RNA–Protein interactions for RNA: ENST00000490471.1

CDCP1-203, Transcript of CUB domain containing protein 1, humanhuman

TSL 4

Gene CDCP1, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1-203ENST00000490471 NFX1Q12986 1120 aaKnown RBP12.85□□□□□ -0.35
CDCP1-203ENST00000490471 CSPP1Q1MSJ5 1256 aa12.85□□□□□ -0.35
CDCP1-203ENST00000490471 TCTN1Q2MV58 587 aa12.85□□□□□ -0.35
CDCP1-203ENST00000490471 MARCH8Q5T0T0 291 aa12.85□□□□□ -0.35
CDCP1-203ENST00000490471 KRT40Q6A162 431 aa12.85□□□□□ -0.35
CDCP1-203ENST00000490471 GALNT17Q6IS24 598 aa12.85□□□□□ -0.35
CDCP1-203ENST00000490471 SWSAP1Q6NVH7 229 aa12.85□□□□□ -0.35
CDCP1-203ENST00000490471 CMTR2Q8IYT2 770 aaKnown RBP12.85□□□□□ -0.35
CDCP1-203ENST00000490471 P2RX5Q93086 422 aa12.85□□□□□ -0.35
CDCP1-203ENST00000490471 PGBD1Q96JS3 809 aa12.85□□□□□ -0.35
CDCP1-203ENST00000490471 MAP7D2Q96T17 732 aa12.85□□□□□ -0.35
CDCP1-203ENST00000490471 SNX14Q9Y5W7 946 aa12.85□□□□□ -0.35
CDCP1-203ENST00000490471 PTPRSQ13332 1948 aa12.85□□□□□ -0.35
CDCP1-203ENST00000490471 COL4A6Q14031 1691 aa12.85□□□□□ -0.35
CDCP1-203ENST00000490471 RALGAPA2Q2PPJ7 1873 aa12.85□□□□□ -0.35
CDCP1-203ENST00000490471 IGKV6D-21A0A0A0MT36 114 aa12.84□□□□□ -0.35
CDCP1-203ENST00000490471 CARNS1A5YM72 827 aa12.84□□□□□ -0.35
CDCP1-203ENST00000490471 WDR64B1ANS9 1081 aa12.84□□□□□ -0.35
CDCP1-203ENST00000490471 HOXA2O43364 376 aa12.84□□□□□ -0.35
CDCP1-203ENST00000490471 DKC1O60832 514 aaKnown RBP eCLIP12.84□□□□□ -0.35
CDCP1-203ENST00000490471 DGKIO75912 1065 aa12.84□□□□□ -0.35
CDCP1-203ENST00000490471 CDKL5O76039 1030 aa12.84□□□□□ -0.35
CDCP1-203ENST00000490471 ARHGEF15O94989 841 aa12.84□□□□□ -0.35
CDCP1-203ENST00000490471 ZSCAN20P17040 1043 aaPredicted RBP12.84□□□□□ -0.35
CDCP1-203ENST00000490471 IFNAR1P17181 557 aa12.84□□□□□ -0.35
CDCP1-203ENST00000490471 KCNA5P22460 613 aa12.84□□□□□ -0.35
CDCP1-203ENST00000490471 BMS1Q14692 1282 aaKnown RBP12.84□□□□□ -0.35
CDCP1-203ENST00000490471 SPOUT1Q5T280 376 aaKnown RBP12.84□□□□□ -0.35
CDCP1-203ENST00000490471 ABHD15Q6UXT9 468 aa12.84□□□□□ -0.35
CDCP1-203ENST00000490471 RUFY3Q7L099 469 aa12.84□□□□□ -0.35
CDCP1-203ENST00000490471 CYP2W1Q8TAV3 490 aa12.84□□□□□ -0.35
CDCP1-203ENST00000490471 PABPC5Q96DU9 382 aaKnown RBP12.84□□□□□ -0.35
CDCP1-203ENST00000490471 NAP1L4Q99733 375 aaKnown RBP12.84□□□□□ -0.35
CDCP1-203ENST00000490471 SLC26A6Q9BXS9 759 aa12.84□□□□□ -0.35
CDCP1-203ENST00000490471 UPF3BQ9BZI7 483 aaKnown RBP12.84□□□□□ -0.35
CDCP1-203ENST00000490471 TMEM260Q9NX78 707 aa12.84□□□□□ -0.35
CDCP1-203ENST00000490471 PADI3Q9ULW8 664 aa12.84□□□□□ -0.35
CDCP1-203ENST00000490471 GINS2Q9Y248 185 aa12.84□□□□□ -0.35
CDCP1-203ENST00000490471 PCDHB12Q9Y5F1 795 aa12.84□□□□□ -0.35
CDCP1-203ENST00000490471 IGSF9BQ9UPX0 1349 aa12.84□□□□□ -0.35
CDCP1-203ENST00000490471 DEXIO95424 95 aa12.83□□□□□ -0.36
CDCP1-203ENST00000490471 ALADP13716 330 aa12.83□□□□□ -0.36
CDCP1-203ENST00000490471 CD52P31358 61 aa12.83□□□□□ -0.36
CDCP1-203ENST00000490471 SSTR3P32745 418 aaPredicted RBP12.83□□□□□ -0.36
CDCP1-203ENST00000490471 DNM2P50570 870 aa12.83□□□□□ -0.36
CDCP1-203ENST00000490471 JAK3P52333 1124 aa12.83□□□□□ -0.36
CDCP1-203ENST00000490471 CRYBB1P53674 252 aaPredicted RBP12.83□□□□□ -0.36
CDCP1-203ENST00000490471 ITGB3BPQ13352 177 aaPredicted RBP12.83□□□□□ -0.36
CDCP1-203ENST00000490471 PRR16Q569H4 304 aa12.83□□□□□ -0.36
CDCP1-203ENST00000490471 EXOC8Q8IYI6 725 aa12.83□□□□□ -0.36
CDCP1-203ENST00000490471 METTL13Q8N6R0 699 aa12.83□□□□□ -0.36
CDCP1-203ENST00000490471 RDM1Q8NG50 284 aa12.83□□□□□ -0.36
CDCP1-203ENST00000490471 CLP1Q92989 425 aaKnown RBP12.83□□□□□ -0.36
CDCP1-203ENST00000490471 ZNF274Q96GC6 653 aaPredicted RBP12.83□□□□□ -0.36
CDCP1-203ENST00000490471 PCYT2Q99447 389 aa12.83□□□□□ -0.36
CDCP1-203ENST00000490471 POP1Q99575 1024 aaKnown RBP12.83□□□□□ -0.36
CDCP1-203ENST00000490471 RIT2Q99578 217 aa12.83□□□□□ -0.36
CDCP1-203ENST00000490471 TEKT3Q9BXF9 490 aa12.83□□□□□ -0.36
CDCP1-203ENST00000490471 FAM217BQ9NTX9 383 aaPredicted RBP12.83□□□□□ -0.36
CDCP1-203ENST00000490471 PRKAG3Q9UGI9 489 aa12.83□□□□□ -0.36
CDCP1-203ENST00000490471 COL4A4P53420 1690 aaPredicted RBP12.83□□□□□ -0.36
CDCP1-203ENST00000490471 NID2Q14112 1375 aa12.82□□□□□ -0.36
CDCP1-203ENST00000490471 FAM86B1E9PN63 330 aa12.82□□□□□ -0.36
CDCP1-203ENST00000490471 GAS7O60861 476 aa12.82□□□□□ -0.36
CDCP1-203ENST00000490471 FAM86B2P0C5J1 330 aa12.82□□□□□ -0.36
CDCP1-203ENST00000490471 SRGAP2BP0DMP2 458 aa12.82□□□□□ -0.36
CDCP1-203ENST00000490471 COL9A1P20849 921 aa12.82□□□□□ -0.36
CDCP1-203ENST00000490471 CIITAP33076 1130 aa12.82□□□□□ -0.36
CDCP1-203ENST00000490471 SARSP49591 514 aaKnown RBP12.82□□□□□ -0.36
CDCP1-203ENST00000490471 UBE3AQ05086 875 aa12.82□□□□□ -0.36
CDCP1-203ENST00000490471 TMEM62Q0P6H9 643 aa12.82□□□□□ -0.36
CDCP1-203ENST00000490471 PTCRAQ6ISU1 281 aaPredicted RBP12.82□□□□□ -0.36
CDCP1-203ENST00000490471 PDE12Q6L8Q7 609 aaKnown RBP12.82□□□□□ -0.36
CDCP1-203ENST00000490471 TYW1BQ6NUM6 668 aa12.82□□□□□ -0.36
CDCP1-203ENST00000490471 SLC24A5Q71RS6 500 aa12.82□□□□□ -0.36
CDCP1-203ENST00000490471 RSPH1Q8WYR4 309 aa12.82□□□□□ -0.36
CDCP1-203ENST00000490471 ZNF689Q96CS4 500 aaPredicted RBP12.82□□□□□ -0.36
CDCP1-203ENST00000490471 SCLT1Q96NL6 688 aa12.82□□□□□ -0.36
CDCP1-203ENST00000490471 JPH2Q9BR39 696 aaPredicted RBP12.82□□□□□ -0.36
CDCP1-203ENST00000490471 AGXT2Q9BYV1 514 aa12.82□□□□□ -0.36
CDCP1-203ENST00000490471 TM6SF1Q9BZW5 370 aa12.82□□□□□ -0.36
CDCP1-203ENST00000490471 PUF60Q9UHX1 559 aaKnown RBP12.82□□□□□ -0.36
CDCP1-203ENST00000490471 HCN4Q9Y3Q4 1203 aa12.82□□□□□ -0.36
CDCP1-203ENST00000490471 MAFBQ9Y5Q3 323 aaPredicted RBP12.82□□□□□ -0.36
CDCP1-203ENST00000490471 TCF20Q9UGU0 1960 aaKnown RBP12.81□□□□□ -0.36
CDCP1-203ENST00000490471 PRRC2BQ5JSZ5 2229 aaKnown RBP12.81□□□□□ -0.36
CDCP1-203ENST00000490471 MARCH6O60337 910 aa12.81□□□□□ -0.36
CDCP1-203ENST00000490471 PDIA3P30101 505 aaKnown RBP12.81□□□□□ -0.36
CDCP1-203ENST00000490471 EVCP57679 992 aa12.81□□□□□ -0.36
CDCP1-203ENST00000490471 ANKRD1Q15327 319 aa12.81□□□□□ -0.36
CDCP1-203ENST00000490471 TCEAL5Q5H9L2 206 aa12.81□□□□□ -0.36
CDCP1-203ENST00000490471 TMEM31Q5JXX7 168 aa12.81□□□□□ -0.36
CDCP1-203ENST00000490471 ABI1Q8IZP0 508 aa12.81□□□□□ -0.36
CDCP1-203ENST00000490471 WASF1Q92558 559 aa12.81□□□□□ -0.36
CDCP1-203ENST00000490471 INO80BQ9C086 356 aaPredicted RBP12.81□□□□□ -0.36
CDCP1-203ENST00000490471 ELAC1Q9H777 363 aaKnown RBP12.81□□□□□ -0.36
CDCP1-203ENST00000490471 ATP6V0A4Q9HBG4 840 aa12.81□□□□□ -0.36
CDCP1-203ENST00000490471 CLDND1Q9NY35 253 aa12.81□□□□□ -0.36
CDCP1-203ENST00000490471 GABBR1Q9UBS5 961 aa12.81□□□□□ -0.36
CDCP1-203ENST00000490471 PCDHA4Q9UN74 947 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms