RNA–Protein interactions for RNA: ENST00000483888.6

COL12A1-207, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL12A1, Length 9,637 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-207ENST00000483888 RFX6Q8HWS3 928 aa10.95□□□□□ -0.66
COL12A1-207ENST00000483888 LRRC39Q96DD0 335 aa10.95□□□□□ -0.66
COL12A1-207ENST00000483888 QKIQ96PU8 341 aaKnown RBP eCLIP10.95□□□□□ -0.66
COL12A1-207ENST00000483888 PAIP1Q9H074 479 aaKnown RBP10.95□□□□□ -0.66
COL12A1-207ENST00000483888 NOL6Q9H6R4 1146 aaKnown RBP10.95□□□□□ -0.66
COL12A1-207ENST00000483888 ARPP21Q9UBL0 812 aaPredicted RBP10.95□□□□□ -0.66
COL12A1-207ENST00000483888 DIS3Q9Y2L1 958 aaKnown RBP10.95□□□□□ -0.66
COL12A1-207ENST00000483888 C4BPBP20851 252 aa10.94□□□□□ -0.66
COL12A1-207ENST00000483888 IL12RB1P42701 662 aa10.94□□□□□ -0.66
COL12A1-207ENST00000483888 LRRC59Q96AG4 307 aaKnown RBP10.94□□□□□ -0.66
COL12A1-207ENST00000483888 GINS4Q9BRT9 223 aa10.94□□□□□ -0.66
COL12A1-207ENST00000483888 LRRC1Q9BTT6 524 aa10.94□□□□□ -0.66
COL12A1-207ENST00000483888 EDEM3Q9BZQ6 932 aa10.94□□□□□ -0.66
COL12A1-207ENST00000483888 KLHL31Q9H511 634 aa10.94□□□□□ -0.66
COL12A1-207ENST00000483888 KDM3AQ9Y4C1 1321 aa10.94□□□□□ -0.66
COL12A1-207ENST00000483888 KAT6AQ92794 2004 aa10.94□□□□□ -0.66
COL12A1-207ENST00000483888 PIK3C2GO75747 1445 aa10.94□□□□□ -0.66
COL12A1-207ENST00000483888 CFAP99D6REC4 459 aa10.94□□□□□ -0.66
COL12A1-207ENST00000483888 HMOX2P30519 316 aa10.94□□□□□ -0.66
COL12A1-207ENST00000483888 CCDC142Q17RM4 750 aa10.94□□□□□ -0.66
COL12A1-207ENST00000483888 RSBN1Q5VWQ0 802 aaPredicted RBP10.94□□□□□ -0.66
COL12A1-207ENST00000483888 LRIG3Q6UXM1 1119 aa10.94□□□□□ -0.66
COL12A1-207ENST00000483888 TSHZ1Q6ZSZ6 1077 aa10.94□□□□□ -0.66
COL12A1-207ENST00000483888 KRT73Q86Y46 540 aa10.94□□□□□ -0.66
COL12A1-207ENST00000483888 GRAMD1CQ8IYS0 662 aa10.94□□□□□ -0.66
COL12A1-207ENST00000483888 PCDHGA3Q9Y5H0 932 aa10.94□□□□□ -0.66
COL12A1-207ENST00000483888 THOC2Q8NI27 1593 aaKnown RBP10.94□□□□□ -0.66
COL12A1-207ENST00000483888 hCG_1642624A0A1W2PR95 340 aa10.94□□□□□ -0.66
COL12A1-207ENST00000483888 GSTT1P30711 240 aa10.94□□□□□ -0.66
COL12A1-207ENST00000483888 HSPA13P48723 471 aa10.94□□□□□ -0.66
COL12A1-207ENST00000483888 NUP107P57740 925 aa10.94□□□□□ -0.66
COL12A1-207ENST00000483888 CUL4AQ13619 759 aa10.94□□□□□ -0.66
COL12A1-207ENST00000483888 PRKG1Q13976 671 aa10.94□□□□□ -0.66
COL12A1-207ENST00000483888 AGBL2Q5U5Z8 902 aa10.94□□□□□ -0.66
COL12A1-207ENST00000483888 TTC33Q6PID6 262 aaPredicted RBP10.94□□□□□ -0.66
COL12A1-207ENST00000483888 XPO6Q96QU8 1125 aaKnown RBP10.94□□□□□ -0.66
COL12A1-207ENST00000483888 ZMYM6O95789 1325 aa10.94□□□□□ -0.66
COL12A1-207ENST00000483888 VIL1P09327 827 aaKnown RBP10.94□□□□□ -0.66
COL12A1-207ENST00000483888 PLOD1Q02809 727 aaPredicted RBP10.94□□□□□ -0.66
COL12A1-207ENST00000483888 BYSLQ13895 437 aaKnown RBP10.94□□□□□ -0.66
COL12A1-207ENST00000483888 POTEAQ6S8J7 498 aa10.94□□□□□ -0.66
COL12A1-207ENST00000483888 ANKRD13DQ6ZTN6 518 aa10.94□□□□□ -0.66
COL12A1-207ENST00000483888 DHTKD1Q96HY7 919 aaPredicted RBP10.94□□□□□ -0.66
COL12A1-207ENST00000483888 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.94□□□□□ -0.66
COL12A1-207ENST00000483888 CD19P15391 556 aa10.94□□□□□ -0.66
COL12A1-207ENST00000483888 ADAM9Q13443 819 aa10.94□□□□□ -0.66
COL12A1-207ENST00000483888 SPATA4Q8NEY3 305 aa10.94□□□□□ -0.66
COL12A1-207ENST00000483888 PIGOQ8TEQ8 1089 aa10.94□□□□□ -0.66
COL12A1-207ENST00000483888 TRAPPC9Q96Q05 1148 aa10.94□□□□□ -0.66
COL12A1-207ENST00000483888 F8VZ95 297 aa10.94□□□□□ -0.66
COL12A1-207ENST00000483888 ZNF185O15231 689 aa10.94□□□□□ -0.66
COL12A1-207ENST00000483888 AKAP10O43572 662 aa10.94□□□□□ -0.66
COL12A1-207ENST00000483888 KPNA2P52292 529 aaKnown RBP10.94□□□□□ -0.66
COL12A1-207ENST00000483888 C21orf59P57076 290 aa10.94□□□□□ -0.66
COL12A1-207ENST00000483888 ARPC4P59998 168 aa10.94□□□□□ -0.66
COL12A1-207ENST00000483888 CAV1Q03135 178 aa10.94□□□□□ -0.66
COL12A1-207ENST00000483888 PPIDQ08752 370 aaKnown RBP10.94□□□□□ -0.66
COL12A1-207ENST00000483888 PREPLQ4J6C6 727 aaPredicted RBP10.94□□□□□ -0.66
COL12A1-207ENST00000483888 ARMC3Q5W041 872 aa10.94□□□□□ -0.66
COL12A1-207ENST00000483888 LPCAT2Q7L5N7 544 aa10.94□□□□□ -0.66
COL12A1-207ENST00000483888 TAS2R42Q7RTR8 314 aa10.94□□□□□ -0.66
COL12A1-207ENST00000483888 GPBP1Q86WP2 473 aa10.94□□□□□ -0.66
COL12A1-207ENST00000483888 BBS2Q9BXC9 721 aa10.94□□□□□ -0.66
COL12A1-207ENST00000483888 ORC4O43929 436 aa10.94□□□□□ -0.66
COL12A1-207ENST00000483888 KRT37O76014 449 aa10.94□□□□□ -0.66
COL12A1-207ENST00000483888 RAPGEF3O95398 923 aa10.94□□□□□ -0.66
COL12A1-207ENST00000483888 MAN2A1Q16706 1144 aa10.94□□□□□ -0.66
COL12A1-207ENST00000483888 TJAP1Q5JTD0 557 aa10.94□□□□□ -0.66
COL12A1-207ENST00000483888 RBBP8NLQ8NC74 664 aaPredicted RBP10.94□□□□□ -0.66
COL12A1-207ENST00000483888 DCLRE1BQ9H816 532 aa10.94□□□□□ -0.66
COL12A1-207ENST00000483888 MID2Q9UJV3 735 aa10.94□□□□□ -0.66
COL12A1-207ENST00000483888 UHRF1BP1Q6BDS2 1440 aa10.94□□□□□ -0.66
COL12A1-207ENST00000483888 PITPNM2Q9BZ72 1349 aa10.93□□□□□ -0.66
COL12A1-207ENST00000483888 SEMA3DO95025 777 aa10.93□□□□□ -0.66
COL12A1-207ENST00000483888 PYGLP06737 847 aa10.93□□□□□ -0.66
COL12A1-207ENST00000483888 PTH1RQ03431 593 aa10.93□□□□□ -0.66
COL12A1-207ENST00000483888 RABGEF1Q9UJ41 708 aa10.93□□□□□ -0.66
COL12A1-207ENST00000483888 KLHL20Q9Y2M5 609 aa10.93□□□□□ -0.66
COL12A1-207ENST00000483888 ADCY9O60503 1353 aa10.93□□□□□ -0.66
COL12A1-207ENST00000483888 TBC1D10BQ4KMP7 808 aaPredicted RBP10.93□□□□□ -0.66
COL12A1-207ENST00000483888 MYCBPAPQ8TBZ2 947 aa10.93□□□□□ -0.66
COL12A1-207ENST00000483888 MTERF3Q96E29 417 aa10.93□□□□□ -0.66
COL12A1-207ENST00000483888 TMEM245Q9H330 911 aa10.93□□□□□ -0.66
COL12A1-207ENST00000483888 SUGCTQ9HAC7 445 aa10.93□□□□□ -0.66
COL12A1-207ENST00000483888 HERC5Q9UII4 1024 aaKnown RBP10.93□□□□□ -0.66
COL12A1-207ENST00000483888 KDM5AP29375 1690 aaKnown RBP10.93□□□□□ -0.66
COL12A1-207ENST00000483888 FGFR4P22455 802 aa10.93□□□□□ -0.66
COL12A1-207ENST00000483888 DMC1Q14565 340 aa10.93□□□□□ -0.66
COL12A1-207ENST00000483888 SH3GLB1Q9Y371 365 aa10.93□□□□□ -0.66
COL12A1-207ENST00000483888 UBE4BO95155 1302 aa10.93□□□□□ -0.66
COL12A1-207ENST00000483888 CSRNP1Q96S65 589 aa10.93□□□□□ -0.66
COL12A1-207ENST00000483888 MAP3K19Q56UN5 1328 aa10.93□□□□□ -0.66
COL12A1-207ENST00000483888 ATF3P18847 181 aa10.93□□□□□ -0.66
COL12A1-207ENST00000483888 TECP42680 631 aa10.93□□□□□ -0.66
COL12A1-207ENST00000483888 DYNLT1P63172 113 aa10.93□□□□□ -0.66
COL12A1-207ENST00000483888 CAPRIN1Q14444 709 aaKnown RBP10.93□□□□□ -0.66
COL12A1-207ENST00000483888 SLC39A14Q15043 492 aa10.93□□□□□ -0.66
COL12A1-207ENST00000483888 HABP4Q5JVS0 413 aaKnown RBP10.93□□□□□ -0.66
COL12A1-207ENST00000483888 TMEM110Q86TL2 294 aa10.93□□□□□ -0.66
COL12A1-207ENST00000483888 MLXIPQ9HAP2 919 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms