RNA–Protein interactions for RNA: ENST00000492851.1

COL6A1-205, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-205ENST00000492851 DEXIO95424 95 aa14.1□□□□□ -0.15
COL6A1-205ENST00000492851 SFNP31947 248 aa14.1□□□□□ -0.15
COL6A1-205ENST00000492851 CRYBB1P53674 252 aaPredicted RBP14.1□□□□□ -0.15
COL6A1-205ENST00000492851 CCT2P78371 535 aaKnown RBP14.1□□□□□ -0.15
COL6A1-205ENST00000492851 TMEM62Q0P6H9 643 aa14.1□□□□□ -0.15
COL6A1-205ENST00000492851 NFX1Q12986 1120 aaKnown RBP14.1□□□□□ -0.15
COL6A1-205ENST00000492851 KIAA0319LQ8IZA0 1049 aa14.1□□□□□ -0.15
COL6A1-205ENST00000492851 PPP2R3CQ969Q6 453 aa14.1□□□□□ -0.15
COL6A1-205ENST00000492851 RC3H2Q9HBD1 1191 aaKnown RBP14.1□□□□□ -0.15
COL6A1-205ENST00000492851 PCDHB7Q9Y5E2 793 aa14.1□□□□□ -0.15
COL6A1-205ENST00000492851 MYO9BQ13459 2157 aa14.1□□□□□ -0.15
COL6A1-205ENST00000492851 MICAL3Q7RTP6 2002 aa14.09□□□□□ -0.15
COL6A1-205ENST00000492851 KCNA5P22460 613 aa14.09□□□□□ -0.15
COL6A1-205ENST00000492851 CDC42EP1Q00587 391 aa14.09□□□□□ -0.15
COL6A1-205ENST00000492851 RTN4RL1Q86UN2 441 aaPredicted RBP14.09□□□□□ -0.15
COL6A1-205ENST00000492851 CRIPAKQ8N1N5 446 aa14.09□□□□□ -0.15
COL6A1-205ENST00000492851 RDM1Q8NG50 284 aa14.09□□□□□ -0.15
COL6A1-205ENST00000492851 ZBTB10Q96DT7 871 aa14.09□□□□□ -0.15
COL6A1-205ENST00000492851 PABPC5Q96DU9 382 aaKnown RBP14.09□□□□□ -0.15
COL6A1-205ENST00000492851 VPS54Q9P1Q0 977 aa14.09□□□□□ -0.15
COL6A1-205ENST00000492851 GABBR1Q9UBS5 961 aa14.09□□□□□ -0.15
COL6A1-205ENST00000492851 PCDHA4Q9UN74 947 aa14.09□□□□□ -0.15
COL6A1-205ENST00000492851 GINS2Q9Y248 185 aa14.09□□□□□ -0.15
COL6A1-205ENST00000492851 DOCK5Q9H7D0 1870 aa14.09□□□□□ -0.15
COL6A1-205ENST00000492851 PRRC2BQ5JSZ5 2229 aaKnown RBP14.09□□□□□ -0.15
COL6A1-205ENST00000492851 XIRP2A4UGR9 3374 aa14.08□□□□□ -0.15
COL6A1-205ENST00000492851 DENND3A2RUS2 1198 aa14.08□□□□□ -0.16
COL6A1-205ENST00000492851 GAS7O60861 476 aa14.08□□□□□ -0.16
COL6A1-205ENST00000492851 CDKL5O76039 1030 aa14.08□□□□□ -0.16
COL6A1-205ENST00000492851 XBP1P17861 261 aa14.08□□□□□ -0.16
COL6A1-205ENST00000492851 ATP4AP20648 1035 aa14.08□□□□□ -0.16
COL6A1-205ENST00000492851 SARSP49591 514 aaKnown RBP14.08□□□□□ -0.16
COL6A1-205ENST00000492851 JAK3P52333 1124 aa14.08□□□□□ -0.16
COL6A1-205ENST00000492851 SLC24A5Q71RS6 500 aa14.08□□□□□ -0.16
COL6A1-205ENST00000492851 METTL13Q8N6R0 699 aa14.08□□□□□ -0.16
COL6A1-205ENST00000492851 NEK9Q8TD19 979 aa14.08□□□□□ -0.16
COL6A1-205ENST00000492851 NECAB3Q96P71 396 aaPredicted RBP14.08□□□□□ -0.16
COL6A1-205ENST00000492851 MAP7D2Q96T17 732 aa14.08□□□□□ -0.16
COL6A1-205ENST00000492851 AAASQ9NRG9 546 aa14.08□□□□□ -0.16
COL6A1-205ENST00000492851 DISC1Q9NRI5 854 aa14.08□□□□□ -0.16
COL6A1-205ENST00000492851 RGS18Q9NS28 235 aa14.08□□□□□ -0.16
COL6A1-205ENST00000492851 TTC28Q96AY4 2481 aa14.08□□□□□ -0.16
COL6A1-205ENST00000492851 KAT6AQ92794 2004 aa14.08□□□□□ -0.16
COL6A1-205ENST00000492851 SIP14410 1827 aa14.08□□□□□ -0.16
COL6A1-205ENST00000492851 CYP3A7-CYP3A51PA0A087WV96 503 aa14.07□□□□□ -0.16
COL6A1-205ENST00000492851 C22orf31O95567 290 aa14.07□□□□□ -0.16
COL6A1-205ENST00000492851 CYP3A7P24462 503 aa14.07□□□□□ -0.16
COL6A1-205ENST00000492851 TOB2Q14106 344 aaPredicted RBP14.07□□□□□ -0.16
COL6A1-205ENST00000492851 COL19A1Q14993 1142 aa14.07□□□□□ -0.16
COL6A1-205ENST00000492851 CSPP1Q1MSJ5 1256 aa14.07□□□□□ -0.16
COL6A1-205ENST00000492851 Q4G0T1 1027 aa14.07□□□□□ -0.16
COL6A1-205ENST00000492851 TCEAL5Q5H9L2 206 aa14.07□□□□□ -0.16
COL6A1-205ENST00000492851 LRCH2Q5VUJ6 765 aa14.07□□□□□ -0.16
COL6A1-205ENST00000492851 PTCRAQ6ISU1 281 aaPredicted RBP14.07□□□□□ -0.16
COL6A1-205ENST00000492851 MOXD1Q6UVY6 613 aa14.07□□□□□ -0.16
COL6A1-205ENST00000492851 BLIDQ8IZY5 108 aa14.07□□□□□ -0.16
COL6A1-205ENST00000492851 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.07□□□□□ -0.16
COL6A1-205ENST00000492851 LINC01599Q8WXQ3 324 aa14.07□□□□□ -0.16
COL6A1-205ENST00000492851 SLC5A5Q92911 643 aa14.07□□□□□ -0.16
COL6A1-205ENST00000492851 TEKT3Q9BXF9 490 aa14.07□□□□□ -0.16
COL6A1-205ENST00000492851 ELAC1Q9H777 363 aaKnown RBP14.07□□□□□ -0.16
COL6A1-205ENST00000492851 NCOA5Q9HCD5 579 aaKnown RBP14.07□□□□□ -0.16
COL6A1-205ENST00000492851 ERVK-5Q9HDB9 667 aa14.07□□□□□ -0.16
COL6A1-205ENST00000492851 PDRG1Q9NUG6 133 aa14.07□□□□□ -0.16
COL6A1-205ENST00000492851 ST3GAL5Q9UNP4 418 aa14.07□□□□□ -0.16
COL6A1-205ENST00000492851 PLAGL2Q9UPG8 496 aa14.07□□□□□ -0.16
COL6A1-205ENST00000492851 NOC2LQ9Y3T9 749 aaKnown RBP14.07□□□□□ -0.16
COL6A1-205ENST00000492851 GRXCR2A6NFK2 248 aa14.06□□□□□ -0.16
COL6A1-205ENST00000492851 ZBTB42B2RXF5 422 aa14.06□□□□□ -0.16
COL6A1-205ENST00000492851 MSH4O15457 936 aa14.06□□□□□ -0.16
COL6A1-205ENST00000492851 MMP1P03956 469 aa14.06□□□□□ -0.16
COL6A1-205ENST00000492851 OATP04181 439 aa14.06□□□□□ -0.16
COL6A1-205ENST00000492851 LINC00271P0C7V0 271 aa14.06□□□□□ -0.16
COL6A1-205ENST00000492851 ZSCAN20P17040 1043 aaPredicted RBP14.06□□□□□ -0.16
COL6A1-205ENST00000492851 EFCAB12Q6NXP0 572 aa14.06□□□□□ -0.16
COL6A1-205ENST00000492851 DAGLBQ8NCG7 672 aa14.06□□□□□ -0.16
COL6A1-205ENST00000492851 RASGRP4Q8TDF6 673 aa14.06□□□□□ -0.16
COL6A1-205ENST00000492851 TBCKQ8TEA7 893 aa14.06□□□□□ -0.16
COL6A1-205ENST00000492851 LENG9Q96B70 501 aa14.06□□□□□ -0.16
COL6A1-205ENST00000492851 ADAM2Q99965 735 aa14.06□□□□□ -0.16
COL6A1-205ENST00000492851 TMX1Q9H3N1 280 aa14.06□□□□□ -0.16
COL6A1-205ENST00000492851 PRKAG3Q9UGI9 489 aa14.06□□□□□ -0.16
COL6A1-205ENST00000492851 PCDHB12Q9Y5F1 795 aa14.06□□□□□ -0.16
COL6A1-205ENST00000492851 COL4A4P53420 1690 aaPredicted RBP14.06□□□□□ -0.16
COL6A1-205ENST00000492851 FSD2A1L4K1 749 aa14.05□□□□□ -0.16
COL6A1-205ENST00000492851 GRM6O15303 877 aa14.05□□□□□ -0.16
COL6A1-205ENST00000492851 HOXA2O43364 376 aa14.05□□□□□ -0.16
COL6A1-205ENST00000492851 GPR32O75388 356 aa14.05□□□□□ -0.16
COL6A1-205ENST00000492851 COL9A1P20849 921 aa14.05□□□□□ -0.16
COL6A1-205ENST00000492851 FAM189BP81408 668 aa14.05□□□□□ -0.16
COL6A1-205ENST00000492851 UBE3AQ05086 875 aa14.05□□□□□ -0.16
COL6A1-205ENST00000492851 ANKRD1Q15327 319 aa14.05□□□□□ -0.16
COL6A1-205ENST00000492851 KIZQ2M2Z5 673 aa14.05□□□□□ -0.16
COL6A1-205ENST00000492851 TMEM266Q2M3C6 531 aa14.05□□□□□ -0.16
COL6A1-205ENST00000492851 ERICH6BQ5W0A0 696 aa14.05□□□□□ -0.16
COL6A1-205ENST00000492851 EP400NLQ6ZTU2 488 aa14.05□□□□□ -0.16
COL6A1-205ENST00000492851 KRT25Q7Z3Z0 450 aa14.05□□□□□ -0.16
COL6A1-205ENST00000492851 FAM178BQ8IXR5 827 aa14.05□□□□□ -0.16
COL6A1-205ENST00000492851 GJD3Q8N144 294 aa14.05□□□□□ -0.16
COL6A1-205ENST00000492851 NAP1L4Q99733 375 aaKnown RBP14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms