RNA–Protein interactions for RNA: ENST00000484178.5

SSBP1-211, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SSBP1, Length 676 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-211ENST00000484178 MARCH2Q9P0N8 246 aa5.78□□□□□ -1.48
SSBP1-211ENST00000484178 CLEC1BQ9P126 229 aa5.78□□□□□ -1.48
SSBP1-211ENST00000484178 PRKAG3Q9UGI9 489 aa5.78□□□□□ -1.48
SSBP1-211ENST00000484178 MSRB2Q9Y3D2 182 aa5.78□□□□□ -1.48
SSBP1-211ENST00000484178 PPRC1Q5VV67 1664 aaKnown RBP5.78□□□□□ -1.48
SSBP1-211ENST00000484178 PIK3R4Q99570 1358 aa5.78□□□□□ -1.48
SSBP1-211ENST00000484178 MROH1Q8NDA8 1641 aa5.77□□□□□ -1.48
SSBP1-211ENST00000484178 HECW2Q9P2P5 1572 aa5.77□□□□□ -1.49
SSBP1-211ENST00000484178 NOS1P29475 1434 aa5.77□□□□□ -1.49
SSBP1-211ENST00000484178 CDC45O75419 566 aa5.77□□□□□ -1.49
SSBP1-211ENST00000484178 MCM5P33992 734 aa5.77□□□□□ -1.49
SSBP1-211ENST00000484178 MTHFSP49914 203 aa5.77□□□□□ -1.49
SSBP1-211ENST00000484178 NUCB2P80303 420 aa5.77□□□□□ -1.49
SSBP1-211ENST00000484178 NUCB1Q02818 461 aa5.77□□□□□ -1.49
SSBP1-211ENST00000484178 CCDC173Q0VFZ6 552 aa5.77□□□□□ -1.49
SSBP1-211ENST00000484178 SCRN1Q12765 414 aa5.77□□□□□ -1.49
SSBP1-211ENST00000484178 PLEKHG6Q3KR16 790 aa5.77□□□□□ -1.49
SSBP1-211ENST00000484178 E4F1Q66K89 784 aaPredicted RBP5.77□□□□□ -1.49
SSBP1-211ENST00000484178 MCTP2Q6DN12 878 aa5.77□□□□□ -1.49
SSBP1-211ENST00000484178 CASC1Q6TDU7 716 aa5.77□□□□□ -1.49
SSBP1-211ENST00000484178 GLB1LQ6UWU2 654 aa5.77□□□□□ -1.49
SSBP1-211ENST00000484178 CD300LDQ6UXZ3 194 aa5.77□□□□□ -1.49
SSBP1-211ENST00000484178 FAM26EQ8N5C1 309 aa5.77□□□□□ -1.49
SSBP1-211ENST00000484178 SH3TC2Q8TF17 1288 aa5.77□□□□□ -1.49
SSBP1-211ENST00000484178 SMC4Q9NTJ3 1288 aa5.77□□□□□ -1.49
SSBP1-211ENST00000484178 FANCLQ9NW38 375 aa5.77□□□□□ -1.49
SSBP1-211ENST00000484178 APEX2Q9UBZ4 518 aa5.77□□□□□ -1.49
SSBP1-211ENST00000484178 SRRDQ9UH36 339 aa5.77□□□□□ -1.49
SSBP1-211ENST00000484178 TSC22D4Q9Y3Q8 395 aa5.77□□□□□ -1.49
SSBP1-211ENST00000484178 X6R8D5 127 aa5.77□□□□□ -1.49
SSBP1-211ENST00000484178 PNPLA6Q8IY17 1366 aa5.77□□□□□ -1.49
SSBP1-211ENST00000484178 ADGRF5Q8IZF2 1346 aa5.76□□□□□ -1.49
SSBP1-211ENST00000484178 CDC42BPGQ6DT37 1551 aa5.76□□□□□ -1.49
SSBP1-211ENST00000484178 SHPRHQ149N8 1683 aa5.76□□□□□ -1.49
SSBP1-211ENST00000484178 ZC3H13Q5T200 1668 aaKnown RBP5.76□□□□□ -1.49
SSBP1-211ENST00000484178 C22orf46C9J442 243 aa5.76□□□□□ -1.49
SSBP1-211ENST00000484178 PPP1R12AO14974 1030 aaPredicted RBP5.76□□□□□ -1.49
SSBP1-211ENST00000484178 EPB41L2O43491 1005 aaKnown RBP5.76□□□□□ -1.49
SSBP1-211ENST00000484178 KCNH1O95259 989 aa5.76□□□□□ -1.49
SSBP1-211ENST00000484178 THBDP07204 575 aa5.76□□□□□ -1.49
SSBP1-211ENST00000484178 U2AF1L5P0DN76 240 aaPredicted RBP5.76□□□□□ -1.49
SSBP1-211ENST00000484178 NAT2P11245 290 aa5.76□□□□□ -1.49
SSBP1-211ENST00000484178 ZNF28P17035 718 aa5.76□□□□□ -1.49
SSBP1-211ENST00000484178 DDIT3P35638 169 aa5.76□□□□□ -1.49
SSBP1-211ENST00000484178 GTF2A2P52657 109 aa5.76□□□□□ -1.49
SSBP1-211ENST00000484178 U2AF1Q01081 240 aaKnown RBP eCLIP5.76□□□□□ -1.491e-7■■■■■ 28.2
SSBP1-211ENST00000484178 TESK1Q15569 626 aa5.76□□□□□ -1.49
SSBP1-211ENST00000484178 INF2Q27J81 1249 aa5.76□□□□□ -1.49
SSBP1-211ENST00000484178 CR1LQ2VPA4 569 aa5.76□□□□□ -1.49
SSBP1-211ENST00000484178 KIAA1211LQ6NV74 962 aa5.76□□□□□ -1.49
SSBP1-211ENST00000484178 VHLLQ6RSH7 139 aa5.76□□□□□ -1.49
SSBP1-211ENST00000484178 HDGFL2Q7Z4V5 671 aaPredicted RBP5.76□□□□□ -1.49
SSBP1-211ENST00000484178 PLEKHH3Q7Z736 793 aa5.76□□□□□ -1.49
SSBP1-211ENST00000484178 KIAA0907Q7Z7F0 614 aaPredicted RBP5.76□□□□□ -1.49
SSBP1-211ENST00000484178 TRIM59Q8IWR1 403 aa5.76□□□□□ -1.49
SSBP1-211ENST00000484178 SLC16A11Q8NCK7 471 aa5.76□□□□□ -1.49
SSBP1-211ENST00000484178 CHST13Q8NET6 341 aa5.76□□□□□ -1.49
SSBP1-211ENST00000484178 NPLOC4Q8TAT6 608 aa5.76□□□□□ -1.49
SSBP1-211ENST00000484178 MRGPRX3Q96LB0 322 aa5.76□□□□□ -1.49
SSBP1-211ENST00000484178 SORCS2Q96PQ0 1159 aa5.76□□□□□ -1.49
SSBP1-211ENST00000484178 APBA2Q99767 749 aa5.76□□□□□ -1.49
SSBP1-211ENST00000484178 SYT3Q9BQG1 590 aa5.76□□□□□ -1.49
SSBP1-211ENST00000484178 API5Q9BZZ5 524 aaKnown RBP5.76□□□□□ -1.49
SSBP1-211ENST00000484178 CCDC113Q9H0I3 377 aa5.76□□□□□ -1.49
SSBP1-211ENST00000484178 SLKQ9H2G2 1235 aaPredicted RBP5.76□□□□□ -1.49
SSBP1-211ENST00000484178 NKX2-4Q9H2Z4 354 aa5.76□□□□□ -1.49
SSBP1-211ENST00000484178 KANSL2Q9H9L4 492 aa5.76□□□□□ -1.49
SSBP1-211ENST00000484178 GPRC5CQ9NQ84 441 aa5.76□□□□□ -1.49
SSBP1-211ENST00000484178 ZBTB40Q9NUA8 1239 aa5.76□□□□□ -1.49
SSBP1-211ENST00000484178 DDX56Q9NY93 547 aaKnown RBP5.76□□□□□ -1.49
SSBP1-211ENST00000484178 CHD1O14646 1710 aa5.76□□□□□ -1.49
SSBP1-211ENST00000484178 FRMPD1Q5SYB0 1578 aa5.76□□□□□ -1.49
SSBP1-211ENST00000484178 UGGT1Q9NYU2 1555 aa5.76□□□□□ -1.49
SSBP1-211ENST00000484178 ABCC3O15438 1527 aa5.75□□□□□ -1.49
SSBP1-211ENST00000484178 DDX3XO00571 662 aaKnown RBP eCLIP5.75□□□□□ -1.491e-34■□□□□ 9.1
SSBP1-211ENST00000484178 LAMTOR5O43504 91 aa5.75□□□□□ -1.49
SSBP1-211ENST00000484178 B4GALT3O60512 393 aa5.75□□□□□ -1.49
SSBP1-211ENST00000484178 HSP90AA1P07900 732 aaKnown RBP5.75□□□□□ -1.49
SSBP1-211ENST00000484178 HSP90AB1P08238 724 aaKnown RBP5.75□□□□□ -1.49
SSBP1-211ENST00000484178 XRCC6P12956 609 aaKnown RBP eCLIP5.75□□□□□ -1.49
SSBP1-211ENST00000484178 TMPOP42166 694 aaKnown RBP5.75□□□□□ -1.49
SSBP1-211ENST00000484178 MCM2P49736 904 aa5.75□□□□□ -1.49
SSBP1-211ENST00000484178 GNAI1P63096 354 aa5.75□□□□□ -1.49
SSBP1-211ENST00000484178 AMPD3Q01432 767 aa5.75□□□□□ -1.49
SSBP1-211ENST00000484178 CYP4F3Q08477 520 aa5.75□□□□□ -1.49
SSBP1-211ENST00000484178 ADAM9Q13443 819 aa5.75□□□□□ -1.49
SSBP1-211ENST00000484178 RABEP1Q15276 862 aa5.75□□□□□ -1.49
SSBP1-211ENST00000484178 PKN3Q6P5Z2 889 aa5.75□□□□□ -1.49
SSBP1-211ENST00000484178 MILR1Q7Z6M3 343 aa5.75□□□□□ -1.49
SSBP1-211ENST00000484178 TEX2Q8IWB9 1127 aa5.75□□□□□ -1.49
SSBP1-211ENST00000484178 AFAP1Q8N556 730 aa5.75□□□□□ -1.49
SSBP1-211ENST00000484178 DNERQ8NFT8 737 aa5.75□□□□□ -1.49
SSBP1-211ENST00000484178 FRS2Q8WU20 508 aa5.75□□□□□ -1.49
SSBP1-211ENST00000484178 CPLX3Q8WVH0 158 aa5.75□□□□□ -1.49
SSBP1-211ENST00000484178 STAG1Q8WVM7 1258 aa5.75□□□□□ -1.49
SSBP1-211ENST00000484178 APPBP2Q92624 585 aa5.75□□□□□ -1.49
SSBP1-211ENST00000484178 ANAPC16Q96DE5 110 aa5.75□□□□□ -1.49
SSBP1-211ENST00000484178 GRPEL1Q9HAV7 217 aa5.75□□□□□ -1.49
SSBP1-211ENST00000484178 POGKQ9P215 609 aa5.75□□□□□ -1.49
SSBP1-211ENST00000484178 CHPF2Q9P2E5 772 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms