RNA–Protein interactions for RNA: ENST00000486741.5

HMGN1-216, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 4,299 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-216ENST00000486741 NPEPPSP55786 919 aa14.38□□□□□ -0.11
HMGN1-216ENST00000486741 SUPT20HL1Q3ZLR7 823 aa14.38□□□□□ -0.11
HMGN1-216ENST00000486741 PDXDC1Q6P996 788 aa14.38□□□□□ -0.11
HMGN1-216ENST00000486741 GJB7Q6PEY0 223 aa14.38□□□□□ -0.11
HMGN1-216ENST00000486741 NOA1Q8NC60 698 aaKnown RBP14.38□□□□□ -0.11
HMGN1-216ENST00000486741 ZKSCAN4Q969J2 545 aaPredicted RBP14.38□□□□□ -0.11
HMGN1-216ENST00000486741 RUSC1Q9BVN2 902 aa14.38□□□□□ -0.11
HMGN1-216ENST00000486741 INO80BQ9C086 356 aaPredicted RBP14.38□□□□□ -0.11
HMGN1-216ENST00000486741 LACRTQ9GZZ8 138 aa14.38□□□□□ -0.11
HMGN1-216ENST00000486741 MTRF1LQ9UGC7 380 aaKnown RBP14.38□□□□□ -0.11
HMGN1-216ENST00000486741 PTPN22Q9Y2R2 807 aa14.38□□□□□ -0.11
HMGN1-216ENST00000486741 ZBTB39O15060 712 aa14.38□□□□□ -0.11
HMGN1-216ENST00000486741 P4HBP07237 508 aaKnown RBP14.38□□□□□ -0.11
HMGN1-216ENST00000486741 RPA1P27694 616 aa14.38□□□□□ -0.11
HMGN1-216ENST00000486741 GBP2P32456 591 aaPredicted RBP14.38□□□□□ -0.11
HMGN1-216ENST00000486741 PDE6CP51160 858 aa14.38□□□□□ -0.11
HMGN1-216ENST00000486741 VSNL1P62760 191 aa14.38□□□□□ -0.11
HMGN1-216ENST00000486741 PLA2G4FQ68DD2 849 aa14.38□□□□□ -0.11
HMGN1-216ENST00000486741 LMBRD2Q68DH5 695 aaPredicted RBP14.38□□□□□ -0.11
HMGN1-216ENST00000486741 C10orf67Q8IYJ2 551 aa14.38□□□□□ -0.11
HMGN1-216ENST00000486741 NAP1L3Q99457 506 aaPredicted RBP14.38□□□□□ -0.11
HMGN1-216ENST00000486741 GAKO14976 1311 aa14.38□□□□□ -0.11
HMGN1-216ENST00000486741 ARP10275 920 aa14.38□□□□□ -0.11
HMGN1-216ENST00000486741 CXCL9Q07325 125 aa14.38□□□□□ -0.11
HMGN1-216ENST00000486741 DRAP1Q14919 205 aaPredicted RBP14.38□□□□□ -0.11
HMGN1-216ENST00000486741 MS4A14Q96JA4 679 aa14.38□□□□□ -0.11
HMGN1-216ENST00000486741 TMEM206Q9H813 350 aa14.38□□□□□ -0.11
HMGN1-216ENST00000486741 MYOZ2Q9NPC6 264 aa14.38□□□□□ -0.11
HMGN1-216ENST00000486741 ITIH6Q6UXX5 1313 aa14.38□□□□□ -0.11
HMGN1-216ENST00000486741 FGRP09769 529 aa14.37□□□□□ -0.11
HMGN1-216ENST00000486741 KRT71Q3SY84 523 aa14.37□□□□□ -0.11
HMGN1-216ENST00000486741 VTI1AQ96AJ9 217 aa14.37□□□□□ -0.11
HMGN1-216ENST00000486741 MTRQ99707 1265 aa14.37□□□□□ -0.11
HMGN1-216ENST00000486741 DEFB129Q9H1M3 183 aa14.37□□□□□ -0.11
HMGN1-216ENST00000486741 BLOC1S4Q9NUP1 217 aa14.37□□□□□ -0.11
HMGN1-216ENST00000486741 DISP2A7MBM2 1401 aa14.37□□□□□ -0.11
HMGN1-216ENST00000486741 DENND3A2RUS2 1198 aa14.37□□□□□ -0.11
HMGN1-216ENST00000486741 HGSO14964 777 aaPredicted RBP14.37□□□□□ -0.11
HMGN1-216ENST00000486741 GMPSP49915 693 aaPredicted RBP14.37□□□□□ -0.11
HMGN1-216ENST00000486741 ANGEL2Q5VTE6 544 aaKnown RBP14.37□□□□□ -0.11
HMGN1-216ENST00000486741 ZNF653Q96CK0 615 aa14.37□□□□□ -0.11
HMGN1-216ENST00000486741 FAM204AQ9H8W3 233 aa14.37□□□□□ -0.11
HMGN1-216ENST00000486741 KCNK9Q9NPC2 374 aa14.37□□□□□ -0.11
HMGN1-216ENST00000486741 EHD2Q9NZN4 543 aa14.37□□□□□ -0.11
HMGN1-216ENST00000486741 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.37□□□□□ -0.11
HMGN1-216ENST00000486741 SCN11AQ9UI33 1791 aa14.37□□□□□ -0.11
HMGN1-216ENST00000486741 LMNB1P20700 586 aa14.37□□□□□ -0.11
HMGN1-216ENST00000486741 ACTN2P35609 894 aa14.37□□□□□ -0.11
HMGN1-216ENST00000486741 CASP4P49662 377 aa14.37□□□□□ -0.11
HMGN1-216ENST00000486741 ANKRD7Q92527 254 aa14.37□□□□□ -0.11
HMGN1-216ENST00000486741 TNFRSF25Q93038 417 aa14.37□□□□□ -0.11
HMGN1-216ENST00000486741 AKT1S1Q96B36 256 aa14.37□□□□□ -0.11
HMGN1-216ENST00000486741 FHOD1Q9Y613 1164 aa14.37□□□□□ -0.11
HMGN1-216ENST00000486741 C5P01031 1676 aa14.37□□□□□ -0.11
HMGN1-216ENST00000486741 PARP4Q9UKK3 1724 aaKnown RBP14.36□□□□□ -0.11
HMGN1-216ENST00000486741 WDR64B1ANS9 1081 aa14.36□□□□□ -0.11
HMGN1-216ENST00000486741 FAM86B1E9PN63 330 aa14.36□□□□□ -0.11
HMGN1-216ENST00000486741 FAM86B2P0C5J1 330 aa14.36□□□□□ -0.11
HMGN1-216ENST00000486741 TMOD1P28289 359 aa14.36□□□□□ -0.11
HMGN1-216ENST00000486741 INPP5BP32019 993 aa14.36□□□□□ -0.11
HMGN1-216ENST00000486741 SSTR3P32745 418 aaPredicted RBP14.36□□□□□ -0.11
HMGN1-216ENST00000486741 PIK3CAP42336 1068 aa14.36□□□□□ -0.11
HMGN1-216ENST00000486741 ZNF394Q53GI3 561 aa14.36□□□□□ -0.11
HMGN1-216ENST00000486741 PAF1Q8N7H5 531 aa14.36□□□□□ -0.11
HMGN1-216ENST00000486741 ATG4CQ96DT6 458 aa14.36□□□□□ -0.11
HMGN1-216ENST00000486741 DUSP9Q99956 384 aaKnown RBP14.36□□□□□ -0.11
HMGN1-216ENST00000486741 NFU1Q9UMS0 254 aa14.36□□□□□ -0.11
HMGN1-216ENST00000486741 CTNNA1P35221 906 aaKnown RBP14.36□□□□□ -0.11
HMGN1-216ENST00000486741 GPR162Q16538 588 aa14.36□□□□□ -0.11
HMGN1-216ENST00000486741 LIN9Q5TKA1 542 aa14.36□□□□□ -0.11
HMGN1-216ENST00000486741 XXYLT1Q8NBI6 393 aa14.36□□□□□ -0.11
HMGN1-216ENST00000486741 OSBPL9Q96SU4 736 aa14.36□□□□□ -0.11
HMGN1-216ENST00000486741 EBAG9O00559 213 aa14.36□□□□□ -0.11
HMGN1-216ENST00000486741 NDUFAB1O14561 156 aa14.36□□□□□ -0.11
HMGN1-216ENST00000486741 N4BP1O75113 896 aaKnown RBP14.36□□□□□ -0.11
HMGN1-216ENST00000486741 IFNB1P01574 187 aa14.36□□□□□ -0.11
HMGN1-216ENST00000486741 CD58P19256 250 aa14.36□□□□□ -0.11
HMGN1-216ENST00000486741 KCTD2Q14681 263 aa14.36□□□□□ -0.11
HMGN1-216ENST00000486741 EPHA7Q15375 998 aa14.36□□□□□ -0.11
HMGN1-216ENST00000486741 ZNF365Q70YC5 407 aa14.36□□□□□ -0.11
HMGN1-216ENST00000486741 HAUS6Q7Z4H7 955 aa14.36□□□□□ -0.11
HMGN1-216ENST00000486741 FAM213AQ9BRX8 229 aa14.36□□□□□ -0.11
HMGN1-216ENST00000486741 KCNH7Q9NS40 1196 aa14.36□□□□□ -0.11
HMGN1-216ENST00000486741 AGTPBP1Q9UPW5 1226 aa14.36□□□□□ -0.11
HMGN1-216ENST00000486741 GOLGA6L7A0A1B0GV03 622 aa14.35□□□□□ -0.11
HMGN1-216ENST00000486741 A0A1W2PRG0 241 aa14.35□□□□□ -0.11
HMGN1-216ENST00000486741 NFIBO00712 420 aa14.35□□□□□ -0.11
HMGN1-216ENST00000486741 HDLBPQ00341 1268 aaKnown RBP14.35□□□□□ -0.11
HMGN1-216ENST00000486741 ZNF211Q13398 564 aaPredicted RBP14.35□□□□□ -0.11
HMGN1-216ENST00000486741 SNX1Q13596 522 aa14.35□□□□□ -0.11
HMGN1-216ENST00000486741 TAAR1Q96RJ0 339 aa14.35□□□□□ -0.11
HMGN1-216ENST00000486741 CHORDC1Q9UHD1 332 aaPredicted RBP14.35□□□□□ -0.11
HMGN1-216ENST00000486741 EMSYQ7Z589 1322 aa14.35□□□□□ -0.11
HMGN1-216ENST00000486741 K7ERI5 159 aa14.35□□□□□ -0.11
HMGN1-216ENST00000486741 MFAP3P55082 362 aa14.35□□□□□ -0.11
HMGN1-216ENST00000486741 RPS6P62753 249 aaKnown RBP14.35□□□□□ -0.11
HMGN1-216ENST00000486741 TFAMQ00059 246 aaKnown RBP14.35□□□□□ -0.11
HMGN1-216ENST00000486741 KAZNQ674X7 775 aa14.35□□□□□ -0.11
HMGN1-216ENST00000486741 DPY19L2Q6NUT2 758 aa14.35□□□□□ -0.11
HMGN1-216ENST00000486741 OTUD5Q96G74 571 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms