RNA–Protein interactions for RNA: ENST00000482871.5

MSL3-215, Transcript of MSL complex subunit 3, humanhuman

TSL 3

Gene MSL3, Length 834 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-215ENST00000482871 ATRNL1Q5VV63 1379 aa9.1□□□□□ -0.95
MSL3-215ENST00000482871 COL2A1P02458 1487 aaPredicted RBP9.09□□□□□ -0.95
MSL3-215ENST00000482871 DHX16O60231 1041 aaKnown RBP9.09□□□□□ -0.95
MSL3-215ENST00000482871 USP2O75604 605 aaPredicted RBP9.09□□□□□ -0.95
MSL3-215ENST00000482871 LARGE1O95461 756 aa9.09□□□□□ -0.95
MSL3-215ENST00000482871 ASMTLO95671 621 aa9.09□□□□□ -0.95
MSL3-215ENST00000482871 CPA1P15085 419 aa9.09□□□□□ -0.95
MSL3-215ENST00000482871 HUNKP57058 714 aa9.09□□□□□ -0.95
MSL3-215ENST00000482871 PPP2R5EQ16537 467 aa9.09□□□□□ -0.95
MSL3-215ENST00000482871 IMMTQ16891 758 aaKnown RBP9.09□□□□□ -0.95
MSL3-215ENST00000482871 FOXD4L6Q3SYB3 417 aaPredicted RBP9.09□□□□□ -0.95
MSL3-215ENST00000482871 ATL3Q6DD88 541 aa9.09□□□□□ -0.95
MSL3-215ENST00000482871 FOXD4L3Q6VB84 417 aaPredicted RBP9.09□□□□□ -0.95
MSL3-215ENST00000482871 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.09□□□□□ -0.95
MSL3-215ENST00000482871 Q6ZUG5 572 aa9.09□□□□□ -0.95
MSL3-215ENST00000482871 SPATC1Q76KD6 591 aa9.09□□□□□ -0.95
MSL3-215ENST00000482871 IFNL3Q8IZI9 196 aa9.09□□□□□ -0.95
MSL3-215ENST00000482871 ST13P5Q8NFI4 369 aaPredicted RBP9.09□□□□□ -0.95
MSL3-215ENST00000482871 NXPE3Q969Y0 559 aa9.09□□□□□ -0.95
MSL3-215ENST00000482871 LPIN3Q9BQK8 851 aa9.09□□□□□ -0.95
MSL3-215ENST00000482871 NAPBQ9H115 298 aa9.09□□□□□ -0.95
MSL3-215ENST00000482871 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.09□□□□□ -0.95
MSL3-215ENST00000482871 DDX19AQ9NUU7 478 aaKnown RBP9.09□□□□□ -0.95
MSL3-215ENST00000482871 PFDN2Q9UHV9 154 aa9.09□□□□□ -0.95
MSL3-215ENST00000482871 SERPINB13Q9UIV8 391 aa9.09□□□□□ -0.95
MSL3-215ENST00000482871 CFAP45Q9UL16 551 aa9.09□□□□□ -0.95
MSL3-215ENST00000482871 ATAD5Q96QE3 1844 aa9.09□□□□□ -0.95
MSL3-215ENST00000482871 WDR19Q8NEZ3 1342 aa9.08□□□□□ -0.96
MSL3-215ENST00000482871 SIPA1L1O43166 1804 aa9.08□□□□□ -0.96
MSL3-215ENST00000482871 DDAH1O94760 285 aa9.08□□□□□ -0.96
MSL3-215ENST00000482871 TPM3P06753 285 aa9.08□□□□□ -0.96
MSL3-215ENST00000482871 SLC3A2P08195 630 aaKnown RBP9.08□□□□□ -0.96
MSL3-215ENST00000482871 CCDC192P0DO97 292 aa9.08□□□□□ -0.96
MSL3-215ENST00000482871 CYP2D6P10635 497 aa9.08□□□□□ -0.96
MSL3-215ENST00000482871 HSPD1P10809 573 aaKnown RBP9.08□□□□□ -0.96
MSL3-215ENST00000482871 PLCD1P51178 756 aa9.08□□□□□ -0.96
MSL3-215ENST00000482871 TOB2Q14106 344 aaPredicted RBP9.08□□□□□ -0.96
MSL3-215ENST00000482871 C12orf60Q5U649 245 aa9.08□□□□□ -0.96
MSL3-215ENST00000482871 CTR9Q6PD62 1173 aa9.08□□□□□ -0.96
MSL3-215ENST00000482871 RALYLQ86SE5 291 aaKnown RBP9.08□□□□□ -0.96
MSL3-215ENST00000482871 SAPCD2Q86UD0 394 aa9.08□□□□□ -0.96
MSL3-215ENST00000482871 NECAB1Q8N987 351 aa9.08□□□□□ -0.96
MSL3-215ENST00000482871 C19orf47Q8N9M1 422 aaKnown RBP9.08□□□□□ -0.96
MSL3-215ENST00000482871 ZNF669Q96BR6 464 aaPredicted RBP9.08□□□□□ -0.96
MSL3-215ENST00000482871 PDLIM2Q96JY6 352 aa9.08□□□□□ -0.96
MSL3-215ENST00000482871 ZNF396Q96N95 335 aaPredicted RBP9.08□□□□□ -0.96
MSL3-215ENST00000482871 HHIPQ96QV1 700 aa9.08□□□□□ -0.96
MSL3-215ENST00000482871 WRNIP1Q96S55 665 aa9.08□□□□□ -0.96
MSL3-215ENST00000482871 CEP89Q96ST8 783 aa9.08□□□□□ -0.96
MSL3-215ENST00000482871 PLVAPQ9BX97 442 aa9.08□□□□□ -0.96
MSL3-215ENST00000482871 RRAGDQ9NQL2 400 aaPredicted RBP9.08□□□□□ -0.96
MSL3-215ENST00000482871 ARPP21Q9UBL0 812 aaPredicted RBP9.08□□□□□ -0.96
MSL3-215ENST00000482871 HERC5Q9UII4 1024 aaKnown RBP9.08□□□□□ -0.96
MSL3-215ENST00000482871 ZMYM5Q9UJ78 669 aa9.08□□□□□ -0.96
MSL3-215ENST00000482871 CYP8B1Q9UNU6 501 aa9.08□□□□□ -0.96
MSL3-215ENST00000482871 CSADQ9Y600 493 aa9.08□□□□□ -0.96
MSL3-215ENST00000482871 LAMB1P07942 1786 aa9.08□□□□□ -0.96
MSL3-215ENST00000482871 OTOFQ9HC10 1997 aa9.08□□□□□ -0.96
MSL3-215ENST00000482871 SSC5DA1L4H1 1573 aa9.07□□□□□ -0.96
MSL3-215ENST00000482871 CYP2D7A0A087X1C5 515 aa9.07□□□□□ -0.96
MSL3-215ENST00000482871 GOLGA6L6A8MZA4 724 aa9.07□□□□□ -0.96
MSL3-215ENST00000482871 PFKFB2O60825 505 aa9.07□□□□□ -0.96
MSL3-215ENST00000482871 CAVIN2O95810 425 aa9.07□□□□□ -0.96
MSL3-215ENST00000482871 BPNT1O95861 308 aa9.07□□□□□ -0.96
MSL3-215ENST00000482871 FGAP02671 866 aa9.07□□□□□ -0.96
MSL3-215ENST00000482871 CYP21A2P08686 494 aa9.07□□□□□ -0.96
MSL3-215ENST00000482871 BMP6P22004 513 aa9.07□□□□□ -0.96
MSL3-215ENST00000482871 ZNF157P51786 506 aaPredicted RBP9.07□□□□□ -0.96
MSL3-215ENST00000482871 HTRA3P83110 453 aa9.07□□□□□ -0.96
MSL3-215ENST00000482871 PPP2R3AQ06190 1150 aa9.07□□□□□ -0.96
MSL3-215ENST00000482871 SSRP1Q08945 709 aaKnown RBP9.07□□□□□ -0.96
MSL3-215ENST00000482871 KCNMA1Q12791 1236 aa9.07□□□□□ -0.96
MSL3-215ENST00000482871 TRDNQ13061 729 aa9.07□□□□□ -0.96
MSL3-215ENST00000482871 GRM1Q13255 1194 aa9.07□□□□□ -0.96
MSL3-215ENST00000482871 DEFB115Q30KQ5 88 aa9.07□□□□□ -0.96
MSL3-215ENST00000482871 SBK1Q52WX2 424 aa9.07□□□□□ -0.96
MSL3-215ENST00000482871 RASIP1Q5U651 963 aa9.07□□□□□ -0.96
MSL3-215ENST00000482871 STK11IPQ8N1F8 1099 aa9.07□□□□□ -0.96
MSL3-215ENST00000482871 ASAP3Q8TDY4 903 aa9.07□□□□□ -0.96
MSL3-215ENST00000482871 TRIM11Q96F44 468 aa9.07□□□□□ -0.96
MSL3-215ENST00000482871 NAP1L5Q96NT1 182 aaPredicted RBP9.07□□□□□ -0.96
MSL3-215ENST00000482871 NUP62CLQ9H1M0 184 aa9.07□□□□□ -0.96
MSL3-215ENST00000482871 EHMT1Q9H9B1 1298 aa9.07□□□□□ -0.96
MSL3-215ENST00000482871 EPB41L4AQ9HCS5 686 aaPredicted RBP9.07□□□□□ -0.96
MSL3-215ENST00000482871 NOP53Q9NZM5 478 aaKnown RBP9.07□□□□□ -0.96
MSL3-215ENST00000482871 FRRS1LQ9P0K9 344 aa9.07□□□□□ -0.96
MSL3-215ENST00000482871 DDX60LQ5H9U9 1706 aaKnown RBP9.07□□□□□ -0.96
MSL3-215ENST00000482871 LOC100996750A0A140TA64 210 aa9.06□□□□□ -0.96
MSL3-215ENST00000482871 CTNND1O60716 968 aaKnown RBP9.06□□□□□ -0.96
MSL3-215ENST00000482871 PEX14O75381 377 aa9.06□□□□□ -0.96
MSL3-215ENST00000482871 STK3Q13188 491 aa9.06□□□□□ -0.96
MSL3-215ENST00000482871 ALX1Q15699 326 aa9.06□□□□□ -0.96
MSL3-215ENST00000482871 RGMBQ6NW40 437 aa9.06□□□□□ -0.96
MSL3-215ENST00000482871 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.06□□□□□ -0.96
MSL3-215ENST00000482871 EXOC8Q8IYI6 725 aa9.06□□□□□ -0.96
MSL3-215ENST00000482871 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.06□□□□□ -0.96
MSL3-215ENST00000482871 BICD2Q8TD16 824 aa9.06□□□□□ -0.96
MSL3-215ENST00000482871 BRF1Q92994 677 aa9.06□□□□□ -0.96
MSL3-215ENST00000482871 ZKSCAN4Q969J2 545 aaPredicted RBP9.06□□□□□ -0.96
MSL3-215ENST00000482871 DYNLL2Q96FJ2 89 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms