RNA–Protein interactions for RNA: ENST00000484520.1

SPTA1-206, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 769 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-206ENST00000484520 OVOL3O00110 214 aa5.37□□□□□ -1.55
SPTA1-206ENST00000484520 CBFA2T2O43439 604 aa5.37□□□□□ -1.55
SPTA1-206ENST00000484520 PDIA4P13667 645 aaKnown RBP5.37□□□□□ -1.55
SPTA1-206ENST00000484520 GUCY2CP25092 1073 aa5.37□□□□□ -1.55
SPTA1-206ENST00000484520 RPL13P26373 211 aaKnown RBP5.37□□□□□ -1.55
SPTA1-206ENST00000484520 THBS2P35442 1172 aa5.37□□□□□ -1.55
SPTA1-206ENST00000484520 HMGA2P52926 109 aa5.37□□□□□ -1.55
SPTA1-206ENST00000484520 DCTN1Q14203 1278 aa5.37□□□□□ -1.55
SPTA1-206ENST00000484520 VPS72Q15906 364 aa5.37□□□□□ -1.55
SPTA1-206ENST00000484520 DPY19L1Q2PZI1 675 aa5.37□□□□□ -1.55
SPTA1-206ENST00000484520 FBXW10Q5XX13 1052 aa5.37□□□□□ -1.55
SPTA1-206ENST00000484520 WWC2Q6AWC2 1192 aa5.37□□□□□ -1.55
SPTA1-206ENST00000484520 MCTP2Q6DN12 878 aa5.37□□□□□ -1.55
SPTA1-206ENST00000484520 LIMS2Q7Z4I7 341 aa5.37□□□□□ -1.55
SPTA1-206ENST00000484520 SH3RF3Q8TEJ3 882 aaPredicted RBP5.37□□□□□ -1.55
SPTA1-206ENST00000484520 SSH1Q8WYL5 1049 aa5.37□□□□□ -1.55
SPTA1-206ENST00000484520 TEX13AQ9BXU3 409 aaPredicted RBP5.37□□□□□ -1.55
SPTA1-206ENST00000484520 SPATA31A1Q5TZJ5 1347 aa5.37□□□□□ -1.55
SPTA1-206ENST00000484520 SPATA31A5Q5VU36 1347 aa5.37□□□□□ -1.55
SPTA1-206ENST00000484520 SPATA31A7Q8IWB4 1347 aa5.37□□□□□ -1.55
SPTA1-206ENST00000484520 PLCH1Q4KWH8 1693 aa5.37□□□□□ -1.55
SPTA1-206ENST00000484520 ADAMTS7Q9UKP4 1686 aa5.37□□□□□ -1.55
SPTA1-206ENST00000484520 PKD1L3Q7Z443 1732 aa5.37□□□□□ -1.55
SPTA1-206ENST00000484520 NWD2Q9ULI1 1742 aa5.37□□□□□ -1.55
SPTA1-206ENST00000484520 MROH6A6NGR9 719 aa5.36□□□□□ -1.55
SPTA1-206ENST00000484520 EXOC5O00471 708 aa5.36□□□□□ -1.55
SPTA1-206ENST00000484520 BCAR3O75815 825 aa5.36□□□□□ -1.55
SPTA1-206ENST00000484520 DDX58O95786 925 aaKnown RBP5.36□□□□□ -1.55
SPTA1-206ENST00000484520 TACR2P21452 398 aa5.36□□□□□ -1.55
SPTA1-206ENST00000484520 SEPHS1P49903 392 aa5.36□□□□□ -1.55
SPTA1-206ENST00000484520 CCT4P50991 539 aaKnown RBP5.36□□□□□ -1.55
SPTA1-206ENST00000484520 EIF4A1P60842 406 aaKnown RBP5.36□□□□□ -1.55
SPTA1-206ENST00000484520 MVPQ14764 893 aaKnown RBP5.36□□□□□ -1.55
SPTA1-206ENST00000484520 ZNF790Q6PG37 636 aa5.36□□□□□ -1.55
SPTA1-206ENST00000484520 GLB1LQ6UWU2 654 aa5.36□□□□□ -1.55
SPTA1-206ENST00000484520 CENPQQ7L2Z9 268 aaPredicted RBP5.36□□□□□ -1.55
SPTA1-206ENST00000484520 STK32CQ86UX6 486 aa5.36□□□□□ -1.55
SPTA1-206ENST00000484520 Q8N1X5 172 aa5.36□□□□□ -1.55
SPTA1-206ENST00000484520 C8orf58Q8NAV2 365 aa5.36□□□□□ -1.55
SPTA1-206ENST00000484520 FRAT1Q92837 279 aaPredicted RBP5.36□□□□□ -1.55
SPTA1-206ENST00000484520 RNF34Q969K3 372 aa5.36□□□□□ -1.55
SPTA1-206ENST00000484520 WHRNQ9P202 907 aa5.36□□□□□ -1.55
SPTA1-206ENST00000484520 DBF4Q9UBU7 674 aaPredicted RBP5.36□□□□□ -1.55
SPTA1-206ENST00000484520 ABCC4O15439 1325 aa5.36□□□□□ -1.55
SPTA1-206ENST00000484520 KDM6AO15550 1401 aaPredicted RBP5.36□□□□□ -1.55
SPTA1-206ENST00000484520 PXDNLA1KZ92 1463 aa5.36□□□□□ -1.55
SPTA1-206ENST00000484520 BCL9O00512 1426 aa5.35□□□□□ -1.55
SPTA1-206ENST00000484520 HEG1Q9ULI3 1381 aa5.35□□□□□ -1.55
SPTA1-206ENST00000484520 LTBP3Q9NS15 1303 aa5.35□□□□□ -1.55
SPTA1-206ENST00000484520 C2orf71A6NGG8 1288 aa5.35□□□□□ -1.55
SPTA1-206ENST00000484520 CYP27B1O15528 508 aa5.35□□□□□ -1.55
SPTA1-206ENST00000484520 FUCA1P04066 466 aa5.35□□□□□ -1.55
SPTA1-206ENST00000484520 NTRK1P04629 796 aa5.35□□□□□ -1.55
SPTA1-206ENST00000484520 SNRPA1P09661 255 aaKnown RBP5.35□□□□□ -1.55
SPTA1-206ENST00000484520 TRIM27P14373 513 aa5.35□□□□□ -1.55
SPTA1-206ENST00000484520 ERCC3P19447 782 aa5.35□□□□□ -1.55
SPTA1-206ENST00000484520 GDF5P43026 501 aa5.35□□□□□ -1.55
SPTA1-206ENST00000484520 MRPL58Q14197 206 aaKnown RBP5.35□□□□□ -1.55
SPTA1-206ENST00000484520 DDB1Q16531 1140 aa5.35□□□□□ -1.55
SPTA1-206ENST00000484520 FAM26FQ5R3K3 315 aa5.35□□□□□ -1.55
SPTA1-206ENST00000484520 BORAQ6PGQ7 559 aa5.35□□□□□ -1.55
SPTA1-206ENST00000484520 FAM124AQ86V42 546 aa5.35□□□□□ -1.55
SPTA1-206ENST00000484520 FAM26EQ8N5C1 309 aa5.35□□□□□ -1.55
SPTA1-206ENST00000484520 KYQ8NBH2 561 aa5.35□□□□□ -1.55
SPTA1-206ENST00000484520 HAUS7Q99871 368 aa5.35□□□□□ -1.55
SPTA1-206ENST00000484520 MRIQ9BWK5 157 aa5.35□□□□□ -1.55
SPTA1-206ENST00000484520 HYPKQ9NX55 129 aa5.35□□□□□ -1.55
SPTA1-206ENST00000484520 TMOD3Q9NYL9 352 aa5.35□□□□□ -1.55
SPTA1-206ENST00000484520 NOB1Q9ULX3 412 aaKnown RBP5.35□□□□□ -1.55
SPTA1-206ENST00000484520 PPT2Q9UMR5 302 aa5.35□□□□□ -1.55
SPTA1-206ENST00000484520 BACE2Q9Y5Z0 518 aa5.35□□□□□ -1.55
SPTA1-206ENST00000484520 NPHP3-ACAD11A0A0J9YXS1 232 aa5.34□□□□□ -1.55
SPTA1-206ENST00000484520 C7orf72A4D263 438 aa5.34□□□□□ -1.55
SPTA1-206ENST00000484520 SLPIP03973 132 aa5.34□□□□□ -1.55
SPTA1-206ENST00000484520 PAMP19021 973 aa5.34□□□□□ -1.55
SPTA1-206ENST00000484520 C9orf131Q5VYM1 1079 aa5.34□□□□□ -1.55
SPTA1-206ENST00000484520 CD300LDQ6UXZ3 194 aa5.34□□□□□ -1.55
SPTA1-206ENST00000484520 ETV3LQ6ZN32 361 aa5.34□□□□□ -1.55
SPTA1-206ENST00000484520 ITPRIPQ8IWB1 547 aa5.34□□□□□ -1.55
SPTA1-206ENST00000484520 ZFPM1Q8IX07 1006 aa5.34□□□□□ -1.55
SPTA1-206ENST00000484520 TSPYL6Q8N831 410 aa5.34□□□□□ -1.55
SPTA1-206ENST00000484520 TXNDC5Q8NBS9 432 aaKnown RBP5.34□□□□□ -1.55
SPTA1-206ENST00000484520 RBBP8NLQ8NC74 664 aaPredicted RBP5.34□□□□□ -1.55
SPTA1-206ENST00000484520 CRBNQ96SW2 442 aa5.34□□□□□ -1.55
SPTA1-206ENST00000484520 RWDD1Q9H446 243 aaPredicted RBP5.34□□□□□ -1.55
SPTA1-206ENST00000484520 PCDH18Q9HCL0 1135 aa5.34□□□□□ -1.55
SPTA1-206ENST00000484520 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.34□□□□□ -1.55
SPTA1-206ENST00000484520 BCL9LQ86UU0 1499 aa5.33□□□□□ -1.56
SPTA1-206ENST00000484520 ATRNO75882 1429 aa5.33□□□□□ -1.56
SPTA1-206ENST00000484520 DDX3XO00571 662 aaKnown RBP eCLIP5.33□□□□□ -1.56
SPTA1-206ENST00000484520 PLIN1O60240 522 aa5.33□□□□□ -1.56
SPTA1-206ENST00000484520 NPHS1O60500 1241 aa5.33□□□□□ -1.56
SPTA1-206ENST00000484520 EIF5BO60841 1220 aaKnown RBP5.33□□□□□ -1.56
SPTA1-206ENST00000484520 STARD3NLO95772 234 aa5.33□□□□□ -1.56
SPTA1-206ENST00000484520 GNAI3P08754 354 aa5.33□□□□□ -1.56
SPTA1-206ENST00000484520 KRTAP1-1Q07627 177 aa5.33□□□□□ -1.56
SPTA1-206ENST00000484520 HDAC1Q13547 482 aaPredicted RBP5.33□□□□□ -1.56
SPTA1-206ENST00000484520 CDSNQ15517 529 aa5.33□□□□□ -1.56
SPTA1-206ENST00000484520 GNPTABQ3T906 1256 aa5.33□□□□□ -1.56
SPTA1-206ENST00000484520 HEATR6Q6AI08 1181 aaKnown RBP5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms