RNA–Protein interactions for RNA: ENST00000485749.1

RTN4-213, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 832 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-213ENST00000485749 CD96P40200 585 aa5.17□□□□□ -1.58
RTN4-213ENST00000485749 PRPHP41219 470 aa5.17□□□□□ -1.58
RTN4-213ENST00000485749 UBA7P41226 1012 aa5.17□□□□□ -1.58
RTN4-213ENST00000485749 LSSP48449 732 aa5.17□□□□□ -1.58
RTN4-213ENST00000485749 RENBPP51606 427 aa5.17□□□□□ -1.58
RTN4-213ENST00000485749 DSG1Q02413 1049 aa5.17□□□□□ -1.58
RTN4-213ENST00000485749 SLC20A2Q08357 652 aa5.17□□□□□ -1.58
RTN4-213ENST00000485749 MESP2Q0VG99 397 aa5.17□□□□□ -1.58
RTN4-213ENST00000485749 GTF2H3Q13889 308 aa5.17□□□□□ -1.58
RTN4-213ENST00000485749 TESK1Q15569 626 aa5.17□□□□□ -1.58
RTN4-213ENST00000485749 NKG7Q16617 165 aa5.17□□□□□ -1.58
RTN4-213ENST00000485749 PIK3R6Q5UE93 754 aa5.17□□□□□ -1.58
RTN4-213ENST00000485749 IQSEC1Q6DN90 963 aa5.17□□□□□ -1.58
RTN4-213ENST00000485749 SWSAP1Q6NVH7 229 aa5.17□□□□□ -1.58
RTN4-213ENST00000485749 SIAH1Q8IUQ4 282 aa5.17□□□□□ -1.58
RTN4-213ENST00000485749 ZNF713Q8N859 430 aaPredicted RBP5.17□□□□□ -1.58
RTN4-213ENST00000485749 MIGA1Q8NAN2 632 aa5.17□□□□□ -1.58
RTN4-213ENST00000485749 SMC1BQ8NDV3 1235 aa5.17□□□□□ -1.58
RTN4-213ENST00000485749 PJA1Q8NG27 643 aa5.17□□□□□ -1.58
RTN4-213ENST00000485749 SMCR8Q8TEV9 937 aaPredicted RBP5.17□□□□□ -1.58
RTN4-213ENST00000485749 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.17□□□□□ -1.58
RTN4-213ENST00000485749 PPP1R13LQ8WUF5 828 aa5.17□□□□□ -1.58
RTN4-213ENST00000485749 C1orf159Q96HA4 380 aa5.17□□□□□ -1.58
RTN4-213ENST00000485749 SARGQ9BW04 601 aa5.17□□□□□ -1.58
RTN4-213ENST00000485749 ASPNQ9BXN1 380 aa5.17□□□□□ -1.58
RTN4-213ENST00000485749 DBNDD1Q9H9R9 158 aa5.17□□□□□ -1.58
RTN4-213ENST00000485749 PDRG1Q9NUG6 133 aa5.17□□□□□ -1.58
RTN4-213ENST00000485749 CHCHD3Q9NX63 227 aaKnown RBP5.17□□□□□ -1.58
RTN4-213ENST00000485749 SAMD15Q9P1V8 674 aa5.17□□□□□ -1.58
RTN4-213ENST00000485749 RABL2AQ9UBK7 228 aaPredicted RBP5.17□□□□□ -1.58
RTN4-213ENST00000485749 FBXO10Q9UK96 956 aa5.17□□□□□ -1.58
RTN4-213ENST00000485749 PCDHB12Q9Y5F1 795 aa5.17□□□□□ -1.58
RTN4-213ENST00000485749 H0Y3Z8 333 aa5.16□□□□□ -1.58
RTN4-213ENST00000485749 CBX4O00257 560 aa5.16□□□□□ -1.58
RTN4-213ENST00000485749 FOXN3O00409 490 aaPredicted RBP5.16□□□□□ -1.58
RTN4-213ENST00000485749 NFIBO00712 420 aa5.16□□□□□ -1.58
RTN4-213ENST00000485749 ERC2O15083 957 aa5.16□□□□□ -1.58
RTN4-213ENST00000485749 PRPF3O43395 683 aaKnown RBP5.16□□□□□ -1.58
RTN4-213ENST00000485749 GAS7O60861 476 aa5.16□□□□□ -1.58
RTN4-213ENST00000485749 TMCC2O75069 709 aa5.16□□□□□ -1.58
RTN4-213ENST00000485749 PRKD3O94806 890 aa5.16□□□□□ -1.58
RTN4-213ENST00000485749 LRIG2O94898 1065 aa5.16□□□□□ -1.58
RTN4-213ENST00000485749 SNUPNO95149 360 aaKnown RBP5.16□□□□□ -1.58
RTN4-213ENST00000485749 FKBP9O95302 570 aa5.16□□□□□ -1.58
RTN4-213ENST00000485749 BAG2O95816 211 aa5.16□□□□□ -1.58
RTN4-213ENST00000485749 AGR2O95994 175 aa5.16□□□□□ -1.58
RTN4-213ENST00000485749 GLI1P08151 1106 aa5.16□□□□□ -1.58
RTN4-213ENST00000485749 SNRPB2P08579 225 aaKnown RBP5.16□□□□□ -1.58
RTN4-213ENST00000485749 PAX7P23759 505 aa5.16□□□□□ -1.58
RTN4-213ENST00000485749 CCND1P24385 295 aa5.16□□□□□ -1.58
RTN4-213ENST00000485749 CYP2C19P33261 490 aa5.16□□□□□ -1.58
RTN4-213ENST00000485749 ATP6V1E1P36543 226 aa5.16□□□□□ -1.58
RTN4-213ENST00000485749 RECQLP46063 649 aaPredicted RBP5.16□□□□□ -1.58
RTN4-213ENST00000485749 RGS3P49796 1198 aa5.16□□□□□ -1.58
RTN4-213ENST00000485749 COPAP53621 1224 aa5.16□□□□□ -1.58
RTN4-213ENST00000485749 ZNF445P59923 1031 aa5.16□□□□□ -1.58
RTN4-213ENST00000485749 GBX1Q14549 363 aa5.16□□□□□ -1.58
RTN4-213ENST00000485749 PLCB4Q15147 1175 aa5.16□□□□□ -1.58
RTN4-213ENST00000485749 PTPN21Q16825 1174 aa5.16□□□□□ -1.58
RTN4-213ENST00000485749 DACT2Q5SW24 774 aa5.16□□□□□ -1.58
RTN4-213ENST00000485749 NOL9Q5SY16 702 aaKnown RBP5.16□□□□□ -1.58
RTN4-213ENST00000485749 PRAMEF13Q5VWM6 474 aa5.16□□□□□ -1.58
RTN4-213ENST00000485749 HIBCHQ6NVY1 386 aaPredicted RBP5.16□□□□□ -1.58
RTN4-213ENST00000485749 CTR9Q6PD62 1173 aa5.16□□□□□ -1.58
RTN4-213ENST00000485749 C16orf54Q6UWD8 224 aa5.16□□□□□ -1.58
RTN4-213ENST00000485749 FKBP9P1Q75LS8 142 aa5.16□□□□□ -1.58
RTN4-213ENST00000485749 CCAR2Q8N163 923 aaKnown RBP5.16□□□□□ -1.58
RTN4-213ENST00000485749 CBARPQ8N350 705 aaPredicted RBP5.16□□□□□ -1.58
RTN4-213ENST00000485749 TMEM145Q8NBT3 493 aa5.16□□□□□ -1.58
RTN4-213ENST00000485749 GIMAP8Q8ND71 665 aaPredicted RBP5.16□□□□□ -1.58
RTN4-213ENST00000485749 NELL1Q92832 810 aa5.16□□□□□ -1.58
RTN4-213ENST00000485749 FUBP3Q96I24 572 aaKnown RBP eCLIP5.16□□□□□ -1.582e-9■■■□□ 15.2
RTN4-213ENST00000485749 KIRREL1Q96J84 757 aa5.16□□□□□ -1.58
RTN4-213ENST00000485749 TBATAQ96M53 351 aa5.16□□□□□ -1.58
RTN4-213ENST00000485749 STRBPQ96SI9 672 aaKnown RBP5.16□□□□□ -1.58
RTN4-213ENST00000485749 NUP88Q99567 741 aaPredicted RBP5.16□□□□□ -1.58
RTN4-213ENST00000485749 LGR4Q9BXB1 951 aa5.16□□□□□ -1.58
RTN4-213ENST00000485749 MRPL9Q9BYD2 267 aaKnown RBP5.16□□□□□ -1.58
RTN4-213ENST00000485749 ABCG4Q9H172 646 aa5.16□□□□□ -1.58
RTN4-213ENST00000485749 DEF6Q9H4E7 631 aa5.16□□□□□ -1.58
RTN4-213ENST00000485749 RMI1Q9H9A7 625 aa5.16□□□□□ -1.58
RTN4-213ENST00000485749 KIAA1586Q9HCI6 787 aa5.16□□□□□ -1.58
RTN4-213ENST00000485749 PRDM5Q9NQX1 630 aaPredicted RBP5.16□□□□□ -1.58
RTN4-213ENST00000485749 MRGBPQ9NV56 204 aa5.16□□□□□ -1.58
RTN4-213ENST00000485749 CPSF2Q9P2I0 782 aaKnown RBP5.16□□□□□ -1.58
RTN4-213ENST00000485749 SUN2Q9UH99 717 aa5.16□□□□□ -1.58
RTN4-213ENST00000485749 CTNND2Q9UQB3 1225 aa5.16□□□□□ -1.58
RTN4-213ENST00000485749 GIT1Q9Y2X7 761 aa5.16□□□□□ -1.58
RTN4-213ENST00000485749 SF3B6Q9Y3B4 125 aaKnown RBP5.16□□□□□ -1.58
RTN4-213ENST00000485749 DGKBQ9Y6T7 804 aa5.16□□□□□ -1.58
RTN4-213ENST00000485749 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.15□□□□□ -1.59
RTN4-213ENST00000485749 VSTM5A8MXK1 200 aa5.15□□□□□ -1.59
RTN4-213ENST00000485749 M0R2C6 588 aa5.15□□□□□ -1.59
RTN4-213ENST00000485749 ARVCFO00192 962 aa5.15□□□□□ -1.59
RTN4-213ENST00000485749 CFBP00751 764 aa5.15□□□□□ -1.59
RTN4-213ENST00000485749 RAC2P15153 192 aa5.15□□□□□ -1.59
RTN4-213ENST00000485749 KRT20P35900 424 aa5.15□□□□□ -1.59
RTN4-213ENST00000485749 ADCYAP1R1P41586 468 aa5.15□□□□□ -1.59
RTN4-213ENST00000485749 ID4P47928 161 aa5.15□□□□□ -1.59
RTN4-213ENST00000485749 KCNJ6P48051 423 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms