RNA–Protein interactions for RNA: ENST00000487043.5

PTCD3-216, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 1,054 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-216ENST00000487043 TMEM253P0C7T8 217 aa5.19□□□□□ -1.58
PTCD3-216ENST00000487043 MSL3P1P0C860 447 aa5.19□□□□□ -1.58
PTCD3-216ENST00000487043 CD40P25942 277 aa5.19□□□□□ -1.58
PTCD3-216ENST00000487043 GDNFP39905 211 aa5.19□□□□□ -1.58
PTCD3-216ENST00000487043 GPR3P46089 330 aa5.19□□□□□ -1.58
PTCD3-216ENST00000487043 KIR3DS1Q14943 382 aa5.19□□□□□ -1.58
PTCD3-216ENST00000487043 PDCD1Q15116 288 aa5.19□□□□□ -1.58
PTCD3-216ENST00000487043 SEC23AQ15436 765 aa5.19□□□□□ -1.58
PTCD3-216ENST00000487043 GPR158Q5T848 1215 aa5.19□□□□□ -1.58
PTCD3-216ENST00000487043 STEAP3Q658P3 488 aa5.19□□□□□ -1.58
PTCD3-216ENST00000487043 FRMD7Q6ZUT3 714 aa5.19□□□□□ -1.58
PTCD3-216ENST00000487043 RIOX2Q8IUF8 465 aa5.19□□□□□ -1.58
PTCD3-216ENST00000487043 NUP43Q8NFH3 380 aa5.19□□□□□ -1.58
PTCD3-216ENST00000487043 TGFBRAP1Q8WUH2 860 aa5.19□□□□□ -1.58
PTCD3-216ENST00000487043 LMBR1Q8WVP7 490 aa5.19□□□□□ -1.58
PTCD3-216ENST00000487043 DLG3Q92796 817 aa5.19□□□□□ -1.58
PTCD3-216ENST00000487043 CCDC120Q96HB5 630 aa5.19□□□□□ -1.58
PTCD3-216ENST00000487043 LRGUKQ96M69 825 aa5.19□□□□□ -1.58
PTCD3-216ENST00000487043 MYH16Q9H6N6 1097 aa5.19□□□□□ -1.58
PTCD3-216ENST00000487043 ZMAT4Q9H898 229 aa5.19□□□□□ -1.58
PTCD3-216ENST00000487043 ARNT2Q9HBZ2 717 aa5.19□□□□□ -1.58
PTCD3-216ENST00000487043 TCF7L1Q9HCS4 588 aa5.19□□□□□ -1.58
PTCD3-216ENST00000487043 ZBTB21Q9ULJ3 1066 aa5.19□□□□□ -1.58
PTCD3-216ENST00000487043 INVSQ9Y283 1065 aa5.19□□□□□ -1.58
PTCD3-216ENST00000487043 PCDHGA9Q9Y5G4 932 aaKnown RBP5.19□□□□□ -1.58
PTCD3-216ENST00000487043 PCDHGA8Q9Y5G5 932 aa5.19□□□□□ -1.58
PTCD3-216ENST00000487043 PCDHGA7Q9Y5G6 932 aa5.19□□□□□ -1.58
PTCD3-216ENST00000487043 PCDHGA6Q9Y5G7 932 aa5.19□□□□□ -1.58
PTCD3-216ENST00000487043 PCDHGA3Q9Y5H0 932 aa5.19□□□□□ -1.58
PTCD3-216ENST00000487043 PCDHGA2Q9Y5H1 932 aa5.19□□□□□ -1.58
PTCD3-216ENST00000487043 TAF6LQ9Y6J9 622 aa5.19□□□□□ -1.58
PTCD3-216ENST00000487043 DISP1Q96F81 1524 aa5.18□□□□□ -1.58
PTCD3-216ENST00000487043 FHOD3Q2V2M9 1422 aa5.18□□□□□ -1.58
PTCD3-216ENST00000487043 FMN1Q68DA7 1419 aa5.18□□□□□ -1.58
PTCD3-216ENST00000487043 KLHL33A6NCF5 533 aa5.18□□□□□ -1.58
PTCD3-216ENST00000487043 LTFP02788 710 aa5.18□□□□□ -1.58
PTCD3-216ENST00000487043 CYP17A1P05093 508 aa5.18□□□□□ -1.58
PTCD3-216ENST00000487043 U2AF1L5P0DN76 240 aaPredicted RBP5.18□□□□□ -1.58
PTCD3-216ENST00000487043 PRKCAP17252 672 aa5.18□□□□□ -1.58
PTCD3-216ENST00000487043 CORO7P57737 925 aa5.18□□□□□ -1.58
PTCD3-216ENST00000487043 RBM10P98175 930 aaKnown RBP5.18□□□□□ -1.58
PTCD3-216ENST00000487043 U2AF1Q01081 240 aaKnown RBP eCLIP5.18□□□□□ -1.584e-6■■■□□ 19.2
PTCD3-216ENST00000487043 MVKQ03426 396 aa5.18□□□□□ -1.58
PTCD3-216ENST00000487043 BIRC2Q13490 618 aa5.18□□□□□ -1.58
PTCD3-216ENST00000487043 UBE4AQ14139 1066 aa5.18□□□□□ -1.58
PTCD3-216ENST00000487043 MINDY4Q4G0A6 757 aa5.18□□□□□ -1.58
PTCD3-216ENST00000487043 TMEM240Q5SV17 173 aa5.18□□□□□ -1.58
PTCD3-216ENST00000487043 EFCAB2Q5VUJ9 269 aa5.18□□□□□ -1.58
PTCD3-216ENST00000487043 BTBD8Q5XKL5 378 aa5.18□□□□□ -1.58
PTCD3-216ENST00000487043 ESRP1Q6NXG1 681 aaKnown RBP5.18□□□□□ -1.58
PTCD3-216ENST00000487043 CC2D1AQ6P1N0 951 aaPredicted RBP5.18□□□□□ -1.58
PTCD3-216ENST00000487043 GALNT18Q6P9A2 607 aa5.18□□□□□ -1.58
PTCD3-216ENST00000487043 TTLL7Q6ZT98 887 aa5.18□□□□□ -1.58
PTCD3-216ENST00000487043 KCTD1Q719H9 257 aa5.18□□□□□ -1.58
PTCD3-216ENST00000487043 EXOC8Q8IYI6 725 aa5.18□□□□□ -1.58
PTCD3-216ENST00000487043 MORC4Q8TE76 937 aa5.18□□□□□ -1.58
PTCD3-216ENST00000487043 RTF1Q92541 710 aaKnown RBP5.18□□□□□ -1.58
PTCD3-216ENST00000487043 CLIP3Q96DZ5 547 aa5.18□□□□□ -1.58
PTCD3-216ENST00000487043 HSPBAP1Q96EW2 488 aa5.18□□□□□ -1.58
PTCD3-216ENST00000487043 KRTAP4-11Q9BYQ6 195 aa5.18□□□□□ -1.58
PTCD3-216ENST00000487043 DCP1AQ9NPI6 582 aaPredicted RBP5.18□□□□□ -1.58
PTCD3-216ENST00000487043 PDLIM7Q9NR12 457 aa5.18□□□□□ -1.58
PTCD3-216ENST00000487043 KCNH7Q9NS40 1196 aa5.18□□□□□ -1.58
PTCD3-216ENST00000487043 RIC8BQ9NVN3 520 aa5.18□□□□□ -1.58
PTCD3-216ENST00000487043 C19orf73Q9NVV2 129 aa5.18□□□□□ -1.58
PTCD3-216ENST00000487043 OBP2AQ9NY56 170 aa5.18□□□□□ -1.58
PTCD3-216ENST00000487043 PNMA8BQ9ULN7 279 aaPredicted RBP5.18□□□□□ -1.58
PTCD3-216ENST00000487043 NUB1Q9Y5A7 615 aa5.18□□□□□ -1.58
PTCD3-216ENST00000487043 LOC102724159A0A0B4J2E5 919 aa5.17□□□□□ -1.58
PTCD3-216ENST00000487043 TRIM75PA6NK02 468 aa5.17□□□□□ -1.58
PTCD3-216ENST00000487043 B8ZZF3 427 aa5.17□□□□□ -1.58
PTCD3-216ENST00000487043 PRRG2O14669 202 aa5.17□□□□□ -1.58
PTCD3-216ENST00000487043 BUB1BO60566 1050 aaPredicted RBP5.17□□□□□ -1.58
PTCD3-216ENST00000487043 MAFKO60675 156 aa5.17□□□□□ -1.58
PTCD3-216ENST00000487043 RAC2P15153 192 aa5.17□□□□□ -1.58
PTCD3-216ENST00000487043 CYP2C19P33261 490 aa5.17□□□□□ -1.58
PTCD3-216ENST00000487043 HK2P52789 917 aa5.17□□□□□ -1.58
PTCD3-216ENST00000487043 KRT85P78386 507 aa5.17□□□□□ -1.58
PTCD3-216ENST00000487043 HTRA3P83110 453 aa5.17□□□□□ -1.58
PTCD3-216ENST00000487043 TUSC3Q13454 348 aa5.17□□□□□ -1.58
PTCD3-216ENST00000487043 HLTFQ14527 1009 aaKnown RBP eCLIP5.17□□□□□ -1.58
PTCD3-216ENST00000487043 PWP2Q15269 919 aaKnown RBP5.17□□□□□ -1.58
PTCD3-216ENST00000487043 CHRNA2Q15822 529 aa5.17□□□□□ -1.58
PTCD3-216ENST00000487043 SYCP2LQ5T4T6 812 aa5.17□□□□□ -1.58
PTCD3-216ENST00000487043 GORABQ5T7V8 394 aa5.17□□□□□ -1.58
PTCD3-216ENST00000487043 DGKHQ86XP1 1220 aa5.17□□□□□ -1.58
PTCD3-216ENST00000487043 ZZZ3Q8IYH5 903 aa5.17□□□□□ -1.58
PTCD3-216ENST00000487043 CMTR2Q8IYT2 770 aaKnown RBP5.17□□□□□ -1.58
PTCD3-216ENST00000487043 ANKS4BQ8N8V4 417 aa5.17□□□□□ -1.58
PTCD3-216ENST00000487043 ALPK1Q96QP1 1244 aa5.17□□□□□ -1.58
PTCD3-216ENST00000487043 RPS6KC1Q96S38 1066 aa5.17□□□□□ -1.58
PTCD3-216ENST00000487043 PLCD4Q9BRC7 762 aa5.17□□□□□ -1.58
PTCD3-216ENST00000487043 EPB41L4BQ9H329 900 aa5.17□□□□□ -1.58
PTCD3-216ENST00000487043 SMOC1Q9H4F8 434 aa5.17□□□□□ -1.58
PTCD3-216ENST00000487043 CCM2LQ9NUG4 571 aaPredicted RBP5.17□□□□□ -1.58
PTCD3-216ENST00000487043 MSRAQ9UJ68 235 aa5.17□□□□□ -1.58
PTCD3-216ENST00000487043 TMEM59LQ9UK28 342 aa5.17□□□□□ -1.58
PTCD3-216ENST00000487043 TELO2Q9Y4R8 837 aa5.17□□□□□ -1.58
PTCD3-216ENST00000487043 CLASP1Q7Z460 1538 aa5.17□□□□□ -1.58
PTCD3-216ENST00000487043 KIAA0556O60303 1618 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms