RNA–Protein interactions for RNA: ENST00000486758.5

SHROOM3-208, Transcript of shroom family member 3, humanhuman

TSL 2

Gene SHROOM3, Length 3,766 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-208ENST00000486758 KLHDC7AQ5VTJ3 777 aa13.4□□□□□ -0.26
SHROOM3-208ENST00000486758 KDM7AQ6ZMT4 941 aa13.4□□□□□ -0.26
SHROOM3-208ENST00000486758 CAPN12Q6ZSI9 719 aa13.4□□□□□ -0.26
SHROOM3-208ENST00000486758 TBC1D16Q8TBP0 767 aa13.4□□□□□ -0.26
SHROOM3-208ENST00000486758 AK8Q96MA6 479 aa13.4□□□□□ -0.26
SHROOM3-208ENST00000486758 TDRD3Q9H7E2 651 aaKnown RBP13.4□□□□□ -0.26
SHROOM3-208ENST00000486758 ACTR5Q9H9F9 607 aaPredicted RBP13.4□□□□□ -0.26
SHROOM3-208ENST00000486758 EMILIN3Q9NT22 766 aa13.4□□□□□ -0.26
SHROOM3-208ENST00000486758 DONSONQ9NYP3 566 aa13.4□□□□□ -0.26
SHROOM3-208ENST00000486758 POLLQ9UGP5 575 aa13.4□□□□□ -0.26
SHROOM3-208ENST00000486758 COL16A1Q07092 1604 aaPredicted RBP13.4□□□□□ -0.26
SHROOM3-208ENST00000486758 H0Y3Z8 333 aa13.4□□□□□ -0.26
SHROOM3-208ENST00000486758 GALNT17Q6IS24 598 aa13.4□□□□□ -0.26
SHROOM3-208ENST00000486758 PCDHAC2Q9Y5I4 1007 aa13.4□□□□□ -0.26
SHROOM3-208ENST00000486758 KIF1AQ12756 1690 aa13.4□□□□□ -0.26
SHROOM3-208ENST00000486758 A0A1W2PRG0 241 aa13.4□□□□□ -0.27
SHROOM3-208ENST00000486758 DIAPH2O60879 1101 aa13.4□□□□□ -0.27
SHROOM3-208ENST00000486758 UPP2O95045 317 aa13.4□□□□□ -0.27
SHROOM3-208ENST00000486758 LACTBP83111 547 aaPredicted RBP13.4□□□□□ -0.27
SHROOM3-208ENST00000486758 NPY5RQ15761 445 aa13.4□□□□□ -0.27
SHROOM3-208ENST00000486758 CDC37Q16543 378 aaPredicted RBP13.4□□□□□ -0.27
SHROOM3-208ENST00000486758 SBK1Q52WX2 424 aa13.4□□□□□ -0.27
SHROOM3-208ENST00000486758 HOOK3Q86VS8 718 aa13.4□□□□□ -0.27
SHROOM3-208ENST00000486758 RAPGEF5Q92565 580 aa13.4□□□□□ -0.27
SHROOM3-208ENST00000486758 SGSM3Q96HU1 749 aa13.4□□□□□ -0.27
SHROOM3-208ENST00000486758 FMO2Q99518 471 aa13.4□□□□□ -0.27
SHROOM3-208ENST00000486758 COL4A3BPQ9Y5P4 624 aa13.4□□□□□ -0.27
SHROOM3-208ENST00000486758 RHOBTB3O94955 611 aa13.39□□□□□ -0.27
SHROOM3-208ENST00000486758 XRCC5P13010 732 aaKnown RBP13.39□□□□□ -0.27
SHROOM3-208ENST00000486758 EEF2P13639 858 aaKnown RBP13.39□□□□□ -0.27
SHROOM3-208ENST00000486758 COASYQ13057 564 aa13.39□□□□□ -0.27
SHROOM3-208ENST00000486758 QRICH1Q2TAL8 776 aa13.39□□□□□ -0.27
SHROOM3-208ENST00000486758 SWT1Q5T5J6 900 aaKnown RBP13.39□□□□□ -0.27
SHROOM3-208ENST00000486758 ALKBH5Q6P6C2 394 aaKnown RBP13.39□□□□□ -0.27
SHROOM3-208ENST00000486758 KCNK18Q7Z418 384 aa13.39□□□□□ -0.27
SHROOM3-208ENST00000486758 NSMCE1Q8WV22 266 aa13.39□□□□□ -0.27
SHROOM3-208ENST00000486758 STAMBPL1Q96FJ0 436 aa13.39□□□□□ -0.27
SHROOM3-208ENST00000486758 PSMD1Q99460 953 aa13.39□□□□□ -0.27
SHROOM3-208ENST00000486758 RGL1Q9NZL6 768 aa13.39□□□□□ -0.27
SHROOM3-208ENST00000486758 NOC2LQ9Y3T9 749 aaKnown RBP13.39□□□□□ -0.27
SHROOM3-208ENST00000486758 BAZ2AQ9UIF9 1905 aaKnown RBP13.39□□□□□ -0.27
SHROOM3-208ENST00000486758 GFPT2O94808 682 aa13.39□□□□□ -0.27
SHROOM3-208ENST00000486758 CPP00450 1065 aa13.39□□□□□ -0.27
SHROOM3-208ENST00000486758 SCTRP47872 440 aa13.39□□□□□ -0.27
SHROOM3-208ENST00000486758 SMTNP53814 917 aa13.39□□□□□ -0.27
SHROOM3-208ENST00000486758 MTMR3Q13615 1198 aa13.39□□□□□ -0.27
SHROOM3-208ENST00000486758 HS2ST1Q7LGA3 356 aa13.39□□□□□ -0.27
SHROOM3-208ENST00000486758 VSIG1Q86XK7 387 aa13.39□□□□□ -0.27
SHROOM3-208ENST00000486758 CCDC105Q8IYK2 499 aa13.39□□□□□ -0.27
SHROOM3-208ENST00000486758 PCIF1Q9H4Z3 704 aa13.39□□□□□ -0.27
SHROOM3-208ENST00000486758 AZI2Q9H6S1 392 aa13.39□□□□□ -0.27
SHROOM3-208ENST00000486758 KCNQ5Q9NR82 932 aa13.39□□□□□ -0.27
SHROOM3-208ENST00000486758 MTMR4Q9NYA4 1195 aa13.39□□□□□ -0.27
SHROOM3-208ENST00000486758 CHORDC1Q9UHD1 332 aaPredicted RBP13.39□□□□□ -0.27
SHROOM3-208ENST00000486758 MYH10P35580 1976 aa13.39□□□□□ -0.27
SHROOM3-208ENST00000486758 SERPING1P05155 500 aa13.39□□□□□ -0.27
SHROOM3-208ENST00000486758 ITGA4P13612 1032 aa13.39□□□□□ -0.27
SHROOM3-208ENST00000486758 ERFP50548 548 aa13.39□□□□□ -0.27
SHROOM3-208ENST00000486758 GRIPAP1Q4V328 841 aa13.39□□□□□ -0.27
SHROOM3-208ENST00000486758 PDXDC1Q6P996 788 aa13.39□□□□□ -0.27
SHROOM3-208ENST00000486758 CCSER1Q9C0I3 900 aa13.39□□□□□ -0.27
SHROOM3-208ENST00000486758 SEMA6BQ9H3T3 888 aa13.39□□□□□ -0.27
SHROOM3-208ENST00000486758 NHSL1Q5SYE7 1610 aa13.38□□□□□ -0.27
SHROOM3-208ENST00000486758 ANKRD62A6NC57 917 aa13.38□□□□□ -0.27
SHROOM3-208ENST00000486758 LAD1O00515 517 aa13.38□□□□□ -0.27
SHROOM3-208ENST00000486758 SHOX2O60902 331 aaPredicted RBP13.38□□□□□ -0.27
SHROOM3-208ENST00000486758 FLOT1O75955 427 aa13.38□□□□□ -0.27
SHROOM3-208ENST00000486758 GH2P01242 217 aa13.38□□□□□ -0.27
SHROOM3-208ENST00000486758 H2AFZP0C0S5 128 aa13.38□□□□□ -0.27
SHROOM3-208ENST00000486758 SEPT7Q16181 437 aaKnown RBP13.38□□□□□ -0.27
SHROOM3-208ENST00000486758 CCDC6Q16204 474 aa13.38□□□□□ -0.27
SHROOM3-208ENST00000486758 ASPRV1Q53RT3 343 aa13.38□□□□□ -0.27
SHROOM3-208ENST00000486758 UNC13DQ70J99 1090 aa13.38□□□□□ -0.27
SHROOM3-208ENST00000486758 H2AFVQ71UI9 128 aa13.38□□□□□ -0.27
SHROOM3-208ENST00000486758 FBXO11Q86XK2 927 aa13.38□□□□□ -0.27
SHROOM3-208ENST00000486758 ZNF507Q8TCN5 953 aa13.38□□□□□ -0.27
SHROOM3-208ENST00000486758 SH3GL2Q99962 352 aa13.38□□□□□ -0.27
SHROOM3-208ENST00000486758 SH3GLB2Q9NR46 395 aa13.38□□□□□ -0.27
SHROOM3-208ENST00000486758 AMFRQ9UKV5 643 aa13.38□□□□□ -0.27
SHROOM3-208ENST00000486758 C4AP0C0L4 1744 aa13.38□□□□□ -0.27
SHROOM3-208ENST00000486758 C4BP0C0L5 1744 aa13.38□□□□□ -0.27
SHROOM3-208ENST00000486758 PALM3A6NDB9 673 aaPredicted RBP13.38□□□□□ -0.27
SHROOM3-208ENST00000486758 DCDC2CA8MYV0 355 aa13.38□□□□□ -0.27
SHROOM3-208ENST00000486758 RAD17O75943 681 aa13.38□□□□□ -0.27
SHROOM3-208ENST00000486758 EPB41P11171 864 aaKnown RBP13.38□□□□□ -0.27
SHROOM3-208ENST00000486758 MYCLP12524 364 aaPredicted RBP13.38□□□□□ -0.27
SHROOM3-208ENST00000486758 ERVK-9P63128 1117 aa13.38□□□□□ -0.27
SHROOM3-208ENST00000486758 NUGGCQ68CJ6 796 aa13.38□□□□□ -0.27
SHROOM3-208ENST00000486758 PHLDB2Q86SQ0 1253 aa13.38□□□□□ -0.27
SHROOM3-208ENST00000486758 FUKQ8N0W3 1084 aa13.38□□□□□ -0.27
SHROOM3-208ENST00000486758 LMBR1Q8WVP7 490 aa13.38□□□□□ -0.27
SHROOM3-208ENST00000486758 CSRNP1Q96S65 589 aa13.38□□□□□ -0.27
SHROOM3-208ENST00000486758 ANO3Q9BYT9 981 aa13.38□□□□□ -0.27
SHROOM3-208ENST00000486758 ADAM33Q9BZ11 813 aa13.38□□□□□ -0.27
SHROOM3-208ENST00000486758 PNMA6FA0A0J9YX94 578 aa13.37□□□□□ -0.27
SHROOM3-208ENST00000486758 EXOC3O60645 756 aa13.37□□□□□ -0.27
SHROOM3-208ENST00000486758 ACSL3O95573 720 aa13.37□□□□□ -0.27
SHROOM3-208ENST00000486758 PDHA1P08559 390 aa13.37□□□□□ -0.27
SHROOM3-208ENST00000486758 MMP10P09238 476 aa13.37□□□□□ -0.27
SHROOM3-208ENST00000486758 CHN1P15882 459 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms