RNA–Protein interactions for RNA: ENST00000482632.5

SPTLC1-206, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 837 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-206ENST00000482632 TTC38Q5R3I4 469 aa11.25□□□□□ -0.61
SPTLC1-206ENST00000482632 C9orf50Q5SZB4 431 aa11.25□□□□□ -0.61
SPTLC1-206ENST00000482632 PLPPR4Q7Z2D5 763 aa11.25□□□□□ -0.61
SPTLC1-206ENST00000482632 SLFN12Q8IYM2 578 aa11.25□□□□□ -0.61
SPTLC1-206ENST00000482632 BANK1Q8NDB2 785 aa11.25□□□□□ -0.61
SPTLC1-206ENST00000482632 DHX38Q92620 1227 aaKnown RBP11.25□□□□□ -0.61
SPTLC1-206ENST00000482632 ZBTB10Q96DT7 871 aa11.25□□□□□ -0.61
SPTLC1-206ENST00000482632 FAM20AQ96MK3 541 aa11.25□□□□□ -0.61
SPTLC1-206ENST00000482632 MBOAT7Q96N66 472 aa11.25□□□□□ -0.61
SPTLC1-206ENST00000482632 FAM49AQ9H0Q0 323 aaPredicted RBP11.25□□□□□ -0.61
SPTLC1-206ENST00000482632 NRCAMQ92823 1304 aa11.25□□□□□ -0.61
SPTLC1-206ENST00000482632 SPTBN5Q9NRC6 3674 aaKnown RBP11.25□□□□□ -0.61
SPTLC1-206ENST00000482632 TET1Q8NFU7 2136 aa11.24□□□□□ -0.61
SPTLC1-206ENST00000482632 RRN3P2A6NIE6 340 aa11.24□□□□□ -0.61
SPTLC1-206ENST00000482632 HBP1O60381 514 aa11.24□□□□□ -0.61
SPTLC1-206ENST00000482632 CKBP12277 381 aa11.24□□□□□ -0.61
SPTLC1-206ENST00000482632 SELPP16109 830 aa11.24□□□□□ -0.61
SPTLC1-206ENST00000482632 SLC26A2P50443 739 aa11.24□□□□□ -0.61
SPTLC1-206ENST00000482632 EPHB4P54760 987 aa11.24□□□□□ -0.61
SPTLC1-206ENST00000482632 PRKCEQ02156 737 aa11.24□□□□□ -0.61
SPTLC1-206ENST00000482632 CUL4AQ13619 759 aa11.24□□□□□ -0.61
SPTLC1-206ENST00000482632 UGCGQ16739 394 aa11.24□□□□□ -0.61
SPTLC1-206ENST00000482632 ZNF618Q5T7W0 954 aa11.24□□□□□ -0.61
SPTLC1-206ENST00000482632 GPR153Q6NV75 609 aa11.24□□□□□ -0.61
SPTLC1-206ENST00000482632 RUFY4Q6ZNE9 571 aa11.24□□□□□ -0.61
SPTLC1-206ENST00000482632 ZNF365Q70YC5 407 aa11.24□□□□□ -0.61
SPTLC1-206ENST00000482632 LRRC8DQ7L1W4 858 aa11.24□□□□□ -0.61
SPTLC1-206ENST00000482632 RSPH3Q86UC2 560 aa11.24□□□□□ -0.61
SPTLC1-206ENST00000482632 SERINC5Q86VE9 423 aa11.24□□□□□ -0.61
SPTLC1-206ENST00000482632 RPUSD2Q8IZ73 545 aaKnown RBP11.24□□□□□ -0.61
SPTLC1-206ENST00000482632 AFAP1L1Q8TED9 768 aa11.24□□□□□ -0.61
SPTLC1-206ENST00000482632 ATP8B4Q8TF62 1192 aa11.24□□□□□ -0.61
SPTLC1-206ENST00000482632 WNT8BQ93098 351 aa11.24□□□□□ -0.61
SPTLC1-206ENST00000482632 FAM167AQ96KS9 214 aa11.24□□□□□ -0.61
SPTLC1-206ENST00000482632 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.24□□□□□ -0.611e-6■□□□□ 8.5
SPTLC1-206ENST00000482632 KCNMB3Q9NPA1 279 aa11.24□□□□□ -0.61
SPTLC1-206ENST00000482632 IL23AQ9NPF7 189 aa11.24□□□□□ -0.61
SPTLC1-206ENST00000482632 SEPT9Q9UHD8 586 aaPredicted RBP11.24□□□□□ -0.61
SPTLC1-206ENST00000482632 GBF1Q92538 1859 aa11.23□□□□□ -0.61
SPTLC1-206ENST00000482632 IGKV6D-21A0A0A0MT36 114 aa11.23□□□□□ -0.61
SPTLC1-206ENST00000482632 DDX11L8A8MPP1 907 aa11.23□□□□□ -0.61
SPTLC1-206ENST00000482632 M0QZ92 97 aa11.23□□□□□ -0.61
SPTLC1-206ENST00000482632 EML1O00423 815 aa11.23□□□□□ -0.61
SPTLC1-206ENST00000482632 SOX1O00570 391 aaPredicted RBP11.23□□□□□ -0.61
SPTLC1-206ENST00000482632 TBX3O15119 743 aa11.23□□□□□ -0.61
SPTLC1-206ENST00000482632 GPR37O15354 613 aa11.23□□□□□ -0.61
SPTLC1-206ENST00000482632 FGBP02675 491 aa11.23□□□□□ -0.61
SPTLC1-206ENST00000482632 OATP04181 439 aa11.23□□□□□ -0.61
SPTLC1-206ENST00000482632 NUDT7P0C024 238 aa11.23□□□□□ -0.61
SPTLC1-206ENST00000482632 IQCF3P0C7M6 154 aa11.23□□□□□ -0.61
SPTLC1-206ENST00000482632 PDCP20941 246 aa11.23□□□□□ -0.61
SPTLC1-206ENST00000482632 CYP4A11Q02928 519 aa11.23□□□□□ -0.61
SPTLC1-206ENST00000482632 TMEM62Q0P6H9 643 aa11.23□□□□□ -0.61
SPTLC1-206ENST00000482632 MTERF2Q49AM1 385 aa11.23□□□□□ -0.61
SPTLC1-206ENST00000482632 PSRC1Q6PGN9 363 aaPredicted RBP11.23□□□□□ -0.61
SPTLC1-206ENST00000482632 OTOP2Q7RTS6 562 aa11.23□□□□□ -0.61
SPTLC1-206ENST00000482632 FERMT3Q86UX7 667 aa11.23□□□□□ -0.61
SPTLC1-206ENST00000482632 METTL13Q8N6R0 699 aa11.23□□□□□ -0.61
SPTLC1-206ENST00000482632 RDM1Q8NG50 284 aa11.23□□□□□ -0.61
SPTLC1-206ENST00000482632 DNAJB3Q8WWF6 145 aa11.23□□□□□ -0.61
SPTLC1-206ENST00000482632 HAS1Q92839 578 aa11.23□□□□□ -0.61
SPTLC1-206ENST00000482632 CCDC43Q96MW1 224 aaKnown RBP11.23□□□□□ -0.61
SPTLC1-206ENST00000482632 CTAGE1Q96RT6 745 aa11.23□□□□□ -0.61
SPTLC1-206ENST00000482632 PPP1R16BQ96T49 567 aa11.23□□□□□ -0.61
SPTLC1-206ENST00000482632 MTIF3Q9H2K0 278 aaKnown RBP11.23□□□□□ -0.61
SPTLC1-206ENST00000482632 TMEM60Q9H2L4 133 aa11.23□□□□□ -0.61
SPTLC1-206ENST00000482632 TTC12Q9H892 705 aaPredicted RBP11.23□□□□□ -0.61
SPTLC1-206ENST00000482632 NRBP2Q9NSY0 501 aa11.23□□□□□ -0.61
SPTLC1-206ENST00000482632 PCDHA12Q9UN75 941 aa11.23□□□□□ -0.61
SPTLC1-206ENST00000482632 IGSF9BQ9UPX0 1349 aa11.23□□□□□ -0.61
SPTLC1-206ENST00000482632 SIP14410 1827 aa11.23□□□□□ -0.61
SPTLC1-206ENST00000482632 ARID2Q68CP9 1835 aa11.23□□□□□ -0.61
SPTLC1-206ENST00000482632 A0A1W2PPC1 479 aa11.22□□□□□ -0.61
SPTLC1-206ENST00000482632 RSPH10B2B2RC85 870 aa11.22□□□□□ -0.61
SPTLC1-206ENST00000482632 RBAK-RBAKDNI3L0D1 243 aa11.22□□□□□ -0.61
SPTLC1-206ENST00000482632 OR52Z1P0C646 297 aa11.22□□□□□ -0.61
SPTLC1-206ENST00000482632 RSPH10BP0C881 870 aa11.22□□□□□ -0.61
SPTLC1-206ENST00000482632 ACTN1P12814 892 aa11.22□□□□□ -0.61
SPTLC1-206ENST00000482632 U2AF2P26368 475 aaKnown RBP eCLIP11.22□□□□□ -0.613e-6■■■□□ 15.4
SPTLC1-206ENST00000482632 KLRC1P26715 233 aa11.22□□□□□ -0.61
SPTLC1-206ENST00000482632 PPP2R5CQ13362 524 aa11.22□□□□□ -0.61
SPTLC1-206ENST00000482632 TMEM266Q2M3C6 531 aa11.22□□□□□ -0.61
SPTLC1-206ENST00000482632 TMEM240Q5SV17 173 aa11.22□□□□□ -0.61
SPTLC1-206ENST00000482632 KHSRPQ92945 711 aaKnown RBP eCLIP11.22□□□□□ -0.612e-7■□□□□ 10.5
SPTLC1-206ENST00000482632 SNX21Q969T3 373 aa11.22□□□□□ -0.61
SPTLC1-206ENST00000482632 LRCH3Q96II8 777 aa11.22□□□□□ -0.61
SPTLC1-206ENST00000482632 DYDC2Q96IM9 177 aa11.22□□□□□ -0.61
SPTLC1-206ENST00000482632 PRO3102Q9H379 93 aa11.22□□□□□ -0.61
SPTLC1-206ENST00000482632 SLC24A3Q9HC58 644 aa11.22□□□□□ -0.61
SPTLC1-206ENST00000482632 VAV3Q9UKW4 847 aa11.22□□□□□ -0.61
SPTLC1-206ENST00000482632 GINS2Q9Y248 185 aa11.22□□□□□ -0.61
SPTLC1-206ENST00000482632 PCDHGA10Q9Y5H3 936 aa11.22□□□□□ -0.61
SPTLC1-206ENST00000482632 MAFBQ9Y5Q3 323 aaPredicted RBP11.22□□□□□ -0.61
SPTLC1-206ENST00000482632 MYH15Q9Y2K3 1946 aa11.21□□□□□ -0.61
SPTLC1-206ENST00000482632 COL1A2P08123 1366 aa11.21□□□□□ -0.61
SPTLC1-206ENST00000482632 TMEM150BA6NC51 233 aa11.21□□□□□ -0.61
SPTLC1-206ENST00000482632 ZNF862O60290 1169 aa11.21□□□□□ -0.61
SPTLC1-206ENST00000482632 DKC1O60832 514 aaKnown RBP eCLIP11.21□□□□□ -0.61
SPTLC1-206ENST00000482632 ATP4AP20648 1035 aa11.21□□□□□ -0.61
SPTLC1-206ENST00000482632 HOXC8P31273 242 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms