RNA–Protein interactions for RNA: ENST00000490716.5

SUPT20H-220, Transcript of SPT20 homolog, SAGA complex component, humanhuman

TSL 5

Gene SUPT20H, Length 3,811 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT20H-220ENST00000490716 EPHA7Q15375 998 aa10.37□□□□□ -0.75
SUPT20H-220ENST00000490716 PPP1R12CQ9BZL4 782 aa10.37□□□□□ -0.75
SUPT20H-220ENST00000490716 VWA8A3KMH1 1905 aa10.37□□□□□ -0.75
SUPT20H-220ENST00000490716 EPOPA6NHQ4 379 aa10.37□□□□□ -0.75
SUPT20H-220ENST00000490716 MGEA5O60502 916 aa10.37□□□□□ -0.75
SUPT20H-220ENST00000490716 FGD1P98174 961 aa10.37□□□□□ -0.75
SUPT20H-220ENST00000490716 RESTQ13127 1097 aa10.37□□□□□ -0.75
SUPT20H-220ENST00000490716 LRCH2Q5VUJ6 765 aa10.37□□□□□ -0.75
SUPT20H-220ENST00000490716 POLR3CQ9BUI4 534 aaPredicted RBP10.37□□□□□ -0.75
SUPT20H-220ENST00000490716 NFKBIZQ9BYH8 718 aa10.37□□□□□ -0.75
SUPT20H-220ENST00000490716 SEMA6BQ9H3T3 888 aa10.37□□□□□ -0.75
SUPT20H-220ENST00000490716 TUBE1Q9UJT0 475 aa10.37□□□□□ -0.75
SUPT20H-220ENST00000490716 PCDHA11Q9Y5I1 949 aa10.37□□□□□ -0.75
SUPT20H-220ENST00000490716 C5orf67F2Z3F1 127 aa10.37□□□□□ -0.75
SUPT20H-220ENST00000490716 MRPS6P82932 125 aaKnown RBP10.37□□□□□ -0.75
SUPT20H-220ENST00000490716 ATP2C1P98194 919 aaPredicted RBP10.37□□□□□ -0.75
SUPT20H-220ENST00000490716 PPFIA1Q13136 1202 aa10.37□□□□□ -0.75
SUPT20H-220ENST00000490716 NOL8Q76FK4 1167 aaKnown RBP10.37□□□□□ -0.75
SUPT20H-220ENST00000490716 TOP1MTQ969P6 601 aa10.37□□□□□ -0.75
SUPT20H-220ENST00000490716 TEKT3Q9BXF9 490 aa10.37□□□□□ -0.75
SUPT20H-220ENST00000490716 TRIOBPQ9H2D6 2365 aa10.37□□□□□ -0.75
SUPT20H-220ENST00000490716 ABHD14A-ACY1A0A1B0GW23 586 aa10.36□□□□□ -0.75
SUPT20H-220ENST00000490716 DEFB103AP81534 67 aa10.36□□□□□ -0.75
SUPT20H-220ENST00000490716 PRKCEQ02156 737 aa10.36□□□□□ -0.75
SUPT20H-220ENST00000490716 AMHR2Q16671 573 aa10.36□□□□□ -0.75
SUPT20H-220ENST00000490716 CPLX2Q6PUV4 134 aaKnown RBP10.36□□□□□ -0.75
SUPT20H-220ENST00000490716 TSPYL2Q9H2G4 693 aaPredicted RBP10.36□□□□□ -0.75
SUPT20H-220ENST00000490716 POU5F1BQ06416 359 aa10.36□□□□□ -0.75
SUPT20H-220ENST00000490716 PDIA5Q14554 519 aa10.36□□□□□ -0.75
SUPT20H-220ENST00000490716 TSHZ1Q6ZSZ6 1077 aa10.36□□□□□ -0.75
SUPT20H-220ENST00000490716 SLFN12Q8IYM2 578 aa10.36□□□□□ -0.75
SUPT20H-220ENST00000490716 RPUSD2Q8IZ73 545 aaKnown RBP10.36□□□□□ -0.75
SUPT20H-220ENST00000490716 CCDC155Q8N6L0 562 aa10.36□□□□□ -0.75
SUPT20H-220ENST00000490716 APBB2Q92870 758 aa10.36□□□□□ -0.75
SUPT20H-220ENST00000490716 SLC9A7Q96T83 725 aa10.36□□□□□ -0.75
SUPT20H-220ENST00000490716 GABBR1Q9UBS5 961 aa10.36□□□□□ -0.75
SUPT20H-220ENST00000490716 PCDHB6Q9Y5E3 794 aa10.36□□□□□ -0.75
SUPT20H-220ENST00000490716 MTCL1Q9Y4B5 1905 aaKnown RBP10.36□□□□□ -0.75
SUPT20H-220ENST00000490716 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.36□□□□□ -0.75
SUPT20H-220ENST00000490716 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.36□□□□□ -0.75
SUPT20H-220ENST00000490716 TMEM150BA6NC51 233 aa10.36□□□□□ -0.75
SUPT20H-220ENST00000490716 CCNT1O60563 726 aaKnown RBP10.36□□□□□ -0.75
SUPT20H-220ENST00000490716 FGBP02675 491 aa10.36□□□□□ -0.75
SUPT20H-220ENST00000490716 XRCC6P12956 609 aaKnown RBP eCLIP10.36□□□□□ -0.75
SUPT20H-220ENST00000490716 GJB2P29033 226 aa10.36□□□□□ -0.75
SUPT20H-220ENST00000490716 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.36□□□□□ -0.75
SUPT20H-220ENST00000490716 CLP1Q92989 425 aaKnown RBP10.36□□□□□ -0.75
SUPT20H-220ENST00000490716 PRDM5Q9NQX1 630 aaPredicted RBP10.36□□□□□ -0.75
SUPT20H-220ENST00000490716 DBR1Q9UK59 544 aaKnown RBP10.36□□□□□ -0.75
SUPT20H-220ENST00000490716 NOP56O00567 594 aaKnown RBP10.35□□□□□ -0.75
SUPT20H-220ENST00000490716 ZBTB39O15060 712 aa10.35□□□□□ -0.75
SUPT20H-220ENST00000490716 ARL2P36404 184 aa10.35□□□□□ -0.75
SUPT20H-220ENST00000490716 AKAP17AQ02040 695 aaKnown RBP10.35□□□□□ -0.75
SUPT20H-220ENST00000490716 ZNF598Q86UK7 904 aaKnown RBP10.35□□□□□ -0.75
SUPT20H-220ENST00000490716 ZNF710Q8N1W2 664 aa10.35□□□□□ -0.75
SUPT20H-220ENST00000490716 GRXCR1A8MXD5 290 aa10.35□□□□□ -0.75
SUPT20H-220ENST00000490716 RSPH10B2B2RC85 870 aa10.35□□□□□ -0.75
SUPT20H-220ENST00000490716 MED24O75448 989 aa10.35□□□□□ -0.75
SUPT20H-220ENST00000490716 PAPLNO95428 1278 aa10.35□□□□□ -0.75
SUPT20H-220ENST00000490716 RSPH10BP0C881 870 aa10.35□□□□□ -0.75
SUPT20H-220ENST00000490716 GNAT1P11488 350 aa10.35□□□□□ -0.75
SUPT20H-220ENST00000490716 KLRC1P26715 233 aa10.35□□□□□ -0.75
SUPT20H-220ENST00000490716 SPRED2Q7Z698 418 aa10.35□□□□□ -0.75
SUPT20H-220ENST00000490716 RGS18Q9NS28 235 aa10.35□□□□□ -0.75
SUPT20H-220ENST00000490716 ATF7P17544 494 aaPredicted RBP10.35□□□□□ -0.75
SUPT20H-220ENST00000490716 GPC3P51654 580 aa10.35□□□□□ -0.75
SUPT20H-220ENST00000490716 PSMC5P62195 406 aa10.35□□□□□ -0.75
SUPT20H-220ENST00000490716 LETM2Q2VYF4 491 aa10.35□□□□□ -0.75
SUPT20H-220ENST00000490716 UTP14CQ5TAP6 766 aaKnown RBP10.35□□□□□ -0.75
SUPT20H-220ENST00000490716 CDCA2Q69YH5 1023 aaPredicted RBP10.35□□□□□ -0.75
SUPT20H-220ENST00000490716 FAM228AQ86W67 206 aa10.35□□□□□ -0.75
SUPT20H-220ENST00000490716 CATSPER3Q86XQ3 398 aa10.35□□□□□ -0.75
SUPT20H-220ENST00000490716 USP38Q8NB14 1042 aa10.35□□□□□ -0.75
SUPT20H-220ENST00000490716 DNAJB3Q8WWF6 145 aa10.35□□□□□ -0.75
SUPT20H-220ENST00000490716 CELF4Q9BZC1 486 aaKnown RBP10.35□□□□□ -0.75
SUPT20H-220ENST00000490716 CCDC113Q9H0I3 377 aa10.35□□□□□ -0.75
SUPT20H-220ENST00000490716 ST18O60284 1047 aa10.34□□□□□ -0.75
SUPT20H-220ENST00000490716 GJB5O95377 273 aa10.34□□□□□ -0.75
SUPT20H-220ENST00000490716 P4HBP07237 508 aaKnown RBP10.34□□□□□ -0.75
SUPT20H-220ENST00000490716 NBR1Q14596 966 aa10.34□□□□□ -0.75
SUPT20H-220ENST00000490716 XKR3Q5GH77 459 aa10.34□□□□□ -0.75
SUPT20H-220ENST00000490716 FAM160B1Q5W0V3 765 aa10.34□□□□□ -0.75
SUPT20H-220ENST00000490716 HERC6Q8IVU3 1022 aa10.34□□□□□ -0.75
SUPT20H-220ENST00000490716 NEK9Q8TD19 979 aa10.34□□□□□ -0.75
SUPT20H-220ENST00000490716 C8orf76Q96K31 380 aa10.34□□□□□ -0.75
SUPT20H-220ENST00000490716 EIF2AK1Q9BQI3 630 aaKnown RBP10.34□□□□□ -0.75
SUPT20H-220ENST00000490716 TUFT1Q9NNX1 390 aa10.34□□□□□ -0.75
SUPT20H-220ENST00000490716 MTMR6Q9Y217 621 aa10.34□□□□□ -0.75
SUPT20H-220ENST00000490716 CDY2AQ9Y6F7 541 aa10.34□□□□□ -0.75
SUPT20H-220ENST00000490716 LCHNA4D1U4 455 aa10.34□□□□□ -0.75
SUPT20H-220ENST00000490716 ENPP3O14638 875 aa10.34□□□□□ -0.75
SUPT20H-220ENST00000490716 GAS7O60861 476 aa10.34□□□□□ -0.75
SUPT20H-220ENST00000490716 RPA1P27694 616 aa10.34□□□□□ -0.75
SUPT20H-220ENST00000490716 TAP1Q03518 808 aa10.34□□□□□ -0.75
SUPT20H-220ENST00000490716 TMEM119Q4V9L6 283 aa10.34□□□□□ -0.75
SUPT20H-220ENST00000490716 FAM167AQ96KS9 214 aa10.34□□□□□ -0.75
SUPT20H-220ENST00000490716 CYP26B1Q9NR63 512 aa10.34□□□□□ -0.75
SUPT20H-220ENST00000490716 PKD2L1Q9P0L9 805 aa10.34□□□□□ -0.75
SUPT20H-220ENST00000490716 STXBP5LQ9Y2K9 1186 aa10.34□□□□□ -0.75
SUPT20H-220ENST00000490716 ZDHHC9Q9Y397 364 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms