RNA–Protein interactions for RNA: ENST00000483326.1

LTN1-205, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene LTN1, Length 1,753 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-205ENST00000483326 SLC12A5Q9H2X9 1139 aa4.78□□□□□ -1.64
LTN1-205ENST00000483326 FAM53CQ9NYF3 392 aa4.78□□□□□ -1.64
LTN1-205ENST00000483326 JRKLQ9Y4A0 524 aa4.78□□□□□ -1.64
LTN1-205ENST00000483326 PITPNM2Q9BZ72 1349 aa4.78□□□□□ -1.64
LTN1-205ENST00000483326 RAPGEF2Q9Y4G8 1499 aa4.78□□□□□ -1.64
LTN1-205ENST00000483326 KLHL33A6NCF5 533 aa4.78□□□□□ -1.64
LTN1-205ENST00000483326 TLR5O60602 858 aa4.78□□□□□ -1.64
LTN1-205ENST00000483326 SNX2O60749 519 aa4.78□□□□□ -1.64
LTN1-205ENST00000483326 GAS7O60861 476 aa4.78□□□□□ -1.64
LTN1-205ENST00000483326 DNAJA2O60884 412 aa4.78□□□□□ -1.64
LTN1-205ENST00000483326 REC8O95072 547 aa4.78□□□□□ -1.64
LTN1-205ENST00000483326 CST3P01034 146 aaPredicted RBP4.78□□□□□ -1.64
LTN1-205ENST00000483326 RAG1P15918 1043 aa4.78□□□□□ -1.64
LTN1-205ENST00000483326 TNFAIP3P21580 790 aa4.78□□□□□ -1.64
LTN1-205ENST00000483326 RRM1P23921 792 aa4.78□□□□□ -1.64
LTN1-205ENST00000483326 USP8P40818 1118 aa4.78□□□□□ -1.64
LTN1-205ENST00000483326 GRK6P43250 576 aa4.78□□□□□ -1.64
LTN1-205ENST00000483326 LSSP48449 732 aa4.78□□□□□ -1.64
LTN1-205ENST00000483326 IFIT1BQ5T764 474 aaKnown RBP4.78□□□□□ -1.64
LTN1-205ENST00000483326 ZKSCAN2Q63HK3 967 aa4.78□□□□□ -1.64
LTN1-205ENST00000483326 MZT2BQ6NZ67 158 aa4.78□□□□□ -1.64
LTN1-205ENST00000483326 PDXDC1Q6P996 788 aa4.78□□□□□ -1.64
LTN1-205ENST00000483326 PGM2L1Q6PCE3 622 aa4.78□□□□□ -1.64
LTN1-205ENST00000483326 B3GNT9Q6UX72 402 aa4.78□□□□□ -1.64
LTN1-205ENST00000483326 LDHAL6AQ6ZMR3 332 aa4.78□□□□□ -1.64
LTN1-205ENST00000483326 EP400NLQ6ZTU2 488 aa4.78□□□□□ -1.64
LTN1-205ENST00000483326 DDX53Q86TM3 631 aaKnown RBP4.78□□□□□ -1.64
LTN1-205ENST00000483326 C11orf74Q86VG3 221 aa4.78□□□□□ -1.64
LTN1-205ENST00000483326 MFSD4AQ8N468 514 aa4.78□□□□□ -1.64
LTN1-205ENST00000483326 NAXEQ8NCW5 288 aa4.78□□□□□ -1.64
LTN1-205ENST00000483326 ANKRD20A12PQ8NF67 263 aa4.78□□□□□ -1.64
LTN1-205ENST00000483326 EXOC6Q8TAG9 804 aa4.78□□□□□ -1.64
LTN1-205ENST00000483326 XAGE3Q8WTP9 111 aa4.78□□□□□ -1.64
LTN1-205ENST00000483326 ERCC4Q92889 916 aaPredicted RBP4.78□□□□□ -1.64
LTN1-205ENST00000483326 SMARCC1Q92922 1105 aaPredicted RBP4.78□□□□□ -1.64
LTN1-205ENST00000483326 PGBD4Q96DM1 585 aa4.78□□□□□ -1.64
LTN1-205ENST00000483326 SGCZQ96LD1 299 aa4.78□□□□□ -1.64
LTN1-205ENST00000483326 CCDC138Q96M89 665 aa4.78□□□□□ -1.64
LTN1-205ENST00000483326 SERINC2Q96SA4 455 aa4.78□□□□□ -1.64
LTN1-205ENST00000483326 FAM204AQ9H8W3 233 aa4.78□□□□□ -1.64
LTN1-205ENST00000483326 RASSF1Q9NS23 344 aa4.78□□□□□ -1.64
LTN1-205ENST00000483326 MKS1Q9NXB0 559 aa4.78□□□□□ -1.64
LTN1-205ENST00000483326 PAXBP1Q9Y5B6 917 aa4.78□□□□□ -1.64
LTN1-205ENST00000483326 BICDL2A1A5D9 508 aa4.77□□□□□ -1.65
LTN1-205ENST00000483326 ZNF891A8MT65 544 aaPredicted RBP4.77□□□□□ -1.65
LTN1-205ENST00000483326 J3KRW8 73 aa4.77□□□□□ -1.65
LTN1-205ENST00000483326 TPP1O14773 563 aa4.77□□□□□ -1.65
LTN1-205ENST00000483326 ORC4O43929 436 aa4.77□□□□□ -1.65
LTN1-205ENST00000483326 ZBED1O96006 694 aa4.77□□□□□ -1.65
LTN1-205ENST00000483326 HRGP04196 525 aa4.77□□□□□ -1.65
LTN1-205ENST00000483326 ZNF865P0CJ78 1059 aaPredicted RBP4.77□□□□□ -1.65
LTN1-205ENST00000483326 SLC5A1P13866 664 aa4.77□□□□□ -1.65
LTN1-205ENST00000483326 AKAP5P24588 427 aa4.77□□□□□ -1.65
LTN1-205ENST00000483326 MAP2K2P36507 400 aa4.77□□□□□ -1.65
LTN1-205ENST00000483326 AFMP43652 599 aa4.77□□□□□ -1.65
LTN1-205ENST00000483326 SESN3P58005 492 aa4.77□□□□□ -1.65
LTN1-205ENST00000483326 DSG1Q02413 1049 aa4.77□□□□□ -1.65
LTN1-205ENST00000483326 NUCB1Q02818 461 aa4.77□□□□□ -1.65
LTN1-205ENST00000483326 TRIM14Q14142 442 aa4.77□□□□□ -1.65
LTN1-205ENST00000483326 PKN1Q16512 942 aa4.77□□□□□ -1.65
LTN1-205ENST00000483326 ALDH1L2Q3SY69 923 aa4.77□□□□□ -1.65
LTN1-205ENST00000483326 RRP12Q5JTH9 1297 aaKnown RBP4.77□□□□□ -1.65
LTN1-205ENST00000483326 LETMD1Q6P1Q0 360 aa4.77□□□□□ -1.65
LTN1-205ENST00000483326 ANKRD23Q86SG2 305 aa4.77□□□□□ -1.65
LTN1-205ENST00000483326 SKAP1Q86WV1 359 aa4.77□□□□□ -1.65
LTN1-205ENST00000483326 GIMAP8Q8ND71 665 aaPredicted RBP4.77□□□□□ -1.65
LTN1-205ENST00000483326 TBC1D22AQ8WUA7 517 aa4.77□□□□□ -1.65
LTN1-205ENST00000483326 CCDC120Q96HB5 630 aa4.77□□□□□ -1.65
LTN1-205ENST00000483326 PPM1MQ96MI6 270 aa4.77□□□□□ -1.65
LTN1-205ENST00000483326 TAAR9Q96RI9 348 aa4.77□□□□□ -1.65
LTN1-205ENST00000483326 DPH2Q9BQC3 489 aaPredicted RBP4.77□□□□□ -1.65
LTN1-205ENST00000483326 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.77□□□□□ -1.651e-6■■□□□ 12.5
LTN1-205ENST00000483326 RNF38Q9H0F5 515 aa4.77□□□□□ -1.65
LTN1-205ENST00000483326 KLHL25Q9H0H3 589 aa4.77□□□□□ -1.65
LTN1-205ENST00000483326 EMC7Q9NPA0 242 aa4.77□□□□□ -1.65
LTN1-205ENST00000483326 SAMD15Q9P1V8 674 aa4.77□□□□□ -1.65
LTN1-205ENST00000483326 APEX2Q9UBZ4 518 aa4.77□□□□□ -1.65
LTN1-205ENST00000483326 KLHL3Q9UH77 587 aa4.77□□□□□ -1.65
LTN1-205ENST00000483326 DNM3Q9UQ16 869 aa4.77□□□□□ -1.65
LTN1-205ENST00000483326 PCDHGB3Q9Y5G1 929 aa4.77□□□□□ -1.65
LTN1-205ENST00000483326 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.76□□□□□ -1.65
LTN1-205ENST00000483326 hCG_1984214I3L0E3 225 aa4.76□□□□□ -1.65
LTN1-205ENST00000483326 CBX4O00257 560 aa4.76□□□□□ -1.65
LTN1-205ENST00000483326 NOP56O00567 594 aaKnown RBP4.76□□□□□ -1.65
LTN1-205ENST00000483326 CCP110O43303 1012 aa4.76□□□□□ -1.65
LTN1-205ENST00000483326 HTATSF1O43719 755 aaKnown RBP4.76□□□□□ -1.65
LTN1-205ENST00000483326 AP1G1O43747 822 aa4.76□□□□□ -1.65
LTN1-205ENST00000483326 DLX3O60479 287 aa4.76□□□□□ -1.65
LTN1-205ENST00000483326 NAT1P18440 290 aa4.76□□□□□ -1.65
LTN1-205ENST00000483326 PTPRGP23470 1445 aa4.76□□□□□ -1.65
LTN1-205ENST00000483326 MAPK9P45984 424 aa4.76□□□□□ -1.65
LTN1-205ENST00000483326 RXRGP48443 463 aa4.76□□□□□ -1.65
LTN1-205ENST00000483326 GSCP56915 257 aaPredicted RBP4.76□□□□□ -1.65
LTN1-205ENST00000483326 ODF1Q14990 250 aa4.76□□□□□ -1.65
LTN1-205ENST00000483326 KCNMB1Q16558 191 aa4.76□□□□□ -1.65
LTN1-205ENST00000483326 NKG7Q16617 165 aa4.76□□□□□ -1.65
LTN1-205ENST00000483326 MUM1L1Q5H9M0 696 aa4.76□□□□□ -1.65
LTN1-205ENST00000483326 ZSWIM9Q86XI8 627 aa4.76□□□□□ -1.65
LTN1-205ENST00000483326 KSR1Q8IVT5 923 aa4.76□□□□□ -1.65
LTN1-205ENST00000483326 CRACR2BQ8N4Y2 399 aaPredicted RBP4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms