCA1-220ENST00000492859 TUBA1BP68363 451 aa4.64□□□□□ -1.67
BRCA1-220ENST00000492859 GTF2IP78347 998 aa4.64□□□□□ -1.67
BRCA1-220ENST00000492859 ZNF252P-AS1Q0IIN9 211 aa4.64□□□□□ -1.67
BRCA1-220ENST00000492859 ORC1Q13415 861 aa4.64□□□□□ -1.67
BRCA1-220ENST00000492859 NAA25Q14CX7 972 aa4.64□□□□□ -1.67
BRCA1-220ENST00000492859 STK11Q15831 433 aa4.64□□□□□ -1.67
BRCA1-220ENST00000492859 EMC10Q5UCC4 262 aa4.64□□□□□ -1.67
BRCA1-220ENST00000492859 CORO6Q6QEF8 472 aa4.64□□□□□ -1.67
BRCA1-220ENST00000492859 TUBA1AQ71U36 451 aa4.64□□□□□ -1.67
BRCA1-220ENST00000492859 RSPH3Q86UC2 560 aa4.64□□□□□ -1.67
BRCA1-220ENST00000492859 PPFIBP1Q86W92 1011 aa4.64□□□□□ -1.67
BRCA1-220ENST00000492859 NUP93Q8N1F7 819 aa4.64□□□□□ -1.67
BRCA1-220ENST00000492859 ANKRD35Q8N283 1001 aa4.64□□□□□ -1.67
BRCA1-220ENST00000492859 ST13P5Q8NFI4 369 aaPredicted RBP4.64□□□□□ -1.67
BRCA1-220ENST00000492859 RNF139Q8WU17 664 aa4.64□□□□□ -1.67
BRCA1-220ENST00000492859 UCMAQ8WVF2 138 aa4.64□□□□□ -1.67
BRCA1-220ENST00000492859 BSNDQ8WZ55 320 aa4.64□□□□□ -1.67
BRCA1-220ENST00000492859 RBM17Q96I25 401 aaKnown RBP4.64□□□□□ -1.67
BRCA1-220ENST00000492859 C16orf45Q96MC5 204 aaPredicted RBP4.64□□□□□ -1.67
BRCA1-220ENST00000492859 TBCBQ99426 244 aa4.64□□□□□ -1.67
BRCA1-220ENST00000492859 CCDC106Q9BWC9 280 aa4.64□□□□□ -1.67
BRCA1-220ENST00000492859 STK31Q9BXU1 1019 aa4.64□□□□□ -1.67
BRCA1-220ENST00000492859 EHD1Q9H4M9 534 aa4.64□□□□□ -1.67
BRCA1-220ENST00000492859 SYNCQ9H7C4 482 aa4.64□□□□□ -1.67
BRCA1-220ENST00000492859 EHMT1Q9H9B1 1298 aa4.64□□□□□ -1.67
BRCA1-220ENST00000492859 POLMQ9NP87 494 aaPredicted RBP4.64□□□□□ -1.67
BRCA1-220ENST00000492859 SEPT11Q9NVA2 429 aaKnown RBP4.64□□□□□ -1.67
BRCA1-220ENST00000492859 LMCD1Q9NZU5 365 aa4.64□□□□□ -1.67
BRCA1-220ENST00000492859 PCDHB12Q9Y5F1 795 aa4.64□□□□□ -1.67
BRCA1-220ENST00000492859 FLT1P17948 1338 aa4.63□□□□□ -1.67
BRCA1-220ENST00000492859 NSD2O96028 1365 aa4.63□□□□□ -1.67
BRCA1-220ENST00000492859 ZSCAN5CA6NGD5 496 aaPredicted RBP4.63□□□□□ -1.67
BRCA1-220ENST00000492859 A6NLC8 198 aa4.63□□□□□ -1.67
BRCA1-220ENST00000492859 CCDC169A6NNP5 214 aa4.63□□□□□ -1.67
BRCA1-220ENST00000492859 MINDY4BA8MYZ0 360 aa4.63□□□□□ -1.67
BRCA1-220ENST00000492859 FZD9O00144 591 aa4.63□□□□□ -1.67
BRCA1-220ENST00000492859 TPP1O14773 563 aa4.63□□□□□ -1.67
BRCA1-220ENST00000492859 CETN3O15182 167 aa4.63□□□□□ -1.67
BRCA1-220ENST00000492859 TXNL1O43396 289 aa4.63□□□□□ -1.67
BRCA1-220ENST00000492859 DAB1O75553 588 aa4.63□□□□□ -1.67
BRCA1-220ENST00000492859 PAPLNO95428 1278 aa4.63□□□□□ -1.67
BRCA1-220ENST00000492859 LARGE1O95461 756 aa4.63□□□□□ -1.67
BRCA1-220ENST00000492859 NPPAP01160 153 aa4.63□□□□□ -1.67
BRCA1-220ENST00000492859 OPN1MWP04001 364 aa4.63□□□□□ -1.67
BRCA1-220ENST00000492859 POLBP06746 335 aa4.63□□□□□ -1.67
BRCA1-220ENST00000492859 CLTBP09497 229 aa4.63□□□□□ -1.67
BRCA1-220ENST00000492859 OPN1MW2P0DN77 364 aa4.63□□□□□ -1.67
BRCA1-220ENST00000492859 OPN1MW3P0DN78 364 aa4.63□□□□□ -1.67
BRCA1-220ENST00000492859 GAP43P17677 238 aa4.63□□□□□ -1.67
BRCA1-220ENST00000492859 CNTFP26441 200 aa4.63□□□□□ -1.67
BRCA1-220ENST00000492859 IDUAP35475 653 aa4.63□□□□□ -1.67
BRCA1-220ENST00000492859 MAP2K2P36507 400 aa4.63□□□□□ -1.67
BRCA1-220ENST00000492859 EIF4A3P38919 411 aaKnown RBP4.63□□□□□ -1.67
BRCA1-220ENST00000492859 MTIF2P46199 727 aaKnown RBP4.63□□□□□ -1.67
BRCA1-220ENST00000492859 IFNAR2P48551 515 aa4.63□□□□□ -1.67
BRCA1-220ENST00000492859 CCT8P50990 548 aa4.63□□□□□ -1.67
BRCA1-220ENST00000492859 ALDH3A2P51648 485 aa4.63□□□□□ -1.67
BRCA1-220ENST00000492859 YBEYP58557 167 aaPredicted RBP4.63□□□□□ -1.67
BRCA1-220ENST00000492859 COG7P83436 770 aa4.63□□□□□ -1.67
BRCA1-220ENST00000492859 PPARDQ03181 441 aa4.63□□□□□ -1.67
BRCA1-220ENST00000492859 NFIAQ12857 509 aa4.63□□□□□ -1.67
BRCA1-220ENST00000492859 NR5A1Q13285 461 aa4.63□□□□□ -1.67
BRCA1-220ENST00000492859 ADAM15Q13444 863 aa4.63□□□□□ -1.67
BRCA1-220ENST00000492859 MBTPS1Q14703 1052 aa4.63□□□□□ -1.67
BRCA1-220ENST00000492859 CTC1Q2NKJ3 1217 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms