RNA–Protein interactions for RNA: ENST00000492545.1

CTDSP1-211, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 634 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-211ENST00000492545 GRB10Q13322 594 aa26.7■■□□□ 1.86
CTDSP1-211ENST00000492545 CCDC85BQ15834 202 aaPredicted RBP26.7■■□□□ 1.86
CTDSP1-211ENST00000492545 INF2Q27J81 1249 aa26.7■■□□□ 1.86
CTDSP1-211ENST00000492545 NEK8Q86SG6 692 aa26.7■■□□□ 1.86
CTDSP1-211ENST00000492545 NECAB1Q8N987 351 aa26.7■■□□□ 1.86
CTDSP1-211ENST00000492545 FAM20AQ96MK3 541 aa26.7■■□□□ 1.86
CTDSP1-211ENST00000492545 BRMS1Q9HCU9 246 aa26.7■■□□□ 1.86
CTDSP1-211ENST00000492545 C22orf31O95567 290 aa26.69■■□□□ 1.86
CTDSP1-211ENST00000492545 OATP04181 439 aa26.69■■□□□ 1.86
CTDSP1-211ENST00000492545 CD52P31358 61 aa26.69■■□□□ 1.86
CTDSP1-211ENST00000492545 TMEM62Q0P6H9 643 aa26.69■■□□□ 1.86
CTDSP1-211ENST00000492545 PAK2Q13177 524 aa26.69■■□□□ 1.86
CTDSP1-211ENST00000492545 LETM2Q2VYF4 491 aa26.69■■□□□ 1.86
CTDSP1-211ENST00000492545 B3GNT9Q6UX72 402 aa26.69■■□□□ 1.86
CTDSP1-211ENST00000492545 ETNPPLQ8TBG4 499 aa26.69■■□□□ 1.86
CTDSP1-211ENST00000492545 SYMPKQ92797 1274 aaKnown RBP26.69■■□□□ 1.86
CTDSP1-211ENST00000492545 UNC45AQ9H3U1 944 aa26.69■■□□□ 1.86
CTDSP1-211ENST00000492545 SUGCTQ9HAC7 445 aa26.69■■□□□ 1.86
CTDSP1-211ENST00000492545 PADI3Q9ULW8 664 aa26.69■■□□□ 1.86
CTDSP1-211ENST00000492545 FDPSP14324 419 aaKnown RBP26.68■■□□□ 1.86
CTDSP1-211ENST00000492545 TMOD1P28289 359 aa26.68■■□□□ 1.86
CTDSP1-211ENST00000492545 MIER3Q7Z3K6 550 aa26.68■■□□□ 1.86
CTDSP1-211ENST00000492545 THEGQ9P2T0 379 aa26.68■■□□□ 1.86
CTDSP1-211ENST00000492545 TBX3O15119 743 aa26.67■■□□□ 1.86
CTDSP1-211ENST00000492545 CHMP2AO43633 222 aa26.67■■□□□ 1.86
CTDSP1-211ENST00000492545 LPXNO60711 386 aa26.67■■□□□ 1.86
CTDSP1-211ENST00000492545 METTL13Q8N6R0 699 aa26.67■■□□□ 1.86
CTDSP1-211ENST00000492545 NSUN7Q8NE18 718 aaKnown RBP26.67■■□□□ 1.86
CTDSP1-211ENST00000492545 RNF216Q9NWF9 866 aaPredicted RBP26.67■■□□□ 1.86
CTDSP1-211ENST00000492545 PRRC2BQ5JSZ5 2229 aaKnown RBP26.67■■□□□ 1.86
CTDSP1-211ENST00000492545 MYH9P35579 1960 aaKnown RBP26.66■■□□□ 1.86
CTDSP1-211ENST00000492545 ZNF862O60290 1169 aa26.66■■□□□ 1.86
CTDSP1-211ENST00000492545 KRT2P35908 639 aa26.66■■□□□ 1.86
CTDSP1-211ENST00000492545 CRYBB1P53674 252 aaPredicted RBP26.66■■□□□ 1.86
CTDSP1-211ENST00000492545 PRKCEQ02156 737 aa26.66■■□□□ 1.86
CTDSP1-211ENST00000492545 TJAP1Q5JTD0 557 aa26.66■■□□□ 1.86
CTDSP1-211ENST00000492545 PIK3AP1Q6ZUJ8 805 aa26.66■■□□□ 1.86
CTDSP1-211ENST00000492545 MICALL1Q8N3F8 863 aa26.66■■□□□ 1.86
CTDSP1-211ENST00000492545 LIMCH1Q9UPQ0 1083 aa26.66■■□□□ 1.86
CTDSP1-211ENST00000492545 GPR182O15218 404 aa26.65■■□□□ 1.86
CTDSP1-211ENST00000492545 TRIM29Q14134 588 aa26.65■■□□□ 1.86
CTDSP1-211ENST00000492545 TRMT1LQ7Z2T5 733 aaKnown RBP26.65■■□□□ 1.86
CTDSP1-211ENST00000492545 SPRED2Q7Z698 418 aa26.65■■□□□ 1.86
CTDSP1-211ENST00000492545 FBXO22Q8NEZ5 403 aa26.65■■□□□ 1.86
CTDSP1-211ENST00000492545 MAP7D2Q96T17 732 aa26.65■■□□□ 1.86
CTDSP1-211ENST00000492545 COL25A1Q9BXS0 654 aaPredicted RBP26.65■■□□□ 1.86
CTDSP1-211ENST00000492545 NIFKQ9BYG3 293 aaKnown RBP26.65■■□□□ 1.86
CTDSP1-211ENST00000492545 KCNMB3Q9NPA1 279 aa26.65■■□□□ 1.86
CTDSP1-211ENST00000492545 GJB4Q9NTQ9 266 aa26.65■■□□□ 1.86
CTDSP1-211ENST00000492545 MTUS1Q9ULD2 1270 aa26.65■■□□□ 1.86
CTDSP1-211ENST00000492545 COL4A6Q14031 1691 aa26.65■■□□□ 1.86
CTDSP1-211ENST00000492545 RPS6KA5O75582 802 aa26.64■■□□□ 1.86
CTDSP1-211ENST00000492545 LARGE1O95461 756 aa26.64■■□□□ 1.86
CTDSP1-211ENST00000492545 MRPS5P82675 430 aaKnown RBP26.64■■□□□ 1.86
CTDSP1-211ENST00000492545 XKR3Q5GH77 459 aa26.64■■□□□ 1.86
CTDSP1-211ENST00000492545 FIBCD1Q8N539 461 aa26.64■■□□□ 1.86
CTDSP1-211ENST00000492545 OXER1Q8TDS5 423 aa26.64■■□□□ 1.86
CTDSP1-211ENST00000492545 GJA10Q969M2 543 aa26.64■■□□□ 1.86
CTDSP1-211ENST00000492545 C17orf80Q9BSJ5 609 aa26.64■■□□□ 1.86
CTDSP1-211ENST00000492545 GINS2Q9Y248 185 aa26.64■■□□□ 1.86
CTDSP1-211ENST00000492545 RWDD3Q9Y3V2 267 aa26.64■■□□□ 1.86
CTDSP1-211ENST00000492545 SLC37A4O43826 429 aa26.63■■□□□ 1.85
CTDSP1-211ENST00000492545 CCNT1O60563 726 aaKnown RBP26.63■■□□□ 1.85
CTDSP1-211ENST00000492545 DKC1O60832 514 aaKnown RBP eCLIP26.63■■□□□ 1.85
CTDSP1-211ENST00000492545 STAG3L1P0CL83 205 aa26.63■■□□□ 1.85
CTDSP1-211ENST00000492545 CDC42EP1Q00587 391 aa26.63■■□□□ 1.85
CTDSP1-211ENST00000492545 NFX1Q12986 1120 aaKnown RBP26.63■■□□□ 1.85
CTDSP1-211ENST00000492545 PPP2R5CQ13362 524 aa26.63■■□□□ 1.85
CTDSP1-211ENST00000492545 AAK1Q2M2I8 961 aa26.63■■□□□ 1.85
CTDSP1-211ENST00000492545 EPC2Q52LR7 807 aa26.63■■□□□ 1.85
CTDSP1-211ENST00000492545 EFCAB12Q6NXP0 572 aa26.63■■□□□ 1.85
CTDSP1-211ENST00000492545 RTN4RL1Q86UN2 441 aaPredicted RBP26.63■■□□□ 1.85
CTDSP1-211ENST00000492545 NPAS4Q8IUM7 802 aa26.63■■□□□ 1.85
CTDSP1-211ENST00000492545 ERVK-5Q9HDB9 667 aa26.63■■□□□ 1.85
CTDSP1-211ENST00000492545 TTC3P53804 2025 aa26.63■■□□□ 1.85
CTDSP1-211ENST00000492545 RBAK-RBAKDNI3L0D1 243 aa26.62■■□□□ 1.85
CTDSP1-211ENST00000492545 GPR32O75388 356 aa26.62■■□□□ 1.85
CTDSP1-211ENST00000492545 PSMC5P62195 406 aa26.62■■□□□ 1.85
CTDSP1-211ENST00000492545 TBC1D8BQ0IIM8 1120 aa26.62■■□□□ 1.85
CTDSP1-211ENST00000492545 TARBP2Q15633 366 aaKnown RBP26.62■■□□□ 1.85
CTDSP1-211ENST00000492545 UGCGQ16739 394 aa26.62■■□□□ 1.85
CTDSP1-211ENST00000492545 TMEM192Q8IY95 271 aa26.62■■□□□ 1.85
CTDSP1-211ENST00000492545 CRIPAKQ8N1N5 446 aa26.62■■□□□ 1.85
CTDSP1-211ENST00000492545 LINC01465Q8N7H1 131 aa26.62■■□□□ 1.85
CTDSP1-211ENST00000492545 GDPD5Q8WTR4 605 aa26.62■■□□□ 1.85
CTDSP1-211ENST00000492545 ZNF689Q96CS4 500 aaPredicted RBP26.62■■□□□ 1.85
CTDSP1-211ENST00000492545 ASB2Q96Q27 587 aa26.62■■□□□ 1.85
CTDSP1-211ENST00000492545 LLPHQ9BRT6 129 aaKnown RBP26.62■■□□□ 1.85
CTDSP1-211ENST00000492545 PRDM6Q9NQX0 595 aa26.62■■□□□ 1.85
CTDSP1-211ENST00000492545 COG5Q9UP83 839 aa26.62■■□□□ 1.85
CTDSP1-211ENST00000492545 VCANP13611 3396 aa26.61■■□□□ 1.85
CTDSP1-211ENST00000492545 MARCH6O60337 910 aa26.61■■□□□ 1.85
CTDSP1-211ENST00000492545 DGKIO75912 1065 aa26.61■■□□□ 1.85
CTDSP1-211ENST00000492545 BAG4O95429 457 aaKnown RBP26.61■■□□□ 1.85
CTDSP1-211ENST00000492545 MMP1P03956 469 aa26.61■■□□□ 1.85
CTDSP1-211ENST00000492545 RB1P06400 928 aa26.61■■□□□ 1.85
CTDSP1-211ENST00000492545 SKIV2LQ15477 1246 aaKnown RBP26.61■■□□□ 1.85
CTDSP1-211ENST00000492545 PTPROQ16827 1216 aa26.61■■□□□ 1.85
CTDSP1-211ENST00000492545 KIZQ2M2Z5 673 aa26.61■■□□□ 1.85
CTDSP1-211ENST00000492545 C8orf34Q49A92 452 aa26.61■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms