RNA–Protein interactions for RNA: ENST00000490910.5

CRNKL1-204, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,183 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-204ENST00000490910 WDR59Q6PJI9 974 aa12.18□□□□□ -0.46
CRNKL1-204ENST00000490910 APBB1IPQ7Z5R6 666 aaPredicted RBP12.18□□□□□ -0.46
CRNKL1-204ENST00000490910 SDCCAG8Q86SQ7 713 aaPredicted RBP12.18□□□□□ -0.46
CRNKL1-204ENST00000490910 ZBTB38Q8NAP3 1195 aaPredicted RBP12.18□□□□□ -0.46
CRNKL1-204ENST00000490910 PIK3R5Q8WYR1 880 aa12.18□□□□□ -0.46
CRNKL1-204ENST00000490910 UIMC1Q96RL1 719 aa12.18□□□□□ -0.46
CRNKL1-204ENST00000490910 CCSER1Q9C0I3 900 aa12.18□□□□□ -0.46
CRNKL1-204ENST00000490910 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.18□□□□□ -0.466e-6■■■■■ 48.1
CRNKL1-204ENST00000490910 THEGQ9P2T0 379 aa12.18□□□□□ -0.46
CRNKL1-204ENST00000490910 ARHGEF28Q8N1W1 1705 aaKnown RBP12.18□□□□□ -0.46
CRNKL1-204ENST00000490910 KAT6BQ8WYB5 2073 aa12.18□□□□□ -0.46
CRNKL1-204ENST00000490910 TTI2Q6NXR4 508 aa12.18□□□□□ -0.46
CRNKL1-204ENST00000490910 GOLPH3Q9H4A6 298 aa12.18□□□□□ -0.46
CRNKL1-204ENST00000490910 ARPP21Q9UBL0 812 aaPredicted RBP12.18□□□□□ -0.46
CRNKL1-204ENST00000490910 PCDHA12Q9UN75 941 aa12.18□□□□□ -0.46
CRNKL1-204ENST00000490910 DNM3Q9UQ16 869 aa12.18□□□□□ -0.46
CRNKL1-204ENST00000490910 TBX22Q9Y458 520 aa12.18□□□□□ -0.46
CRNKL1-204ENST00000490910 TXNRD1Q16881 649 aa12.17□□□□□ -0.46
CRNKL1-204ENST00000490910 ENAHQ8N8S7 591 aaPredicted RBP12.17□□□□□ -0.46
CRNKL1-204ENST00000490910 CEP70Q8NHQ1 597 aa12.17□□□□□ -0.46
CRNKL1-204ENST00000490910 PRCCQ92733 491 aaPredicted RBP12.17□□□□□ -0.46
CRNKL1-204ENST00000490910 HIC2Q96JB3 615 aa12.17□□□□□ -0.46
CRNKL1-204ENST00000490910 OVOS2A0A0J9YW53 1432 aa12.17□□□□□ -0.46
CRNKL1-204ENST00000490910 OVOS2Q6IE36 1432 aa12.17□□□□□ -0.46
CRNKL1-204ENST00000490910 F8VZ95 297 aa12.17□□□□□ -0.46
CRNKL1-204ENST00000490910 NOL3O60936 208 aaKnown RBP12.17□□□□□ -0.46
CRNKL1-204ENST00000490910 HAUS5O94927 633 aa12.17□□□□□ -0.46
CRNKL1-204ENST00000490910 SERPINB6P35237 376 aa12.17□□□□□ -0.46
CRNKL1-204ENST00000490910 VHLP40337 213 aa12.17□□□□□ -0.46
CRNKL1-204ENST00000490910 PFKFB3Q16875 520 aaPredicted RBP12.17□□□□□ -0.46
CRNKL1-204ENST00000490910 MAP3K21Q5TCX8 1036 aa12.17□□□□□ -0.46
CRNKL1-204ENST00000490910 COL23A1Q86Y22 540 aaPredicted RBP12.17□□□□□ -0.46
CRNKL1-204ENST00000490910 DTX3LQ8TDB6 740 aa12.17□□□□□ -0.46
CRNKL1-204ENST00000490910 HPS3Q969F9 1004 aa12.17□□□□□ -0.46
CRNKL1-204ENST00000490910 ERP44Q9BS26 406 aa12.17□□□□□ -0.46
CRNKL1-204ENST00000490910 GCNT4Q9P109 453 aa12.17□□□□□ -0.46
CRNKL1-204ENST00000490910 A2ML1A8K2U0 1454 aa12.17□□□□□ -0.46
CRNKL1-204ENST00000490910 MIF4GDA9UHW6 222 aaKnown RBP12.17□□□□□ -0.46
CRNKL1-204ENST00000490910 ZWINTO95229 277 aa12.17□□□□□ -0.46
CRNKL1-204ENST00000490910 KCNA6P17658 529 aa12.17□□□□□ -0.46
CRNKL1-204ENST00000490910 CEBPAP49715 358 aaPredicted RBP12.17□□□□□ -0.46
CRNKL1-204ENST00000490910 BCAMP50895 628 aa12.17□□□□□ -0.46
CRNKL1-204ENST00000490910 FOXO4P98177 505 aa12.17□□□□□ -0.46
CRNKL1-204ENST00000490910 QPCTQ16769 361 aa12.17□□□□□ -0.46
CRNKL1-204ENST00000490910 GSDMBQ8TAX9 411 aa12.17□□□□□ -0.46
CRNKL1-204ENST00000490910 LBHD1Q9BQE6 289 aaPredicted RBP12.17□□□□□ -0.46
CRNKL1-204ENST00000490910 A0A087X0B3 334 aa12.16□□□□□ -0.46
CRNKL1-204ENST00000490910 A0A0G2JND7 137 aa12.16□□□□□ -0.46
CRNKL1-204ENST00000490910 KLRF2D3W0D1 207 aa12.16□□□□□ -0.46
CRNKL1-204ENST00000490910 CASQ2O14958 399 aaPredicted RBP12.16□□□□□ -0.46
CRNKL1-204ENST00000490910 EMILIN3Q9NT22 766 aa12.16□□□□□ -0.46
CRNKL1-204ENST00000490910 PDP2Q9P2J9 529 aa12.16□□□□□ -0.46
CRNKL1-204ENST00000490910 ZNF652Q9Y2D9 606 aa12.16□□□□□ -0.46
CRNKL1-204ENST00000490910 WDR91A4D1P6 747 aa12.16□□□□□ -0.46
CRNKL1-204ENST00000490910 O00370 1275 aa12.16□□□□□ -0.46
CRNKL1-204ENST00000490910 EXOC3O60645 756 aa12.16□□□□□ -0.46
CRNKL1-204ENST00000490910 HSPA1LP34931 641 aa12.16□□□□□ -0.46
CRNKL1-204ENST00000490910 KCNH2Q12809 1159 aa12.16□□□□□ -0.46
CRNKL1-204ENST00000490910 PLS1Q14651 629 aa12.16□□□□□ -0.46
CRNKL1-204ENST00000490910 LACTB2Q53H82 288 aaPredicted RBP12.16□□□□□ -0.46
CRNKL1-204ENST00000490910 METTL13Q8N6R0 699 aa12.16□□□□□ -0.46
CRNKL1-204ENST00000490910 PITPNM2Q9BZ72 1349 aa12.16□□□□□ -0.46
CRNKL1-204ENST00000490910 COL15A1P39059 1388 aa12.16□□□□□ -0.46
CRNKL1-204ENST00000490910 ACADSP16219 412 aa12.16□□□□□ -0.46
CRNKL1-204ENST00000490910 DRD4P21917 467 aa12.16□□□□□ -0.46
CRNKL1-204ENST00000490910 MARK3P27448 753 aa12.16□□□□□ -0.46
CRNKL1-204ENST00000490910 RIPK1Q13546 671 aa12.16□□□□□ -0.46
CRNKL1-204ENST00000490910 TRIP13Q15645 432 aaPredicted RBP12.16□□□□□ -0.46
CRNKL1-204ENST00000490910 LONRF1Q17RB8 773 aa12.16□□□□□ -0.46
CRNKL1-204ENST00000490910 SH3RF1Q7Z6J0 888 aa12.16□□□□□ -0.46
CRNKL1-204ENST00000490910 ERICH1Q86X53 443 aa12.16□□□□□ -0.46
CRNKL1-204ENST00000490910 CFAP57Q96MR6 1250 aa12.16□□□□□ -0.46
CRNKL1-204ENST00000490910 ABCF3Q9NUQ8 709 aa12.16□□□□□ -0.46
CRNKL1-204ENST00000490910 SETD1BQ9UPS6 1966 aaKnown RBP12.16□□□□□ -0.46
CRNKL1-204ENST00000490910 MAGEA13PA6NCF6 341 aa12.15□□□□□ -0.46
CRNKL1-204ENST00000490910 MGRN1O60291 552 aa12.15□□□□□ -0.46
CRNKL1-204ENST00000490910 PLCG2P16885 1265 aa12.15□□□□□ -0.46
CRNKL1-204ENST00000490910 KCNJ2P63252 427 aa12.15□□□□□ -0.46
CRNKL1-204ENST00000490910 ACBD5Q5T8D3 534 aaPredicted RBP12.15□□□□□ -0.46
CRNKL1-204ENST00000490910 PDXDC2PQ6P474 469 aa12.15□□□□□ -0.46
CRNKL1-204ENST00000490910 CCDC137Q6PK04 289 aaKnown RBP12.15□□□□□ -0.46
CRNKL1-204ENST00000490910 USP37Q86T82 979 aa12.15□□□□□ -0.46
CRNKL1-204ENST00000490910 TBCKQ8TEA7 893 aa12.15□□□□□ -0.46
CRNKL1-204ENST00000490910 GJA10Q969M2 543 aa12.15□□□□□ -0.46
CRNKL1-204ENST00000490910 C2CD2Q9Y426 696 aa12.15□□□□□ -0.46
CRNKL1-204ENST00000490910 CTDP1Q9Y5B0 961 aaPredicted RBP12.15□□□□□ -0.46
CRNKL1-204ENST00000490910 GSG1L2A8MUP6 293 aa12.15□□□□□ -0.46
CRNKL1-204ENST00000490910 HNRNPCL1O60812 293 aaKnown RBP12.15□□□□□ -0.46
CRNKL1-204ENST00000490910 GOLGA8HP0CJ92 632 aa12.15□□□□□ -0.46
CRNKL1-204ENST00000490910 PHBP35232 272 aa12.15□□□□□ -0.46
CRNKL1-204ENST00000490910 CACNB1Q02641 598 aaPredicted RBP12.15□□□□□ -0.46
CRNKL1-204ENST00000490910 ERMARDQ5T6L9 678 aa12.15□□□□□ -0.46
CRNKL1-204ENST00000490910 MEI1Q5TIA1 1274 aa12.15□□□□□ -0.46
CRNKL1-204ENST00000490910 BARGINQ6ZT62 677 aa12.15□□□□□ -0.46
CRNKL1-204ENST00000490910 RHOT2Q8IXI1 618 aa12.15□□□□□ -0.46
CRNKL1-204ENST00000490910 EIF1ADQ8N9N8 165 aaKnown RBP12.15□□□□□ -0.46
CRNKL1-204ENST00000490910 SMC1BQ8NDV3 1235 aa12.15□□□□□ -0.46
CRNKL1-204ENST00000490910 TTC1Q99614 292 aa12.15□□□□□ -0.46
CRNKL1-204ENST00000490910 TRIM55Q9BYV6 548 aa12.15□□□□□ -0.46
CRNKL1-204ENST00000490910 DCTN4Q9UJW0 460 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms