RNA–Protein interactions for RNA: ENST00000485067.1

USP16-206, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 2

Gene USP16, Length 2,259 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-206ENST00000485067 HDAC4P56524 1084 aa10.09□□□□□ -0.79
USP16-206ENST00000485067 EN1Q05925 392 aaPredicted RBP10.09□□□□□ -0.79
USP16-206ENST00000485067 CALCRLQ16602 461 aa10.09□□□□□ -0.79
USP16-206ENST00000485067 GNPTABQ3T906 1256 aa10.09□□□□□ -0.79
USP16-206ENST00000485067 GPATCH4Q5T3I0 446 aaKnown RBP10.09□□□□□ -0.79
USP16-206ENST00000485067 APOBEC3HQ6NTF7 200 aaKnown RBP10.09□□□□□ -0.79
USP16-206ENST00000485067 CCBE1Q6UXH8 406 aaPredicted RBP10.09□□□□□ -0.79
USP16-206ENST00000485067 LRRN4CLQ8ND94 238 aa10.09□□□□□ -0.79
USP16-206ENST00000485067 OR8K1Q8NGG5 319 aa10.09□□□□□ -0.79
USP16-206ENST00000485067 ZNF507Q8TCN5 953 aa10.09□□□□□ -0.79
USP16-206ENST00000485067 RABGGTAQ92696 567 aa10.09□□□□□ -0.79
USP16-206ENST00000485067 P2RX5Q93086 422 aa10.09□□□□□ -0.79
USP16-206ENST00000485067 ERP27Q96DN0 273 aa10.09□□□□□ -0.79
USP16-206ENST00000485067 NAP1L4Q99733 375 aaKnown RBP10.09□□□□□ -0.79
USP16-206ENST00000485067 GLT8D2Q9H1C3 349 aa10.09□□□□□ -0.79
USP16-206ENST00000485067 ZHX3Q9H4I2 956 aa10.09□□□□□ -0.79
USP16-206ENST00000485067 HOMER3Q9NSC5 361 aa10.09□□□□□ -0.79
USP16-206ENST00000485067 CLEC11AQ9Y240 323 aa10.09□□□□□ -0.79
USP16-206ENST00000485067 GJA3Q9Y6H8 435 aa10.09□□□□□ -0.79
USP16-206ENST00000485067 TNS1Q9HBL0 1735 aaKnown RBP10.09□□□□□ -0.79
USP16-206ENST00000485067 PVALEFA0A1B0GWK0 134 aa10.09□□□□□ -0.79
USP16-206ENST00000485067 HLA-DOAP06340 250 aa10.09□□□□□ -0.79
USP16-206ENST00000485067 TECP42680 631 aa10.09□□□□□ -0.79
USP16-206ENST00000485067 TCP10Q12799 353 aa10.09□□□□□ -0.79
USP16-206ENST00000485067 RCN1Q15293 331 aa10.09□□□□□ -0.79
USP16-206ENST00000485067 TMCO3Q6UWJ1 677 aa10.09□□□□□ -0.79
USP16-206ENST00000485067 SV2BQ7L1I2 683 aa10.09□□□□□ -0.79
USP16-206ENST00000485067 CSGALNACT2Q8N6G5 542 aa10.09□□□□□ -0.79
USP16-206ENST00000485067 CEP112Q8N8E3 955 aa10.09□□□□□ -0.79
USP16-206ENST00000485067 NEK11Q8NG66 645 aa10.09□□□□□ -0.79
USP16-206ENST00000485067 GIPC2Q8TF65 315 aa10.09□□□□□ -0.79
USP16-206ENST00000485067 MASTLQ96GX5 879 aa10.09□□□□□ -0.79
USP16-206ENST00000485067 DNAJC7Q99615 494 aa10.09□□□□□ -0.79
USP16-206ENST00000485067 CCDC68Q9H2F9 335 aa10.09□□□□□ -0.79
USP16-206ENST00000485067 RIC8AQ9NPQ8 531 aa10.09□□□□□ -0.79
USP16-206ENST00000485067 LZTFL1Q9NQ48 299 aa10.09□□□□□ -0.79
USP16-206ENST00000485067 HDAC6Q9UBN7 1215 aa10.09□□□□□ -0.79
USP16-206ENST00000485067 CAPN11Q9UMQ6 739 aa10.09□□□□□ -0.79
USP16-206ENST00000485067 WDR37Q9Y2I8 494 aa10.09□□□□□ -0.79
USP16-206ENST00000485067 LUC7L2Q9Y383 392 aaKnown RBP10.09□□□□□ -0.79
USP16-206ENST00000485067 CTAGE9A4FU28 777 aa10.08□□□□□ -0.8
USP16-206ENST00000485067 TRIM49BA6NDI0 452 aa10.08□□□□□ -0.8
USP16-206ENST00000485067 IVLP07476 585 aa10.08□□□□□ -0.8
USP16-206ENST00000485067 CLCN6P51797 869 aa10.08□□□□□ -0.8
USP16-206ENST00000485067 MRPL12P52815 198 aaKnown RBP10.08□□□□□ -0.8
USP16-206ENST00000485067 CSE1LP55060 971 aaKnown RBP10.08□□□□□ -0.8
USP16-206ENST00000485067 ERVK-24P63145 666 aa10.08□□□□□ -0.8
USP16-206ENST00000485067 ASIC1P78348 528 aa10.08□□□□□ -0.8
USP16-206ENST00000485067 ZNF543Q08ER8 600 aa10.08□□□□□ -0.8
USP16-206ENST00000485067 TTC39BQ5VTQ0 682 aaPredicted RBP10.08□□□□□ -0.8
USP16-206ENST00000485067 PPP4R3AQ6IN85 833 aa10.08□□□□□ -0.8
USP16-206ENST00000485067 POTEAQ6S8J7 498 aa10.08□□□□□ -0.8
USP16-206ENST00000485067 RSRC2Q7L4I2 434 aaKnown RBP10.08□□□□□ -0.8
USP16-206ENST00000485067 SH3TC2Q8TF17 1288 aa10.08□□□□□ -0.8
USP16-206ENST00000485067 LRRC15Q8TF66 581 aa10.08□□□□□ -0.8
USP16-206ENST00000485067 N4BP2L2Q92802 583 aaPredicted RBP10.08□□□□□ -0.8
USP16-206ENST00000485067 CCDC17Q96LX7 622 aa10.08□□□□□ -0.8
USP16-206ENST00000485067 PLIN2Q99541 437 aa10.08□□□□□ -0.8
USP16-206ENST00000485067 EHD4Q9H223 541 aa10.08□□□□□ -0.8
USP16-206ENST00000485067 DNAJC18Q9H819 358 aa10.08□□□□□ -0.8
USP16-206ENST00000485067 LRWD1Q9UFC0 647 aa10.08□□□□□ -0.8
USP16-206ENST00000485067 SLC26A4O43511 780 aa10.08□□□□□ -0.8
USP16-206ENST00000485067 RXRBP28702 533 aa10.08□□□□□ -0.8
USP16-206ENST00000485067 SHMT1P34896 483 aa10.08□□□□□ -0.8
USP16-206ENST00000485067 RFC5P40937 340 aa10.08□□□□□ -0.8
USP16-206ENST00000485067 MATR3P43243 847 aaKnown RBP eCLIP10.08□□□□□ -0.8
USP16-206ENST00000485067 USP11P51784 963 aa10.08□□□□□ -0.8
USP16-206ENST00000485067 PMS1P54277 932 aaKnown RBP10.08□□□□□ -0.8
USP16-206ENST00000485067 BIRC3Q13489 604 aa10.08□□□□□ -0.8
USP16-206ENST00000485067 AOC3Q16853 763 aa10.08□□□□□ -0.8
USP16-206ENST00000485067 FIGNQ5HY92 759 aa10.08□□□□□ -0.8
USP16-206ENST00000485067 ZNF772Q68DY9 489 aaPredicted RBP10.08□□□□□ -0.8
USP16-206ENST00000485067 TTBK2Q6IQ55 1244 aa10.08□□□□□ -0.8
USP16-206ENST00000485067 FOXR2Q6PJQ5 311 aa10.08□□□□□ -0.8
USP16-206ENST00000485067 LRRC31Q6UY01 552 aa10.08□□□□□ -0.8
USP16-206ENST00000485067 SLC7A5P1Q8MH63 180 aa10.08□□□□□ -0.8
USP16-206ENST00000485067 HPS3Q969F9 1004 aa10.08□□□□□ -0.8
USP16-206ENST00000485067 JAKMIP2Q96AA8 810 aa10.08□□□□□ -0.8
USP16-206ENST00000485067 TUBGCP2Q9BSJ2 902 aa10.08□□□□□ -0.8
USP16-206ENST00000485067 MRIQ9BWK5 157 aa10.08□□□□□ -0.8
USP16-206ENST00000485067 KIF9Q9HAQ2 790 aa10.08□□□□□ -0.8
USP16-206ENST00000485067 TMEM260Q9NX78 707 aa10.08□□□□□ -0.8
USP16-206ENST00000485067 RGL1Q9NZL6 768 aa10.08□□□□□ -0.8
USP16-206ENST00000485067 CDC23Q9UJX2 597 aa10.08□□□□□ -0.8
USP16-206ENST00000485067 FARP1Q9Y4F1 1045 aaPredicted RBP10.08□□□□□ -0.8
USP16-206ENST00000485067 ABCB11O95342 1321 aa10.07□□□□□ -0.8
USP16-206ENST00000485067 GRXCR2A6NFK2 248 aa10.07□□□□□ -0.8
USP16-206ENST00000485067 EIF3CLB5ME19 914 aaKnown RBP10.07□□□□□ -0.8
USP16-206ENST00000485067 G3V3G9 751 aa10.07□□□□□ -0.8
USP16-206ENST00000485067 POTEB2H3BUK9 544 aa10.07□□□□□ -0.8
USP16-206ENST00000485067 TXKP42681 527 aa10.07□□□□□ -0.8
USP16-206ENST00000485067 SMUG1Q53HV7 270 aa10.07□□□□□ -0.8
USP16-206ENST00000485067 ZNF569Q5MCW4 686 aa10.07□□□□□ -0.8
USP16-206ENST00000485067 UNC13DQ70J99 1090 aa10.07□□□□□ -0.8
USP16-206ENST00000485067 SRGAP1Q7Z6B7 1085 aa10.07□□□□□ -0.8
USP16-206ENST00000485067 KIAA1328Q86T90 577 aa10.07□□□□□ -0.8
USP16-206ENST00000485067 DCLK2Q8N568 766 aa10.07□□□□□ -0.8
USP16-206ENST00000485067 CUL5Q93034 780 aa10.07□□□□□ -0.8
USP16-206ENST00000485067 ZBTB10Q96DT7 871 aa10.07□□□□□ -0.8
USP16-206ENST00000485067 SPACA7Q96KW9 195 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms