RNA–Protein interactions for RNA: ENST00000488937.1

PRPF4-203, Transcript of pre-mRNA processing factor 4, humanhuman

TSL 3

Gene PRPF4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-203ENST00000488937 CDCA2Q69YH5 1023 aaPredicted RBP4.17□□□□□ -1.74
PRPF4-203ENST00000488937 MZT2AQ6P582 158 aa4.17□□□□□ -1.74
PRPF4-203ENST00000488937 NSMFQ6X4W1 530 aa4.17□□□□□ -1.74
PRPF4-203ENST00000488937 KRT77Q7Z794 578 aa4.17□□□□□ -1.74
PRPF4-203ENST00000488937 PPFIBP1Q86W92 1011 aa4.17□□□□□ -1.74
PRPF4-203ENST00000488937 ZNF227Q86WZ6 799 aa4.17□□□□□ -1.74
PRPF4-203ENST00000488937 ZNF354CQ86Y25 554 aa4.17□□□□□ -1.74
PRPF4-203ENST00000488937 TMEM192Q8IY95 271 aa4.17□□□□□ -1.74
PRPF4-203ENST00000488937 ZNF655Q8N720 491 aaPredicted RBP4.17□□□□□ -1.74
PRPF4-203ENST00000488937 DAGLBQ8NCG7 672 aa4.17□□□□□ -1.74
PRPF4-203ENST00000488937 NGDNQ8NEJ9 315 aaKnown RBP4.17□□□□□ -1.74
PRPF4-203ENST00000488937 VPS37AQ8NEZ2 397 aa4.17□□□□□ -1.74
PRPF4-203ENST00000488937 ERP27Q96DN0 273 aa4.17□□□□□ -1.74
PRPF4-203ENST00000488937 HHIPL1Q96JK4 782 aa4.17□□□□□ -1.74
PRPF4-203ENST00000488937 SCLT1Q96NL6 688 aa4.17□□□□□ -1.74
PRPF4-203ENST00000488937 NAP1L5Q96NT1 182 aaPredicted RBP4.17□□□□□ -1.74
PRPF4-203ENST00000488937 NAA15Q9BXJ9 866 aaKnown RBP4.17□□□□□ -1.74
PRPF4-203ENST00000488937 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.17□□□□□ -1.74
PRPF4-203ENST00000488937 NDOR1Q9UHB4 597 aa4.17□□□□□ -1.74
PRPF4-203ENST00000488937 POLG2Q9UHN1 485 aa4.17□□□□□ -1.74
PRPF4-203ENST00000488937 ASAP1Q9ULH1 1129 aa4.17□□□□□ -1.74
PRPF4-203ENST00000488937 DMTF1Q9Y222 760 aa4.17□□□□□ -1.74
PRPF4-203ENST00000488937 FAM50BQ9Y247 325 aa4.17□□□□□ -1.74
PRPF4-203ENST00000488937 SHISA3A0PJX4 238 aa4.16□□□□□ -1.74
PRPF4-203ENST00000488937 PRSS47A8MTI9 375 aa4.16□□□□□ -1.74
PRPF4-203ENST00000488937 PRODHO43272 600 aa4.16□□□□□ -1.74
PRPF4-203ENST00000488937 CLEC3AO75596 197 aa4.16□□□□□ -1.74
PRPF4-203ENST00000488937 CT47B1P0C2W7 299 aaPredicted RBP4.16□□□□□ -1.74
PRPF4-203ENST00000488937 MSL3P1P0C860 447 aa4.16□□□□□ -1.74
PRPF4-203ENST00000488937 RBP3P10745 1247 aa4.16□□□□□ -1.74
PRPF4-203ENST00000488937 RHCEP18577 417 aa4.16□□□□□ -1.74
PRPF4-203ENST00000488937 VCAM1P19320 739 aa4.16□□□□□ -1.74
PRPF4-203ENST00000488937 SDHBP21912 280 aa4.16□□□□□ -1.74
PRPF4-203ENST00000488937 CNR2P34972 360 aa4.16□□□□□ -1.74
PRPF4-203ENST00000488937 FLT3P36888 993 aa4.16□□□□□ -1.74
PRPF4-203ENST00000488937 ADCYAP1R1P41586 468 aa4.16□□□□□ -1.74
PRPF4-203ENST00000488937 GPSM2P81274 684 aa4.16□□□□□ -1.74
PRPF4-203ENST00000488937 RHDQ02161 417 aa4.16□□□□□ -1.74
PRPF4-203ENST00000488937 DSG1Q02413 1049 aa4.16□□□□□ -1.74
PRPF4-203ENST00000488937 FAPQ12884 760 aa4.16□□□□□ -1.74
PRPF4-203ENST00000488937 NMIQ13287 307 aaPredicted RBP4.16□□□□□ -1.74
PRPF4-203ENST00000488937 KLF1Q13351 362 aaPredicted RBP4.16□□□□□ -1.74
PRPF4-203ENST00000488937 PCBP2Q15366 365 aaKnown RBP eCLIP4.16□□□□□ -1.74
PRPF4-203ENST00000488937 PUM3Q15397 648 aaKnown RBP4.16□□□□□ -1.74
PRPF4-203ENST00000488937 ELF2Q15723 593 aa4.16□□□□□ -1.74
PRPF4-203ENST00000488937 NBPF9Q3BBW0 867 aa4.16□□□□□ -1.74
PRPF4-203ENST00000488937 BBS9Q3SYG4 887 aa4.16□□□□□ -1.74
PRPF4-203ENST00000488937 CFAP100Q494V2 611 aa4.16□□□□□ -1.74
PRPF4-203ENST00000488937 ARHGAP29Q52LW3 1261 aa4.16□□□□□ -1.74
PRPF4-203ENST00000488937 ZCCHC8Q6NZY4 707 aaKnown RBP4.16□□□□□ -1.74
PRPF4-203ENST00000488937 C1orf228Q6PIY5 440 aa4.16□□□□□ -1.74
PRPF4-203ENST00000488937 ZC3H14Q6PJT7 736 aaKnown RBP4.16□□□□□ -1.74
PRPF4-203ENST00000488937 BHLHA9Q7RTU4 235 aa4.16□□□□□ -1.74
PRPF4-203ENST00000488937 CCDC89Q8N998 374 aa4.16□□□□□ -1.74
PRPF4-203ENST00000488937 C1orf162Q8NEQ5 155 aaPredicted RBP4.16□□□□□ -1.74
PRPF4-203ENST00000488937 LOXL4Q96JB6 756 aa4.16□□□□□ -1.74
PRPF4-203ENST00000488937 FCRL2Q96LA5 508 aaPredicted RBP4.16□□□□□ -1.74
PRPF4-203ENST00000488937 SLC6A18Q96N87 628 aa4.16□□□□□ -1.74
PRPF4-203ENST00000488937 GPR101Q96P66 508 aaPredicted RBP4.16□□□□□ -1.74
PRPF4-203ENST00000488937 SLC12A5Q9H2X9 1139 aa4.16□□□□□ -1.74
PRPF4-203ENST00000488937 RSAD1Q9HA92 442 aa4.16□□□□□ -1.74
PRPF4-203ENST00000488937 C1orf112Q9NSG2 853 aa4.16□□□□□ -1.74
PRPF4-203ENST00000488937 FBXO2Q9UK22 296 aaPredicted RBP4.16□□□□□ -1.74
PRPF4-203ENST00000488937 TCFL5Q9UL49 500 aa4.16□□□□□ -1.74
PRPF4-203ENST00000488937 HS3ST3A1Q9Y663 406 aa4.16□□□□□ -1.74
PRPF4-203ENST00000488937 SH3D21A4FU49 640 aa4.15□□□□□ -1.75
PRPF4-203ENST00000488937 A6NNZ2 444 aa4.15□□□□□ -1.75
PRPF4-203ENST00000488937 NUDT19A8MXV4 375 aa4.15□□□□□ -1.75
PRPF4-203ENST00000488937 B4E1Z4 1266 aa4.15□□□□□ -1.75
PRPF4-203ENST00000488937 RHOBTB3O94955 611 aa4.15□□□□□ -1.75
PRPF4-203ENST00000488937 ZRANB2O95218 330 aaKnown RBP eCLIP4.15□□□□□ -1.75
PRPF4-203ENST00000488937 EFEMP2O95967 443 aa4.15□□□□□ -1.75
PRPF4-203ENST00000488937 HRGP04196 525 aa4.15□□□□□ -1.75
PRPF4-203ENST00000488937 MYBL2P10244 700 aa4.15□□□□□ -1.75
PRPF4-203ENST00000488937 VDRP11473 427 aa4.15□□□□□ -1.75
PRPF4-203ENST00000488937 KCNA6P17658 529 aa4.15□□□□□ -1.75
PRPF4-203ENST00000488937 IGFBP6P24592 240 aaPredicted RBP4.15□□□□□ -1.75
PRPF4-203ENST00000488937 RXRGP48443 463 aa4.15□□□□□ -1.75
PRPF4-203ENST00000488937 CCT5P48643 541 aa4.15□□□□□ -1.75
PRPF4-203ENST00000488937 MAPKAPK2P49137 400 aa4.15□□□□□ -1.75
PRPF4-203ENST00000488937 PMS1P54277 932 aaKnown RBP4.15□□□□□ -1.75
PRPF4-203ENST00000488937 EIF5P55010 431 aaKnown RBP4.15□□□□□ -1.75
PRPF4-203ENST00000488937 CYP4F8P98187 520 aa4.15□□□□□ -1.75
PRPF4-203ENST00000488937 ADCY1Q08828 1119 aa4.15□□□□□ -1.75
PRPF4-203ENST00000488937 ODF1Q14990 250 aa4.15□□□□□ -1.75
PRPF4-203ENST00000488937 SLC4A8Q2Y0W8 1093 aa4.15□□□□□ -1.75
PRPF4-203ENST00000488937 TUBB8Q3ZCM7 444 aa4.15□□□□□ -1.75
PRPF4-203ENST00000488937 JAKMIP3Q5VZ66 844 aa4.15□□□□□ -1.75
PRPF4-203ENST00000488937 PPP4R3AQ6IN85 833 aa4.15□□□□□ -1.75
PRPF4-203ENST00000488937 PDXDC1Q6P996 788 aa4.15□□□□□ -1.75
PRPF4-203ENST00000488937 SRLQ86TD4 932 aa4.15□□□□□ -1.75
PRPF4-203ENST00000488937 SAPCD2Q86UD0 394 aa4.15□□□□□ -1.75
PRPF4-203ENST00000488937 FAM186BQ8IYM0 893 aa4.15□□□□□ -1.75
PRPF4-203ENST00000488937 CLASRPQ8N2M8 674 aaKnown RBP4.15□□□□□ -1.75
PRPF4-203ENST00000488937 LINC00116Q8NCU8 138 aa4.15□□□□□ -1.75
PRPF4-203ENST00000488937 SMC1BQ8NDV3 1235 aa4.15□□□□□ -1.75
PRPF4-203ENST00000488937 CHST13Q8NET6 341 aa4.15□□□□□ -1.75
PRPF4-203ENST00000488937 PARD3BQ8TEW8 1205 aa4.15□□□□□ -1.75
PRPF4-203ENST00000488937 PTPRN2Q92932 1015 aa4.15□□□□□ -1.75
PRPF4-203ENST00000488937 FAXDC2Q96IV6 333 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms