RNA–Protein interactions for RNA: ENST00000488353.2

RER1-207, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RER1, Length 2,469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-207ENST00000488353 UIMC1Q96RL1 719 aa15.5■□□□□ 0.07
RER1-207ENST00000488353 BLOC1S4Q9NUP1 217 aa15.5■□□□□ 0.07
RER1-207ENST00000488353 ABCB11O95342 1321 aa15.49■□□□□ 0.07
RER1-207ENST00000488353 CFAP73A6NFT4 308 aa15.49■□□□□ 0.07
RER1-207ENST00000488353 POTEMA6NI47 508 aa15.49■□□□□ 0.07
RER1-207ENST00000488353 TDP2O95551 362 aa15.49■□□□□ 0.07
RER1-207ENST00000488353 ANP32DO95626 131 aa15.49■□□□□ 0.07
RER1-207ENST00000488353 ALDH1B1P30837 517 aa15.49■□□□□ 0.07
RER1-207ENST00000488353 PDE6BP35913 854 aa15.49■□□□□ 0.07
RER1-207ENST00000488353 CALCRLQ16602 461 aa15.49■□□□□ 0.07
RER1-207ENST00000488353 ERMARDQ5T6L9 678 aa15.49■□□□□ 0.07
RER1-207ENST00000488353 HGSNATQ68CP4 663 aa15.49■□□□□ 0.07
RER1-207ENST00000488353 GLIS3Q8NEA6 775 aa15.49■□□□□ 0.07
RER1-207ENST00000488353 LMBR1Q8WVP7 490 aa15.49■□□□□ 0.07
RER1-207ENST00000488353 TAF4BQ92750 862 aa15.49■□□□□ 0.07
RER1-207ENST00000488353 CDK5RAP3Q96JB5 506 aa15.49■□□□□ 0.07
RER1-207ENST00000488353 PNMA5Q96PV4 448 aa15.49■□□□□ 0.07
RER1-207ENST00000488353 NUDT12Q9BQG2 462 aa15.49■□□□□ 0.07
RER1-207ENST00000488353 NUCKS1Q9H1E3 243 aaKnown RBP15.49■□□□□ 0.07
RER1-207ENST00000488353 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.49■□□□□ 0.07
RER1-207ENST00000488353 SLC12A4Q9UP95 1085 aa15.49■□□□□ 0.07
RER1-207ENST00000488353 SLC37A4O43826 429 aa15.49■□□□□ 0.07
RER1-207ENST00000488353 BIRC2Q13490 618 aa15.49■□□□□ 0.07
RER1-207ENST00000488353 COBLL1Q53SF7 1204 aa15.49■□□□□ 0.07
RER1-207ENST00000488353 CENPPQ6IPU0 288 aa15.49■□□□□ 0.07
RER1-207ENST00000488353 BZW1Q7L1Q6 419 aaKnown RBP15.49■□□□□ 0.07
RER1-207ENST00000488353 TCP11Q8WWU5 503 aa15.49■□□□□ 0.07
RER1-207ENST00000488353 GJA10Q969M2 543 aa15.49■□□□□ 0.07
RER1-207ENST00000488353 PSMD1Q99460 953 aa15.49■□□□□ 0.07
RER1-207ENST00000488353 FBXL5Q9UKA1 691 aa15.49■□□□□ 0.07
RER1-207ENST00000488353 TRPC6Q9Y210 931 aa15.49■□□□□ 0.07
RER1-207ENST00000488353 COL11A2P13942 1736 aaPredicted RBP15.48■□□□□ 0.07
RER1-207ENST00000488353 FGFR1OPO95684 399 aaKnown RBP15.48■□□□□ 0.07
RER1-207ENST00000488353 CLTAP09496 248 aa15.48■□□□□ 0.07
RER1-207ENST00000488353 KLRC1P26715 233 aa15.48■□□□□ 0.07
RER1-207ENST00000488353 ITIH4Q14624 930 aa15.48■□□□□ 0.07
RER1-207ENST00000488353 ZNF772Q68DY9 489 aaPredicted RBP15.48■□□□□ 0.07
RER1-207ENST00000488353 MASTLQ96GX5 879 aa15.48■□□□□ 0.07
RER1-207ENST00000488353 XPO6Q96QU8 1125 aaKnown RBP15.48■□□□□ 0.07
RER1-207ENST00000488353 SH3GL3Q99963 347 aa15.48■□□□□ 0.07
RER1-207ENST00000488353 USP40Q9NVE5 1235 aa15.48■□□□□ 0.07
RER1-207ENST00000488353 PCDHAC2Q9Y5I4 1007 aa15.48■□□□□ 0.07
RER1-207ENST00000488353 ADAMTSL1Q8N6G6 1762 aa15.48■□□□□ 0.07
RER1-207ENST00000488353 AKR1B1P15121 316 aa15.48■□□□□ 0.07
RER1-207ENST00000488353 MAP2K1Q02750 393 aaPredicted RBP15.48■□□□□ 0.07
RER1-207ENST00000488353 KRT71Q3SY84 523 aa15.48■□□□□ 0.07
RER1-207ENST00000488353 PNMA8AQ86V59 439 aaPredicted RBP15.48■□□□□ 0.07
RER1-207ENST00000488353 LRRC47Q8N1G4 583 aaKnown RBP15.48■□□□□ 0.07
RER1-207ENST00000488353 RNF217Q8TC41 542 aa15.48■□□□□ 0.07
RER1-207ENST00000488353 SCFD2Q8WU76 684 aa15.48■□□□□ 0.07
RER1-207ENST00000488353 LARP4BQ92615 738 aaKnown RBP15.48■□□□□ 0.07
RER1-207ENST00000488353 SAAL1Q96ER3 474 aa15.48■□□□□ 0.07
RER1-207ENST00000488353 TANGO6Q9C0B7 1094 aa15.48■□□□□ 0.07
RER1-207ENST00000488353 PACSIN2Q9UNF0 486 aaPredicted RBP15.48■□□□□ 0.07
RER1-207ENST00000488353 ASAP2O43150 1006 aa15.47■□□□□ 0.07
RER1-207ENST00000488353 CTNND1O60716 968 aaKnown RBP15.47■□□□□ 0.07
RER1-207ENST00000488353 SERPING1P05155 500 aa15.47■□□□□ 0.07
RER1-207ENST00000488353 NT5C2P49902 561 aa15.47■□□□□ 0.07
RER1-207ENST00000488353 KCNK18Q7Z418 384 aa15.47■□□□□ 0.07
RER1-207ENST00000488353 SYN2Q92777 582 aaPredicted RBP15.47■□□□□ 0.07
RER1-207ENST00000488353 FAM129AQ9BZQ8 928 aa15.47■□□□□ 0.07
RER1-207ENST00000488353 GPCPD1Q9NPB8 672 aa15.47■□□□□ 0.07
RER1-207ENST00000488353 NOP53Q9NZM5 478 aaKnown RBP15.47■□□□□ 0.07
RER1-207ENST00000488353 DCDC2CA8MYV0 355 aa15.46■□□□□ 0.07
RER1-207ENST00000488353 BHMG1C9JSJ3 638 aaPredicted RBP15.46■□□□□ 0.07
RER1-207ENST00000488353 CACNB3P54284 484 aa15.46■□□□□ 0.07
RER1-207ENST00000488353 NFIAQ12857 509 aa15.46■□□□□ 0.07
RER1-207ENST00000488353 ZNF268Q14587 947 aaPredicted RBP15.46■□□□□ 0.07
RER1-207ENST00000488353 RPS6KA1Q15418 735 aa15.46■□□□□ 0.07
RER1-207ENST00000488353 CDCA2Q69YH5 1023 aaPredicted RBP15.46■□□□□ 0.07
RER1-207ENST00000488353 DDX42Q86XP3 938 aaKnown RBP eCLIP15.46■□□□□ 0.07
RER1-207ENST00000488353 PBKQ96KB5 322 aa15.46■□□□□ 0.07
RER1-207ENST00000488353 CALR3Q96L12 384 aaKnown RBP15.46■□□□□ 0.07
RER1-207ENST00000488353 MTMR9Q96QG7 549 aa15.46■□□□□ 0.07
RER1-207ENST00000488353 TMX4Q9H1E5 349 aaPredicted RBP15.46■□□□□ 0.07
RER1-207ENST00000488353 HOMER3Q9NSC5 361 aa15.46■□□□□ 0.07
RER1-207ENST00000488353 KLHL33A6NCF5 533 aa15.46■□□□□ 0.07
RER1-207ENST00000488353 KCNK3O14649 394 aa15.46■□□□□ 0.07
RER1-207ENST00000488353 SART1O43290 800 aaKnown RBP15.46■□□□□ 0.07
RER1-207ENST00000488353 EIF3BP55884 814 aaKnown RBP15.46■□□□□ 0.07
RER1-207ENST00000488353 CDC42EP5Q6NZY7 148 aa15.46■□□□□ 0.07
RER1-207ENST00000488353 UNC13DQ70J99 1090 aa15.46■□□□□ 0.07
RER1-207ENST00000488353 KIAA0825Q8IV33 1275 aa15.46■□□□□ 0.07
RER1-207ENST00000488353 ACTRT1Q8TDG2 376 aa15.46■□□□□ 0.07
RER1-207ENST00000488353 SNX29Q8TEQ0 813 aa15.46■□□□□ 0.07
RER1-207ENST00000488353 ZNF317Q96PQ6 595 aaPredicted RBP15.46■□□□□ 0.07
RER1-207ENST00000488353 KIF9Q9HAQ2 790 aa15.46■□□□□ 0.07
RER1-207ENST00000488353 L3MBTL1Q9Y468 752 aa15.46■□□□□ 0.07
RER1-207ENST00000488353 NRXN2Q9P2S2 1712 aa15.46■□□□□ 0.07
RER1-207ENST00000488353 EDIL3O43854 480 aa15.45■□□□□ 0.06
RER1-207ENST00000488353 CHRNA5P30532 468 aa15.45■□□□□ 0.06
RER1-207ENST00000488353 TNNI2P48788 182 aa15.45■□□□□ 0.06
RER1-207ENST00000488353 GABPAQ06546 454 aa15.45■□□□□ 0.06
RER1-207ENST00000488353 UBE2SQ16763 222 aa15.45■□□□□ 0.06
RER1-207ENST00000488353 KIAA0753Q2KHM9 967 aa15.45■□□□□ 0.06
RER1-207ENST00000488353 SFMBT2Q5VUG0 894 aa15.45■□□□□ 0.06
RER1-207ENST00000488353 CAPRIN2Q6IMN6 1127 aaKnown RBP15.45■□□□□ 0.06
RER1-207ENST00000488353 PIGWQ7Z7B1 504 aa15.45■□□□□ 0.06
RER1-207ENST00000488353 DDX12PQ92771 950 aa15.45■□□□□ 0.06
RER1-207ENST00000488353 TLCD1Q96CP7 247 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms